RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 CORTO00230 105 aa10.89□□□□□ -0.67
CLCN4-203ENST00000421085 DDTP30046 118 aa10.89□□□□□ -0.67
CLCN4-203ENST00000421085 OR1L3Q8NH93 324 aa10.89□□□□□ -0.67
CLCN4-203ENST00000421085 UFC1Q9Y3C8 167 aa10.89□□□□□ -0.67
CLCN4-203ENST00000421085 KIF13AQ9H1H9 1805 aa10.89□□□□□ -0.67
CLCN4-203ENST00000421085 ANKRD55Q3KP44 614 aa10.89□□□□□ -0.67
CLCN4-203ENST00000421085 SIRT4Q9Y6E7 314 aaPredicted RBP10.89□□□□□ -0.67
CLCN4-203ENST00000421085 CXorf51AA0A1B0GTR3 108 aa10.89□□□□□ -0.67
CLCN4-203ENST00000421085 A0A1W2PN81 502 aa10.89□□□□□ -0.67
CLCN4-203ENST00000421085 OR2T8A6NH00 312 aa10.89□□□□□ -0.67
CLCN4-203ENST00000421085 PRRG2O14669 202 aa10.89□□□□□ -0.67
CLCN4-203ENST00000421085 HOXA6P31267 233 aa10.89□□□□□ -0.67
CLCN4-203ENST00000421085 GZMMP51124 257 aa10.89□□□□□ -0.67
CLCN4-203ENST00000421085 ADAT3Q96EY9 351 aaPredicted RBP10.89□□□□□ -0.67
CLCN4-203ENST00000421085 GPA33Q99795 319 aa10.89□□□□□ -0.67
CLCN4-203ENST00000421085 OR5AC2Q9NZP5 309 aa10.89□□□□□ -0.67
CLCN4-203ENST00000421085 MELTFP08582 738 aa10.88□□□□□ -0.67
CLCN4-203ENST00000421085 SPINK2P20155 84 aa10.88□□□□□ -0.67
CLCN4-203ENST00000421085 HINT1P49773 126 aaPredicted RBP10.88□□□□□ -0.67
CLCN4-203ENST00000421085 SKP2Q13309 424 aa10.88□□□□□ -0.67
CLCN4-203ENST00000421085 HSPB9Q9BQS6 159 aa10.88□□□□□ -0.67
CLCN4-203ENST00000421085 ALX4Q9H161 411 aaPredicted RBP10.88□□□□□ -0.67
CLCN4-203ENST00000421085 TMEM140Q9NV12 185 aa10.88□□□□□ -0.67
CLCN4-203ENST00000421085 SPTY2D1-AS1A0A0U1RR47 76 aa10.88□□□□□ -0.67
CLCN4-203ENST00000421085 VSIG8P0DPA2 414 aa10.88□□□□□ -0.67
CLCN4-203ENST00000421085 TMEM50BP56557 158 aa10.88□□□□□ -0.67
CLCN4-203ENST00000421085 PAFAH1B2P68402 229 aa10.88□□□□□ -0.67
CLCN4-203ENST00000421085 C1QL3Q5VWW1 255 aa10.88□□□□□ -0.67
CLCN4-203ENST00000421085 C16orf47Q6ZP98 133 aaPredicted RBP10.88□□□□□ -0.67
CLCN4-203ENST00000421085 LDLRAD3Q86YD5 345 aa10.88□□□□□ -0.67
CLCN4-203ENST00000421085 OR1K1Q8NGR3 316 aa10.88□□□□□ -0.67
CLCN4-203ENST00000421085 MRPS18AQ9NVS2 196 aaKnown RBP10.88□□□□□ -0.67
CLCN4-203ENST00000421085 OR6C3Q9NZP0 311 aa10.88□□□□□ -0.67
CLCN4-203ENST00000421085 LILRA5A6NI73 299 aa10.88□□□□□ -0.67
CLCN4-203ENST00000421085 SMPD2O60906 423 aa10.88□□□□□ -0.67
CLCN4-203ENST00000421085 CXorf65A6NEN9 183 aa10.88□□□□□ -0.67
CLCN4-203ENST00000421085 PITX3O75364 302 aa10.88□□□□□ -0.67
CLCN4-203ENST00000421085 CDS2O95674 445 aa10.88□□□□□ -0.67
CLCN4-203ENST00000421085 CYB5R3P00387 301 aaPredicted RBP10.88□□□□□ -0.67
CLCN4-203ENST00000421085 ZIC1Q15915 447 aa10.88□□□□□ -0.67
CLCN4-203ENST00000421085 MRGPRFQ96AM1 343 aa10.88□□□□□ -0.67
CLCN4-203ENST00000421085 GCGP01275 180 aa10.88□□□□□ -0.67
CLCN4-203ENST00000421085 TCTAP57738 103 aa10.88□□□□□ -0.67
CLCN4-203ENST00000421085 SPATA45Q537H7 98 aa10.88□□□□□ -0.67
CLCN4-203ENST00000421085 VN1R4Q7Z5H5 301 aa10.88□□□□□ -0.67
CLCN4-203ENST00000421085 FLYWCH2Q96CP2 140 aaKnown RBP10.88□□□□□ -0.67
CLCN4-203ENST00000421085 COL8A1P27658 744 aa10.87□□□□□ -0.67
CLCN4-203ENST00000421085 RIGQ13278 110 aa10.87□□□□□ -0.67
CLCN4-203ENST00000421085 WDR74Q6RFH5 385 aaPredicted RBP10.87□□□□□ -0.67
CLCN4-203ENST00000421085 SEBOXQ9HB31 216 aaPredicted RBP10.87□□□□□ -0.67
CLCN4-203ENST00000421085 CTXND1A0A1B0GTU2 59 aa10.87□□□□□ -0.67
CLCN4-203ENST00000421085 IGSF23A1L1A6 192 aa10.87□□□□□ -0.67
CLCN4-203ENST00000421085 SRSF9Q13242 221 aaKnown RBP eCLIP10.87□□□□□ -0.67
CLCN4-203ENST00000421085 ZNF343Q6P1L6 599 aa10.87□□□□□ -0.67
CLCN4-203ENST00000421085 SGMS2Q8NHU3 365 aa10.87□□□□□ -0.67
CLCN4-203ENST00000421085 NRTNQ99748 197 aa10.87□□□□□ -0.67
CLCN4-203ENST00000421085 LOXL2Q9Y4K0 774 aa10.87□□□□□ -0.67
CLCN4-203ENST00000421085 RNF224P0DH78 156 aa10.87□□□□□ -0.67
CLCN4-203ENST00000421085 CD40P25942 277 aa10.87□□□□□ -0.67
CLCN4-203ENST00000421085 BRS3P32247 399 aa10.87□□□□□ -0.67
CLCN4-203ENST00000421085 PCP4P48539 62 aa10.87□□□□□ -0.67
CLCN4-203ENST00000421085 MGAT2Q10469 447 aa10.87□□□□□ -0.67
CLCN4-203ENST00000421085 ZNF362Q5T0B9 420 aaPredicted RBP10.87□□□□□ -0.67
CLCN4-203ENST00000421085 ATG4DQ86TL0 474 aaPredicted RBP10.87□□□□□ -0.67
CLCN4-203ENST00000421085 SMDT1Q9H4I9 107 aa10.87□□□□□ -0.67
CLCN4-203ENST00000421085 ISLRO14498 428 aa10.87□□□□□ -0.67
CLCN4-203ENST00000421085 CXorf1O96002 111 aa10.87□□□□□ -0.67
CLCN4-203ENST00000421085 FOXO1Q12778 655 aa10.87□□□□□ -0.67
CLCN4-203ENST00000421085 TGIF2LYQ8IUE0 185 aa10.87□□□□□ -0.67
CLCN4-203ENST00000421085 WDFY1Q8IWB7 410 aa10.87□□□□□ -0.67
CLCN4-203ENST00000421085 OR11G2Q8NGC1 345 aa10.87□□□□□ -0.67
CLCN4-203ENST00000421085 TMEM204Q9BSN7 226 aa10.87□□□□□ -0.67
CLCN4-203ENST00000421085 MFRPQ9BY79 579 aa10.87□□□□□ -0.67
CLCN4-203ENST00000421085 TTC3P53804 2025 aa10.87□□□□□ -0.67
CLCN4-203ENST00000421085 BCL2P10415 239 aa10.87□□□□□ -0.67
CLCN4-203ENST00000421085 ZNF547Q8IVP9 402 aa10.87□□□□□ -0.67
CLCN4-203ENST00000421085 OR2M3Q8NG83 312 aa10.87□□□□□ -0.67
CLCN4-203ENST00000421085 OR4A4PQ8NGN8 299 aa10.87□□□□□ -0.67
CLCN4-203ENST00000421085 LRRC29Q8WV35 223 aa10.87□□□□□ -0.67
CLCN4-203ENST00000421085 MEOX1P50221 254 aa10.86□□□□□ -0.67
CLCN4-203ENST00000421085 ZNF137PP52743 207 aa10.86□□□□□ -0.67
CLCN4-203ENST00000421085 CCL7P80098 99 aa10.86□□□□□ -0.67
CLCN4-203ENST00000421085 CST9Q5W186 159 aa10.86□□□□□ -0.67
CLCN4-203ENST00000421085 PTCRAQ6ISU1 281 aaPredicted RBP10.86□□□□□ -0.67
CLCN4-203ENST00000421085 OR4S2Q8NH73 311 aa10.86□□□□□ -0.67
CLCN4-203ENST00000421085 OR6X1Q8NH79 312 aa10.86□□□□□ -0.67
CLCN4-203ENST00000421085 TLNRD1Q9H1K6 362 aa10.86□□□□□ -0.67
CLCN4-203ENST00000421085 ONECUT1Q9UBC0 465 aa10.86□□□□□ -0.67
CLCN4-203ENST00000421085 A0A1B0GV90 55 aa10.86□□□□□ -0.67
CLCN4-203ENST00000421085 SSC5DA1L4H1 1573 aa10.86□□□□□ -0.67
CLCN4-203ENST00000421085 SSX8Q7RTT4 187 aa10.86□□□□□ -0.67
CLCN4-203ENST00000421085 H1FOOQ8IZA3 346 aaPredicted RBP10.86□□□□□ -0.67
CLCN4-203ENST00000421085 OR1P1Q8NH06 330 aa10.86□□□□□ -0.67
CLCN4-203ENST00000421085 IP6K3Q96PC2 410 aa10.86□□□□□ -0.67
CLCN4-203ENST00000421085 COMPP49747 757 aaPredicted RBP10.86□□□□□ -0.67
CLCN4-203ENST00000421085 RUNX1Q01196 453 aa10.86□□□□□ -0.67
CLCN4-203ENST00000421085 PIGYQ3MUY2 71 aa10.86□□□□□ -0.67
CLCN4-203ENST00000421085 ANKRD37Q7Z713 158 aa10.86□□□□□ -0.67
CLCN4-203ENST00000421085 SERGEFQ9UGK8 458 aa10.86□□□□□ -0.67
CLCN4-203ENST00000421085 MRPS18BQ9Y676 258 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms