RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 HAVCR2Q8TDQ0 301 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 RGP1Q92546 391 aaPredicted RBP5.66□□□□□ -1.5
HMGN1-205ENST00000419378 SLAMF9Q96A28 289 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 SPSB1Q96BD6 273 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 CEP19Q96LK0 163 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 OPALINQ96PE5 141 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 PDCD1LG2Q9BQ51 273 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 COMMD4Q9H0A8 199 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 C19orf12Q9NSK7 152 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 OR14J1Q9UGF5 321 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 DIMT1Q9UNQ2 313 aaKnown RBP5.66□□□□□ -1.5
HMGN1-205ENST00000419378 HSPE1-MOB4S4R3N1 261 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 TRBV2A0A0J9YWF9 115 aa5.65□□□□□ -1.5
HMGN1-205ENST00000419378 A0A0U1RQK1 487 aa5.65□□□□□ -1.5
HMGN1-205ENST00000419378 TMEM89A2RUT3 159 aa5.65□□□□□ -1.5
HMGN1-205ENST00000419378 H0YAE9 185 aa5.65□□□□□ -1.5
HMGN1-205ENST00000419378 RNASEK-C17orf49H0YIS7 233 aa5.65□□□□□ -1.5
HMGN1-205ENST00000419378 M0R1W7 72 aa5.65□□□□□ -1.5
HMGN1-205ENST00000419378 SPRY1O43609 319 aaPredicted RBP5.65□□□□□ -1.5
HMGN1-205ENST00000419378 CYB5AP00167 134 aa5.65□□□□□ -1.5
HMGN1-205ENST00000419378 MT-ND2P03891 347 aa5.65□□□□□ -1.5
HMGN1-205ENST00000419378 MELTFP08582 738 aa5.65□□□□□ -1.5
HMGN1-205ENST00000419378 RPSAP08865 295 aaKnown RBP5.65□□□□□ -1.5
HMGN1-205ENST00000419378 OCM2P0CE71 109 aa5.65□□□□□ -1.5
HMGN1-205ENST00000419378 OCMP0CE72 109 aaPredicted RBP5.65□□□□□ -1.5
HMGN1-205ENST00000419378 NPBWR2P48146 333 aa5.65□□□□□ -1.5
HMGN1-205ENST00000419378 POU3F4P49335 361 aa5.65□□□□□ -1.5
HMGN1-205ENST00000419378 COMPP49747 757 aaPredicted RBP5.65□□□□□ -1.5
HMGN1-205ENST00000419378 ATP1B3P54709 279 aa5.65□□□□□ -1.5
HMGN1-205ENST00000419378 DLX1P56177 255 aa5.65□□□□□ -1.5
HMGN1-205ENST00000419378 CFHR3Q02985 330 aa5.65□□□□□ -1.5
HMGN1-205ENST00000419378 PRB3Q04118 309 aaPredicted RBP5.65□□□□□ -1.5
HMGN1-205ENST00000419378 SLC34A1Q06495 639 aa5.65□□□□□ -1.5
HMGN1-205ENST00000419378 KLRD1Q13241 179 aa5.65□□□□□ -1.5
HMGN1-205ENST00000419378 CDK5R1Q15078 307 aa5.65□□□□□ -1.5
HMGN1-205ENST00000419378 DGAT2L7PQ6IED9 249 aa5.65□□□□□ -1.5
HMGN1-205ENST00000419378 METAP1DQ6UB28 335 aaPredicted RBP5.65□□□□□ -1.5
HMGN1-205ENST00000419378 C12orf54Q6X4T0 127 aa5.65□□□□□ -1.5
HMGN1-205ENST00000419378 RNF144BQ7Z419 303 aa5.65□□□□□ -1.5
HMGN1-205ENST00000419378 Q8IYB0 196 aa5.65□□□□□ -1.5
HMGN1-205ENST00000419378 C8orf59Q8N0T1 100 aaPredicted RBP5.65□□□□□ -1.5
HMGN1-205ENST00000419378 PARP16Q8N5Y8 322 aa5.65□□□□□ -1.5
HMGN1-205ENST00000419378 ASCC1Q8N9N2 400 aaKnown RBP5.65□□□□□ -1.5
HMGN1-205ENST00000419378 RPS4Y2Q8TD47 263 aa5.65□□□□□ -1.5
HMGN1-205ENST00000419378 TSEN15Q8WW01 171 aaKnown RBP5.65□□□□□ -1.5
HMGN1-205ENST00000419378 TNFRSF14Q92956 283 aa5.65□□□□□ -1.5
HMGN1-205ENST00000419378 EMG1Q92979 244 aaKnown RBP5.65□□□□□ -1.5
HMGN1-205ENST00000419378 SLC25A28Q96A46 364 aa5.65□□□□□ -1.5
HMGN1-205ENST00000419378 RFT1Q96AA3 541 aa5.65□□□□□ -1.5
HMGN1-205ENST00000419378 ELOVL1Q9BW60 279 aa5.65□□□□□ -1.5
HMGN1-205ENST00000419378 FAM234AQ9H0X4 552 aa5.65□□□□□ -1.5
HMGN1-205ENST00000419378 VCXQ9H320 206 aa5.65□□□□□ -1.5
HMGN1-205ENST00000419378 PRDM13Q9H4Q3 707 aa5.65□□□□□ -1.5
HMGN1-205ENST00000419378 DCLRE1BQ9H816 532 aa5.65□□□□□ -1.5
HMGN1-205ENST00000419378 METTL8Q9H825 291 aaKnown RBP5.65□□□□□ -1.5
HMGN1-205ENST00000419378 NOX4Q9NPH5 578 aa5.65□□□□□ -1.5
HMGN1-205ENST00000419378 RBFOX1Q9NWB1 397 aaKnown RBP5.65□□□□□ -1.5
HMGN1-205ENST00000419378 IL36RNQ9UBH0 155 aa5.65□□□□□ -1.5
HMGN1-205ENST00000419378 DHDHQ9UQ10 334 aa5.65□□□□□ -1.5
HMGN1-205ENST00000419378 CAB39Q9Y376 341 aaPredicted RBP5.65□□□□□ -1.5
HMGN1-205ENST00000419378 EXOSC1Q9Y3B2 195 aaKnown RBP5.65□□□□□ -1.5
HMGN1-205ENST00000419378 IGKV1-12A0A0C4DH73 117 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 A0A1W2PRD5 423 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 A0A1W2PRF3 423 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 A0A1W2PRM7 423 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 EFCAB10A6NFE3 127 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 ERICH4A6NGS2 130 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 FAM90A20PA6NIJ5 464 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 K7N7A8 449 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 NPFFO15130 113 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 SULT1B1O43704 296 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 ANGPTL7O43827 346 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 XPNPEP2O43895 674 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 ZNF737O75373 536 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 HAND1O96004 215 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 LALBAP00709 142 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 IGKV1D-12P01611 117 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 CALCBP10092 127 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 PIPP12273 146 aaPredicted RBP5.64□□□□□ -1.51
HMGN1-205ENST00000419378 BCL3P20749 454 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 SOX2P48431 317 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 RPL31P62899 125 aaKnown RBP5.64□□□□□ -1.51
HMGN1-205ENST00000419378 COL10A1Q03692 680 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 PDZK1IP1Q13113 114 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 MED21Q13503 144 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 ZNF273Q14593 569 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 CCDC58Q4VC31 144 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 NCR3LG1Q68D85 454 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 ASPHD2Q6ICH7 369 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 LAIR2Q6ISS4 152 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 RPL22L1Q6P5R6 122 aaKnown RBP5.64□□□□□ -1.51
HMGN1-205ENST00000419378 FIP1L1Q6UN15 594 aaKnown RBP5.64□□□□□ -1.51
HMGN1-205ENST00000419378 TMPRSS11AQ6ZMR5 421 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 C1orf122Q6ZSJ8 110 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 SERPINA12Q8IW75 414 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 MKXQ8IYA7 352 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 TMEM86BQ8N661 226 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 OR4M1Q8NGD0 313 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 OR5D18Q8NGL1 313 aa5.64□□□□□ -1.51
HMGN1-205ENST00000419378 OR5D14Q8NGL3 314 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms