RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 FRG2CA6NGY1 282 aa6.95□□□□□ -1.3
HMGXB4-202ENST00000418170 CEBPZOSA8MTT3 80 aa6.95□□□□□ -1.3
HMGXB4-202ENST00000418170 C17orf105B2RV13 164 aa6.95□□□□□ -1.3
HMGXB4-202ENST00000418170 OPRM1P35372 400 aa6.95□□□□□ -1.3
HMGXB4-202ENST00000418170 POU3F1Q03052 451 aaPredicted RBP6.95□□□□□ -1.3
HMGXB4-202ENST00000418170 ZNF154Q13106 437 aa6.95□□□□□ -1.3
HMGXB4-202ENST00000418170 C2orf27AQ580R0 203 aa6.95□□□□□ -1.3
HMGXB4-202ENST00000418170 CXorf66Q5JRM2 361 aaPredicted RBP6.95□□□□□ -1.3
HMGXB4-202ENST00000418170 NUFIP2Q7Z417 695 aaKnown RBP6.95□□□□□ -1.3
HMGXB4-202ENST00000418170 GRINAQ7Z429 371 aa6.95□□□□□ -1.3
HMGXB4-202ENST00000418170 MOB3AQ96BX8 217 aa6.95□□□□□ -1.3
HMGXB4-202ENST00000418170 Q96M66 194 aa6.95□□□□□ -1.3
HMGXB4-202ENST00000418170 MAP1LC3B2A6NCE7 125 aa6.95□□□□□ -1.3
HMGXB4-202ENST00000418170 SHISA7A6NL88 538 aa6.95□□□□□ -1.3
HMGXB4-202ENST00000418170 ALG1L2C9J202 215 aa6.95□□□□□ -1.3
HMGXB4-202ENST00000418170 VIPR2P41587 438 aa6.95□□□□□ -1.3
HMGXB4-202ENST00000418170 ZNF41P51814 821 aaPredicted RBP6.95□□□□□ -1.3
HMGXB4-202ENST00000418170 RPL23P62829 140 aaKnown RBP6.95□□□□□ -1.3
HMGXB4-202ENST00000418170 ZNF726P1Q15940 193 aa6.95□□□□□ -1.3
HMGXB4-202ENST00000418170 LCN15Q6UWW0 184 aa6.95□□□□□ -1.3
HMGXB4-202ENST00000418170 TEX43Q6ZNM6 134 aa6.95□□□□□ -1.3
HMGXB4-202ENST00000418170 FAM57BQ71RH2 274 aa6.95□□□□□ -1.3
HMGXB4-202ENST00000418170 OR2T10Q8NGZ9 312 aa6.95□□□□□ -1.3
HMGXB4-202ENST00000418170 SDSLQ96GA7 329 aa6.95□□□□□ -1.3
HMGXB4-202ENST00000418170 MAP1LC3BQ9GZQ8 125 aa6.95□□□□□ -1.3
HMGXB4-202ENST00000418170 TMEM222Q9H0R3 208 aa6.95□□□□□ -1.3
HMGXB4-202ENST00000418170 ELL3Q9HB65 397 aaPredicted RBP6.95□□□□□ -1.3
HMGXB4-202ENST00000418170 PTRH2Q9Y3E5 179 aaKnown RBP6.95□□□□□ -1.3
HMGXB4-202ENST00000418170 C3orf85A0A1B0GTC6 90 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 A0A1W2PQD3 144 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 YPEL1O60688 119 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 KBTBD11O94819 623 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 ADH1BP00325 375 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 BPIFB3P59826 476 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 PPP1CAP62136 330 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 EXT1Q16394 746 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 PRTGQ2VWP7 1150 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 ACSF3Q4G176 576 aaPredicted RBP6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 AARDQ4LEZ3 155 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 RNASE8Q8TDE3 154 aaKnown RBP6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 YPEL2Q96QA6 119 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 AURKAIP1Q9NWT8 199 aaPredicted RBP6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 HRASLS2Q9NWW9 162 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 KLHL13Q9P2N7 655 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 SEMA4FO95754 770 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 WASP42768 502 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 OR1D4P47884 311 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 RANP62826 216 aaKnown RBP6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 RBKSQ9H477 322 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 MSL2Q9HCI7 577 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 FREM2Q5SZK8 3169 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 TCRBV21S2A2A0A5A6 115 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 CLEC18AA5D8T8 446 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 H0YIG0 161 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 MPPED1O15442 326 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 IFNA1P01562 189 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 FCGR2AP12318 317 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 RAB7AP51149 207 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 FGF8P55075 233 aaPredicted RBP6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 SOX8P57073 446 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 ID3Q02535 119 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 ENDOGQ14249 297 aaKnown RBP6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 CLEC12BQ2HXU8 276 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 C9orf50Q5SZB4 431 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 H1FNTQ75WM6 255 aaPredicted RBP6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 C11orf42Q8N5U0 333 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 CLEC18CQ8NCF0 446 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 AGBL5Q8NDL9 886 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 TMEM56Q96MV1 263 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 SIGLEC12Q96PQ1 595 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 REPIN1Q9BWE0 567 aaKnown RBP6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 OR51I2Q9H344 312 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 POLR1DQ9Y2S0 133 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 TMEM56-RWDD3S4R434 201 aa6.94□□□□□ -1.3
HMGXB4-202ENST00000418170 SLC31A1O15431 190 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 DDAH2O95865 285 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 IL12BP29460 328 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 SRP14P37108 136 aaKnown RBP6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 NPBWR2P48146 333 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 MRPS34P82930 218 aaKnown RBP6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 BATFQ16520 125 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 PSRC1Q6PGN9 363 aaPredicted RBP6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 SSX7Q7RTT5 188 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 TMEM256Q8N2U0 113 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 ADIPOR1Q96A54 375 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 ANAPC16Q96DE5 110 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 LIN37Q96GY3 246 aaPredicted RBP6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 RASL10BQ96S79 203 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 SERINC1Q9NRX5 453 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 RNF150Q9ULK6 438 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 LRRC3CA6NJW4 275 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 IFNA5P01569 189 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 TFPI2P48307 235 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 UBE2NP61088 152 aaKnown RBP6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 RTP5Q14D33 572 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 TMEM183BQ1AE95 376 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 TDRG1Q3Y452 100 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 TOMM20LQ6UXN7 152 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 OR14C36Q8NHC7 312 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 TSACCQ96A04 125 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms