RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 DIDO1Q9BTC0 2240 aaKnown RBP13.08□□□□□ -0.32
SEMA3B-203ENST00000419007 CBR3O75828 277 aa13.07□□□□□ -0.32
SEMA3B-203ENST00000419007 PDGFBP01127 241 aaPredicted RBP13.07□□□□□ -0.32
SEMA3B-203ENST00000419007 ZNF154Q13106 437 aa13.07□□□□□ -0.32
SEMA3B-203ENST00000419007 AKR1C8PQ5T2L2 129 aa13.07□□□□□ -0.32
SEMA3B-203ENST00000419007 ZNF818PQ6ZRF7 136 aa13.07□□□□□ -0.32
SEMA3B-203ENST00000419007 CPNE4Q96A23 557 aaPredicted RBP13.07□□□□□ -0.32
SEMA3B-203ENST00000419007 OR2H1Q9GZK4 316 aa13.07□□□□□ -0.32
SEMA3B-203ENST00000419007 GLRX2Q9NS18 164 aa13.07□□□□□ -0.32
SEMA3B-203ENST00000419007 hCG_38984A0A1B0GV85 526 aa13.07□□□□□ -0.32
SEMA3B-203ENST00000419007 CDS2O95674 445 aa13.07□□□□□ -0.32
SEMA3B-203ENST00000419007 UMODP07911 640 aa13.07□□□□□ -0.32
SEMA3B-203ENST00000419007 EPHA8P29322 1005 aaPredicted RBP13.07□□□□□ -0.32
SEMA3B-203ENST00000419007 RAC3P60763 192 aa13.07□□□□□ -0.32
SEMA3B-203ENST00000419007 CYB561D1Q8N8Q1 229 aa13.07□□□□□ -0.32
SEMA3B-203ENST00000419007 SPIN2AQ99865 258 aa13.07□□□□□ -0.32
SEMA3B-203ENST00000419007 SPIN2BQ9BPZ2 258 aa13.07□□□□□ -0.32
SEMA3B-203ENST00000419007 SLC25A31Q9H0C2 315 aa13.07□□□□□ -0.32
SEMA3B-203ENST00000419007 WNT5BQ9H1J7 359 aa13.07□□□□□ -0.32
SEMA3B-203ENST00000419007 HS3ST3B1Q9Y662 390 aa13.07□□□□□ -0.32
SEMA3B-203ENST00000419007 ZNF816-ZNF321PA0A0X1KG74 233 aa13.07□□□□□ -0.32
SEMA3B-203ENST00000419007 PROB1E7EW31 1015 aa13.07□□□□□ -0.32
SEMA3B-203ENST00000419007 S100PP25815 95 aa13.07□□□□□ -0.32
SEMA3B-203ENST00000419007 UCP3P55916 312 aa13.07□□□□□ -0.32
SEMA3B-203ENST00000419007 RAB2AP61019 212 aa13.07□□□□□ -0.32
SEMA3B-203ENST00000419007 TMEM211Q6ICI0 200 aa13.07□□□□□ -0.32
SEMA3B-203ENST00000419007 ZNF100Q8IYN0 542 aa13.07□□□□□ -0.32
SEMA3B-203ENST00000419007 KDF1Q8NAX2 398 aaPredicted RBP13.07□□□□□ -0.32
SEMA3B-203ENST00000419007 DUSP23Q9BVJ7 150 aa13.07□□□□□ -0.32
SEMA3B-203ENST00000419007 OR51M1Q9H341 326 aa13.07□□□□□ -0.32
SEMA3B-203ENST00000419007 IL36RNQ9UBH0 155 aa13.07□□□□□ -0.32
SEMA3B-203ENST00000419007 GJE1A6NN92 205 aa13.06□□□□□ -0.32
SEMA3B-203ENST00000419007 TERTO14746 1132 aaKnown RBP13.06□□□□□ -0.32
SEMA3B-203ENST00000419007 COX6A1P12074 109 aa13.06□□□□□ -0.32
SEMA3B-203ENST00000419007 CCL4P13236 92 aa13.06□□□□□ -0.32
SEMA3B-203ENST00000419007 BCL3P20749 454 aa13.06□□□□□ -0.32
SEMA3B-203ENST00000419007 HAAOP46952 286 aa13.06□□□□□ -0.32
SEMA3B-203ENST00000419007 ZNF429Q86V71 674 aa13.06□□□□□ -0.32
SEMA3B-203ENST00000419007 RNASE11Q8TAA1 199 aaKnown RBP13.06□□□□□ -0.32
SEMA3B-203ENST00000419007 FAM86C1Q9NVL1 165 aa13.06□□□□□ -0.32
SEMA3B-203ENST00000419007 OR6C6A6NF89 314 aa13.06□□□□□ -0.32
SEMA3B-203ENST00000419007 C9J4A7 227 aa13.06□□□□□ -0.32
SEMA3B-203ENST00000419007 CHST1O43916 411 aa13.06□□□□□ -0.32
SEMA3B-203ENST00000419007 SRPXP78539 464 aa13.06□□□□□ -0.32
SEMA3B-203ENST00000419007 DLK1P80370 383 aa13.06□□□□□ -0.32
SEMA3B-203ENST00000419007 PDZD11Q5EBL8 140 aa13.06□□□□□ -0.32
SEMA3B-203ENST00000419007 WIPI1Q5MNZ9 446 aaPredicted RBP13.06□□□□□ -0.32
SEMA3B-203ENST00000419007 SLC23A3Q6PIS1 610 aa13.06□□□□□ -0.32
SEMA3B-203ENST00000419007 ABHD3Q8WU67 409 aa13.06□□□□□ -0.32
SEMA3B-203ENST00000419007 HS3ST6Q96QI5 342 aa13.06□□□□□ -0.32
SEMA3B-203ENST00000419007 BCL2L14Q9BZR8 327 aa13.06□□□□□ -0.32
SEMA3B-203ENST00000419007 CCL28Q9NRJ3 127 aa13.06□□□□□ -0.32
SEMA3B-203ENST00000419007 A0A096LPE4 126 aa13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 IGKV1D-13A0A0B4J2D9 117 aa13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 LY6G6EA0A0G2JKS1 128 aa13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 A0A1W2PPZ6 126 aa13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 PITX3O75364 302 aa13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 IGKV1-13P0DP09 117 aa13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 GPM6AP51674 278 aa13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 SPSB3Q6PJ21 355 aa13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 HEPN1Q6WQI6 88 aa13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 ASCL4Q6XD76 172 aa13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 SELENOHQ8IZQ5 122 aaKnown RBP13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 IL22RA1Q8N6P7 574 aa13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 CPT1CQ8TCG5 803 aa13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 IMMP1LQ96LU5 166 aa13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 TOLLIPQ9H0E2 274 aa13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 TMPRSS5Q9H3S3 457 aa13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 WSB1Q9Y6I7 421 aa13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 U3KQA8 63 aa13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 TMEM50AO95807 157 aa13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 P04436 131 aa13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 RFPL3SP0C7P2 107 aa13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 EDN3P14138 238 aa13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 PMELP40967 661 aa13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 RPL23AP62750 156 aaKnown RBP13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 EXT1Q16394 746 aa13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 TMEM42Q69YG0 159 aa13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 WDR5BQ86VZ2 330 aa13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 CMTM1Q8IZ96 169 aa13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 SPEM1Q8N4L4 309 aa13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 OR56B2PQ8NGI1 322 aa13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 UNKLQ9H9P5 680 aaKnown RBP13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 LYRM2Q9NU23 88 aaPredicted RBP13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 CXCL12P48061 93 aa13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 IZUMO4Q1ZYL8 232 aa13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 OR51H1Q8NH63 302 aa13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 OR10D3Q8NH80 312 aa13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 GPR179Q6PRD1 2367 aa13.05□□□□□ -0.32
SEMA3B-203ENST00000419007 C3orf80F5H4A9 247 aa13.04□□□□□ -0.32
SEMA3B-203ENST00000419007 HIKESHIQ53FT3 197 aa13.04□□□□□ -0.32
SEMA3B-203ENST00000419007 ALKBH2Q6NS38 261 aa13.04□□□□□ -0.32
SEMA3B-203ENST00000419007 MUCL1Q96DR8 90 aa13.04□□□□□ -0.32
SEMA3B-203ENST00000419007 ZNF845Q96IR2 970 aaPredicted RBP13.04□□□□□ -0.32
SEMA3B-203ENST00000419007 NIPSNAP3BQ9BS92 247 aa13.04□□□□□ -0.32
SEMA3B-203ENST00000419007 SF3B5Q9BWJ5 86 aaKnown RBP13.04□□□□□ -0.32
SEMA3B-203ENST00000419007 HLA-HP01893 362 aa13.04□□□□□ -0.32
SEMA3B-203ENST00000419007 THNSL2Q86YJ6 484 aa13.04□□□□□ -0.32
SEMA3B-203ENST00000419007 GGACTQ9BVM4 153 aa13.04□□□□□ -0.32
SEMA3B-203ENST00000419007 GNG13Q9P2W3 67 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms