RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 SNTB1Q13884 538 aaKnown RBP17.69■□□□□ 0.42
GPC1-202ENST00000420138 GRK1Q15835 563 aa17.69■□□□□ 0.42
GPC1-202ENST00000420138 SLC22A25Q6T423 547 aa17.69■□□□□ 0.42
GPC1-202ENST00000420138 PEG10Q86TG7 708 aaKnown RBP17.69■□□□□ 0.42
GPC1-202ENST00000420138 RDH5Q92781 318 aa17.69■□□□□ 0.42
GPC1-202ENST00000420138 ELMOD3Q96FG2 381 aa17.69■□□□□ 0.42
GPC1-202ENST00000420138 GPR132Q9UNW8 380 aa17.69■□□□□ 0.42
GPC1-202ENST00000420138 DIDO1Q9BTC0 2240 aaKnown RBP17.69■□□□□ 0.42
GPC1-202ENST00000420138 OR5H14A6NHG9 310 aa17.68■□□□□ 0.42
GPC1-202ENST00000420138 ZBTB25P24278 435 aa17.68■□□□□ 0.42
GPC1-202ENST00000420138 ARPC4P59998 168 aa17.68■□□□□ 0.42
GPC1-202ENST00000420138 SRSF7Q16629 238 aaKnown RBP eCLIP17.68■□□□□ 0.42
GPC1-202ENST00000420138 SPIN3Q5JUX0 258 aa17.68■□□□□ 0.42
GPC1-202ENST00000420138 DCAF12L2Q5VW00 463 aa17.68■□□□□ 0.42
GPC1-202ENST00000420138 LYG2Q86SG7 212 aa17.68■□□□□ 0.42
GPC1-202ENST00000420138 CLEC4MQ9H2X3 399 aaPredicted RBP17.68■□□□□ 0.42
GPC1-202ENST00000420138 Q9N2K0 584 aa17.68■□□□□ 0.42
GPC1-202ENST00000420138 C1orf123Q9NWV4 160 aa17.68■□□□□ 0.42
GPC1-202ENST00000420138 ADGRG4Q8IZF6 3080 aa17.68■□□□□ 0.42
GPC1-202ENST00000420138 SLC33A1O00400 549 aaPredicted RBP17.68■□□□□ 0.42
GPC1-202ENST00000420138 HLA-AP01891 365 aaKnown RBP17.68■□□□□ 0.42
GPC1-202ENST00000420138 ZNF44P15621 663 aa17.68■□□□□ 0.42
GPC1-202ENST00000420138 NFYAP23511 347 aaPredicted RBP17.68■□□□□ 0.42
GPC1-202ENST00000420138 CD34P28906 385 aa17.68■□□□□ 0.42
GPC1-202ENST00000420138 MZT1Q08AG7 82 aa17.68■□□□□ 0.42
GPC1-202ENST00000420138 ADIPOQQ15848 244 aa17.68■□□□□ 0.42
GPC1-202ENST00000420138 C4orf17Q53FE4 359 aa17.68■□□□□ 0.42
GPC1-202ENST00000420138 C20orf204Q6ZNR8 217 aa17.68■□□□□ 0.42
GPC1-202ENST00000420138 DMRTC2Q8IXT2 367 aaPredicted RBP17.68■□□□□ 0.42
GPC1-202ENST00000420138 ADAD2Q8NCV1 583 aaKnown RBP17.68■□□□□ 0.42
GPC1-202ENST00000420138 MEGF10Q96KG7 1140 aa17.68■□□□□ 0.42
GPC1-202ENST00000420138 OR2V2Q96R30 315 aa17.68■□□□□ 0.42
GPC1-202ENST00000420138 C5orf66Q9H5L9 145 aa17.68■□□□□ 0.42
GPC1-202ENST00000420138 ZNF286AQ9HBT8 521 aa17.68■□□□□ 0.42
GPC1-202ENST00000420138 TMEM165Q9HC07 324 aa17.68■□□□□ 0.42
GPC1-202ENST00000420138 SPRY3O43610 288 aa17.67■□□□□ 0.42
GPC1-202ENST00000420138 OR5H8P0DN80 308 aa17.67■□□□□ 0.42
GPC1-202ENST00000420138 NCMAPQ5T1S8 102 aa17.67■□□□□ 0.42
GPC1-202ENST00000420138 ADAM5Q6NVV9 412 aa17.67■□□□□ 0.42
GPC1-202ENST00000420138 DHRS11Q6UWP2 260 aa17.67■□□□□ 0.42
GPC1-202ENST00000420138 ACP7Q6ZNF0 438 aa17.67■□□□□ 0.42
GPC1-202ENST00000420138 C5orf24Q7Z6I8 188 aa17.67■□□□□ 0.42
GPC1-202ENST00000420138 TMEM17Q86X19 198 aa17.67■□□□□ 0.42
GPC1-202ENST00000420138 ZNF680Q8NEM1 530 aa17.67■□□□□ 0.42
GPC1-202ENST00000420138 MRPL30Q8TCC3 161 aaKnown RBP17.67■□□□□ 0.42
GPC1-202ENST00000420138 LRRC46Q96FV0 321 aa17.67■□□□□ 0.42
GPC1-202ENST00000420138 DECR2Q9NUI1 292 aa17.67■□□□□ 0.42
GPC1-202ENST00000420138 TRBV6-6A0A0A6YYG2 114 aa17.66■□□□□ 0.42
GPC1-202ENST00000420138 HMSDA8MTL9 139 aa17.66■□□□□ 0.42
GPC1-202ENST00000420138 SIRPB1O00241 398 aa17.66■□□□□ 0.42
GPC1-202ENST00000420138 PRB1P04280 392 aa17.66■□□□□ 0.42
GPC1-202ENST00000420138 PPP1R1AQ13522 171 aa17.66■□□□□ 0.42
GPC1-202ENST00000420138 CHMP1AQ9HD42 196 aaPredicted RBP17.66■□□□□ 0.42
GPC1-202ENST00000420138 NECAP2Q9NVZ3 263 aa17.66■□□□□ 0.42
GPC1-202ENST00000420138 C9orf170A2RU37 121 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 SHISA9B4DS77 424 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 B8ZZF3 427 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.65■□□□□ 0.42
GPC1-202ENST00000420138 L7N2F9 121 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 ZNF205O95201 554 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 FPR2P25090 351 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 CFHR2P36980 270 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 CEBPDP49716 269 aaPredicted RBP17.65■□□□□ 0.42
GPC1-202ENST00000420138 TAS2R31P59538 309 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 SELENOVP59797 346 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 RBM39Q14498 530 aaKnown RBP17.65■□□□□ 0.42
GPC1-202ENST00000420138 LY6G6FQ5SQ64 297 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 LPCAT3Q6P1A2 487 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 ZNF880Q6PDB4 577 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 NEK7Q8TDX7 302 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 TMEM230Q96A57 120 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 ZNF2Q9BSG1 426 aaPredicted RBP17.65■□□□□ 0.42
GPC1-202ENST00000420138 RTBDNQ9BSG5 229 aaPredicted RBP17.65■□□□□ 0.42
GPC1-202ENST00000420138 NGBQ9NPG2 151 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 KCNJ16Q9NPI9 418 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 ATP23Q9Y6H3 246 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 HIVEP3Q5T1R4 2406 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 SH2D1BO14796 132 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 HAND1O96004 215 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 IGHV1-46P01743 117 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 OR4A8P0C604 315 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 EGR1P18146 543 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 CXCL2P19875 107 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 GLRA1P23415 457 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 LMO1P25800 156 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 SEC61A1P61619 476 aaKnown RBP17.65■□□□□ 0.42
GPC1-202ENST00000420138 IL13RA1P78552 427 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 OPCMLQ14982 345 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 SHEQ5VZ18 495 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 GAPTQ8N292 157 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 OR5M8Q8NGP6 311 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 LINC01560Q8TB33 94 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 PLPPR1Q8TBJ4 325 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 LRRC29Q8WV35 223 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 MITD1Q8WV92 249 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 SCGB3A2Q96PL1 93 aa17.65■□□□□ 0.42
GPC1-202ENST00000420138 RIMS4Q9H426 269 aaPredicted RBP17.65■□□□□ 0.42
GPC1-202ENST00000420138 hCG_1807616A0A1W2PRN6 198 aa17.64■□□□□ 0.41
GPC1-202ENST00000420138 M0R233 179 aa17.64■□□□□ 0.41
GPC1-202ENST00000420138 PSPNO60542 156 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms