RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 SCTP09683 121 aa16.24■□□□□ 0.19
RAB3IP-205ENST00000417413 ZNF728P0DKX0 622 aa16.24■□□□□ 0.19
RAB3IP-205ENST00000417413 CD200P41217 278 aa16.24■□□□□ 0.19
RAB3IP-205ENST00000417413 CA7P43166 264 aa16.24■□□□□ 0.19
RAB3IP-205ENST00000417413 GLP1RP43220 463 aa16.24■□□□□ 0.19
RAB3IP-205ENST00000417413 UCP3P55916 312 aa16.24■□□□□ 0.19
RAB3IP-205ENST00000417413 GMFBP60983 142 aa16.24■□□□□ 0.19
RAB3IP-205ENST00000417413 ANKRD55Q3KP44 614 aa16.24■□□□□ 0.19
RAB3IP-205ENST00000417413 TREM2Q9NZC2 230 aa16.24■□□□□ 0.19
RAB3IP-205ENST00000417413 TRAV14DV4A0A0A6YYC5 116 aa16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 ZSCAN5BA6NJL1 495 aa16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 WNT9BO14905 357 aa16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 PTBP3O95758 552 aaKnown RBP16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 KNG1P01042 644 aa16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 THBDP07204 575 aa16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 AADACP22760 399 aa16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 MDH2P40926 338 aaKnown RBP16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 KLF3P57682 345 aaPredicted RBP16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 MZT1Q08AG7 82 aa16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 HERPUD1Q15011 391 aa16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 PAN3Q58A45 887 aaKnown RBP16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 PCSK4Q6UW60 755 aa16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 PLPPR1Q8TBJ4 325 aa16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 CNTNAP3BQ96NU0 1288 aa16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 CNTNAP3Q9BZ76 1288 aa16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 TMEM165Q9HC07 324 aa16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 MEMO1Q9Y316 297 aa16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 DSPP15924 2871 aaKnown RBP16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 KIR2DS1A0A191URI9 304 aa16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 CRYM-AS1A6NIL9 109 aa16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 A6NLC8 198 aa16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 HMSDA8MTL9 139 aa16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 CXCL2P19875 107 aa16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 NFYAP23511 347 aaPredicted RBP16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 KIR2DS4P43632 304 aa16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 RPS23P62266 143 aaKnown RBP16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 KIR2DS1Q14954 304 aa16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 ACP7Q6ZNF0 438 aa16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 GAPTQ8N292 157 aa16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 OR2Z1Q8NG97 314 aa16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 TOMM40LQ969M1 308 aa16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 SYT3Q9BQG1 590 aa16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 HEXA-AS1Q9H8Q6 139 aa16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 UFSP2Q9NUQ7 469 aa16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 PRR13Q9NZ81 148 aa16.23■□□□□ 0.19
RAB3IP-205ENST00000417413 SHANK1Q9Y566 2161 aa16.22■□□□□ 0.19
RAB3IP-205ENST00000417413 PKD1L2Q7Z442 2459 aa16.22■□□□□ 0.19
RAB3IP-205ENST00000417413 IGKV1-6A0A0C4DH72 117 aa16.22■□□□□ 0.19
RAB3IP-205ENST00000417413 POM121CA8CG34 1229 aa16.22■□□□□ 0.19
RAB3IP-205ENST00000417413 HAND1O96004 215 aa16.22■□□□□ 0.19
RAB3IP-205ENST00000417413 LMO1P25800 156 aa16.22■□□□□ 0.19
RAB3IP-205ENST00000417413 FXYD4P59646 89 aa16.22■□□□□ 0.19
RAB3IP-205ENST00000417413 SORDQ00796 357 aa16.22■□□□□ 0.19
RAB3IP-205ENST00000417413 VHLLQ6RSH7 139 aa16.22■□□□□ 0.19
RAB3IP-205ENST00000417413 FIP1L1Q6UN15 594 aaKnown RBP16.22■□□□□ 0.19
RAB3IP-205ENST00000417413 ZNF497Q6ZNH5 498 aa16.22■□□□□ 0.19
RAB3IP-205ENST00000417413 COQ8AQ8NI60 647 aa16.22■□□□□ 0.19
RAB3IP-205ENST00000417413 PIK3IP1Q96FE7 263 aa16.22■□□□□ 0.19
RAB3IP-205ENST00000417413 SEC22AQ96IW7 307 aa16.22■□□□□ 0.19
RAB3IP-205ENST00000417413 CADP27708 2225 aa16.21■□□□□ 0.19
RAB3IP-205ENST00000417413 RFPL4AA6NLU0 287 aa16.21■□□□□ 0.19
RAB3IP-205ENST00000417413 RFPL4AL1F8VTS6 287 aa16.21■□□□□ 0.19
RAB3IP-205ENST00000417413 ATXN7O15265 892 aaPredicted RBP16.21■□□□□ 0.19
RAB3IP-205ENST00000417413 ATP6V1G1O75348 118 aa16.21■□□□□ 0.19
RAB3IP-205ENST00000417413 PPYP01298 95 aa16.21■□□□□ 0.19
RAB3IP-205ENST00000417413 RCC1P18754 421 aaPredicted RBP16.21■□□□□ 0.19
RAB3IP-205ENST00000417413 SSTR2P30874 369 aa16.21■□□□□ 0.19
RAB3IP-205ENST00000417413 SERPINF1P36955 418 aa16.21■□□□□ 0.19
RAB3IP-205ENST00000417413 ZNF81P51508 661 aa16.21■□□□□ 0.19
RAB3IP-205ENST00000417413 SEC61A1P61619 476 aaKnown RBP16.21■□□□□ 0.19
RAB3IP-205ENST00000417413 HOXA4Q00056 320 aaPredicted RBP16.21■□□□□ 0.19
RAB3IP-205ENST00000417413 TMEM108Q6UXF1 575 aa16.21■□□□□ 0.19
RAB3IP-205ENST00000417413 WFDC8Q8IUA0 241 aa16.21■□□□□ 0.19
RAB3IP-205ENST00000417413 NUP37Q8NFH4 326 aa16.21■□□□□ 0.19
RAB3IP-205ENST00000417413 RSRP1Q9BUV0 290 aa16.21■□□□□ 0.19
RAB3IP-205ENST00000417413 MRPL37Q9BZE1 423 aaKnown RBP16.21■□□□□ 0.19
RAB3IP-205ENST00000417413 RAB18Q9NP72 206 aa16.21■□□□□ 0.19
RAB3IP-205ENST00000417413 C1orf123Q9NWV4 160 aa16.21■□□□□ 0.19
RAB3IP-205ENST00000417413 DPRXA6NFQ7 191 aa16.2■□□□□ 0.18
RAB3IP-205ENST00000417413 TUSC2O75896 110 aa16.2■□□□□ 0.18
RAB3IP-205ENST00000417413 SNAPC5O75971 98 aa16.2■□□□□ 0.18
RAB3IP-205ENST00000417413 IFNA2P01563 188 aa16.2■□□□□ 0.18
RAB3IP-205ENST00000417413 CTXN2P0C2S0 81 aa16.2■□□□□ 0.18
RAB3IP-205ENST00000417413 PTAFRP25105 342 aa16.2■□□□□ 0.18
RAB3IP-205ENST00000417413 CEBPDP49716 269 aaPredicted RBP16.2■□□□□ 0.18
RAB3IP-205ENST00000417413 PIGPP57054 158 aa16.2■□□□□ 0.18
RAB3IP-205ENST00000417413 SSX8Q7RTT4 187 aa16.2■□□□□ 0.18
RAB3IP-205ENST00000417413 SGPP2Q8IWX5 399 aa16.2■□□□□ 0.18
RAB3IP-205ENST00000417413 SLC38A6Q8IZM9 456 aa16.2■□□□□ 0.18
RAB3IP-205ENST00000417413 PRR7Q8TB68 274 aa16.2■□□□□ 0.18
RAB3IP-205ENST00000417413 ELMOD3Q96FG2 381 aa16.2■□□□□ 0.18
RAB3IP-205ENST00000417413 PDCD10Q9BUL8 212 aa16.2■□□□□ 0.18
RAB3IP-205ENST00000417413 H7C1Q1 480 aa16.19■□□□□ 0.18
RAB3IP-205ENST00000417413 TSC22D2O75157 780 aa16.19■□□□□ 0.18
RAB3IP-205ENST00000417413 TK1P04183 234 aa16.19■□□□□ 0.18
RAB3IP-205ENST00000417413 HERV-K104P61576 105 aa16.19■□□□□ 0.18
RAB3IP-205ENST00000417413 HLA-DRB3P79483 266 aa16.19■□□□□ 0.18
RAB3IP-205ENST00000417413 SPRNQ5BIV9 151 aa16.19■□□□□ 0.18
RAB3IP-205ENST00000417413 OR4A4PQ8NGN8 299 aa16.19■□□□□ 0.18
RAB3IP-205ENST00000417413 LRRC29Q8WV35 223 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms