RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 BCL2L2Q92843 193 aaPredicted RBP9.37□□□□□ -0.91
DDX56-203ENST00000421223 NAA60Q9H7X0 242 aa9.37□□□□□ -0.91
DDX56-203ENST00000421223 DUX4Q9UBX2 424 aa9.37□□□□□ -0.91
DDX56-203ENST00000421223 ZNF705EA8MWA4 302 aaPredicted RBP9.37□□□□□ -0.91
DDX56-203ENST00000421223 TK1P04183 234 aa9.37□□□□□ -0.91
DDX56-203ENST00000421223 RPL12P30050 165 aaKnown RBP9.37□□□□□ -0.91
DDX56-203ENST00000421223 PCP4P48539 62 aa9.37□□□□□ -0.91
DDX56-203ENST00000421223 SURF2Q15527 256 aaPredicted RBP9.37□□□□□ -0.91
DDX56-203ENST00000421223 TBC1D28Q2M2D7 210 aa9.37□□□□□ -0.91
DDX56-203ENST00000421223 TMEM268Q5VZI3 342 aa9.37□□□□□ -0.91
DDX56-203ENST00000421223 SYT3Q9BQG1 590 aa9.37□□□□□ -0.91
DDX56-203ENST00000421223 GLS2Q9UI32 602 aa9.37□□□□□ -0.91
DDX56-203ENST00000421223 APC2O95996 2303 aa9.37□□□□□ -0.91
DDX56-203ENST00000421223 INTS1Q8N201 2190 aaKnown RBP9.37□□□□□ -0.91
DDX56-203ENST00000421223 CDIPTO14735 213 aa9.37□□□□□ -0.91
DDX56-203ENST00000421223 SLC34A2O95436 690 aa9.37□□□□□ -0.91
DDX56-203ENST00000421223 PET100P0DJ07 73 aa9.37□□□□□ -0.91
DDX56-203ENST00000421223 TGFBR3Q03167 851 aa9.37□□□□□ -0.91
DDX56-203ENST00000421223 NRN1LQ496H8 165 aa9.37□□□□□ -0.91
DDX56-203ENST00000421223 VWA1Q6PCB0 445 aa9.37□□□□□ -0.91
DDX56-203ENST00000421223 DHRS11Q6UWP2 260 aa9.37□□□□□ -0.91
DDX56-203ENST00000421223 OR1J1Q8NGS3 322 aa9.37□□□□□ -0.91
DDX56-203ENST00000421223 SLC5A7Q9GZV3 580 aa9.37□□□□□ -0.91
DDX56-203ENST00000421223 DNTTIP1Q9H147 329 aa9.37□□□□□ -0.91
DDX56-203ENST00000421223 ESRP2Q9H6T0 727 aaKnown RBP9.37□□□□□ -0.91
DDX56-203ENST00000421223 A0A1B0GV50 99 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 MED19A0JLT2 244 aaPredicted RBP9.36□□□□□ -0.91
DDX56-203ENST00000421223 RRP8O43159 456 aaKnown RBP9.36□□□□□ -0.91
DDX56-203ENST00000421223 CA11O75493 328 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 IGHV1-2P23083 117 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 OMGP23515 440 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 GNRHRP30968 328 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 HOXC12P31275 282 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 FABP6P51161 128 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 FGF12P61328 243 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 GNG3P63215 75 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 FBXW12Q6X9E4 464 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 SUMF2Q8NBJ7 301 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 OR5A2Q8NGI9 324 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 OR52M1Q8NGK5 317 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 CNTNAP3BQ96NU0 1288 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 TECTBQ96PL2 329 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 TP53RKQ96S44 253 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 CNTNAP3Q9BZ76 1288 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 MAGT1Q9H0U3 335 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 OBP2BQ9NPH6 170 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 UFSP2Q9NUQ7 469 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 ZNF292O60281 2723 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 A6NLC8 198 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 DEGS1O15121 323 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 HSPA12AO43301 675 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 RAC2P15153 192 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 PPP1CBP62140 327 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 DAZAP2Q15038 168 aaPredicted RBP9.36□□□□□ -0.91
DDX56-203ENST00000421223 TMEM211Q6ICI0 200 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 C20orf204Q6ZNR8 217 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 FAM58AQ8N1B3 248 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 BPIFCQ8NFQ6 507 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 SLC25A40Q8TBP6 338 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 GLYATL2Q8WU03 294 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 OR5P3Q8WZ94 311 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 CCL28Q9NRJ3 127 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 TINAGQ9UJW2 476 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 SPTA1P02549 2419 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 AKAP13Q12802 2813 aa9.36□□□□□ -0.91
DDX56-203ENST00000421223 TFF1P04155 84 aa9.35□□□□□ -0.91
DDX56-203ENST00000421223 CEBPDP49716 269 aaPredicted RBP9.35□□□□□ -0.91
DDX56-203ENST00000421223 FOXF2Q12947 444 aa9.35□□□□□ -0.91
DDX56-203ENST00000421223 ZNF273Q14593 569 aa9.35□□□□□ -0.91
DDX56-203ENST00000421223 ZNF573Q86YE8 665 aa9.35□□□□□ -0.91
DDX56-203ENST00000421223 GAPTQ8N292 157 aa9.35□□□□□ -0.91
DDX56-203ENST00000421223 OR51H1Q8NH63 302 aa9.35□□□□□ -0.91
DDX56-203ENST00000421223 PHYHIPLQ96FC7 376 aa9.35□□□□□ -0.91
DDX56-203ENST00000421223 RNF122Q9H9V4 155 aa9.35□□□□□ -0.91
DDX56-203ENST00000421223 TREM1Q9NP99 234 aa9.35□□□□□ -0.91
DDX56-203ENST00000421223 IL36GQ9NZH8 169 aa9.35□□□□□ -0.91
DDX56-203ENST00000421223 TNRC6AQ8NDV7 1962 aaKnown RBP9.35□□□□□ -0.91
DDX56-203ENST00000421223 CEP295Q9C0D2 2601 aa9.35□□□□□ -0.91
DDX56-203ENST00000421223 IGKV1D-13A0A0B4J2D9 117 aa9.35□□□□□ -0.91
DDX56-203ENST00000421223 H0YL77 283 aa9.35□□□□□ -0.91
DDX56-203ENST00000421223 MBPP02686 304 aaPredicted RBP9.35□□□□□ -0.91
DDX56-203ENST00000421223 IGKV1-13P0DP09 117 aa9.35□□□□□ -0.91
DDX56-203ENST00000421223 EPHA1P21709 976 aa9.35□□□□□ -0.91
DDX56-203ENST00000421223 ECI1P42126 302 aa9.35□□□□□ -0.91
DDX56-203ENST00000421223 MRPL49Q13405 166 aaKnown RBP9.35□□□□□ -0.91
DDX56-203ENST00000421223 TMEM187Q14656 261 aa9.35□□□□□ -0.91
DDX56-203ENST00000421223 ATRAIDQ6UW56 229 aa9.35□□□□□ -0.91
DDX56-203ENST00000421223 ZNF826PQ6ZT77 177 aa9.35□□□□□ -0.91
DDX56-203ENST00000421223 DPPA2Q7Z7J5 298 aa9.35□□□□□ -0.91
DDX56-203ENST00000421223 ZNF695Q8IW36 515 aa9.35□□□□□ -0.91
DDX56-203ENST00000421223 BSCL2Q96G97 398 aaPredicted RBP9.35□□□□□ -0.91
DDX56-203ENST00000421223 PRRX2Q99811 253 aa9.35□□□□□ -0.91
DDX56-203ENST00000421223 BCL2L14Q9BZR8 327 aa9.35□□□□□ -0.91
DDX56-203ENST00000421223 TAF9BQ9HBM6 251 aa9.35□□□□□ -0.91
DDX56-203ENST00000421223 CYTL1Q9NRR1 136 aa9.35□□□□□ -0.91
DDX56-203ENST00000421223 NXPH2O95156 264 aa9.34□□□□□ -0.91
DDX56-203ENST00000421223 CST4P01036 141 aa9.34□□□□□ -0.91
DDX56-203ENST00000421223 COX5BP10606 129 aa9.34□□□□□ -0.91
DDX56-203ENST00000421223 ID4P47928 161 aa9.34□□□□□ -0.91
DDX56-203ENST00000421223 TMEM33P57088 247 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms