RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 ACTBL2Q562R1 376 aa14.25□□□□□ -0.13
CALD1-204ENST00000417172 ATPAF1Q5TC12 328 aaPredicted RBP14.25□□□□□ -0.13
CALD1-204ENST00000417172 FIP1L1Q6UN15 594 aaKnown RBP14.25□□□□□ -0.13
CALD1-204ENST00000417172 TMED4Q7Z7H5 227 aa14.25□□□□□ -0.13
CALD1-204ENST00000417172 CCDC107Q8WV48 283 aa14.25□□□□□ -0.13
CALD1-204ENST00000417172 A0A1W2PPR1 153 aa14.25□□□□□ -0.13
CALD1-204ENST00000417172 C7orf66A4D0T2 115 aa14.25□□□□□ -0.13
CALD1-204ENST00000417172 KNG1P01042 644 aa14.25□□□□□ -0.13
CALD1-204ENST00000417172 RCC1P18754 421 aaPredicted RBP14.25□□□□□ -0.13
CALD1-204ENST00000417172 CFHR2P36980 270 aa14.25□□□□□ -0.13
CALD1-204ENST00000417172 NPY4RP50391 375 aa14.25□□□□□ -0.13
CALD1-204ENST00000417172 BAMBIQ13145 260 aa14.25□□□□□ -0.13
CALD1-204ENST00000417172 CDK10Q15131 360 aa14.25□□□□□ -0.13
CALD1-204ENST00000417172 IGSF11Q5DX21 431 aa14.25□□□□□ -0.13
CALD1-204ENST00000417172 OR10Z1Q8NGY1 313 aa14.25□□□□□ -0.13
CALD1-204ENST00000417172 MARCH1Q8TCQ1 289 aa14.25□□□□□ -0.13
CALD1-204ENST00000417172 CHAC2Q8WUX2 184 aa14.25□□□□□ -0.13
CALD1-204ENST00000417172 ZNF286AQ9HBT8 521 aa14.25□□□□□ -0.13
CALD1-204ENST00000417172 Q9N2K0 584 aa14.25□□□□□ -0.13
CALD1-204ENST00000417172 DNAJB11Q9UBS4 358 aa14.25□□□□□ -0.13
CALD1-204ENST00000417172 EDARQ9UNE0 448 aa14.25□□□□□ -0.13
CALD1-204ENST00000417172 PPP1R3CQ9UQK1 317 aa14.25□□□□□ -0.13
CALD1-204ENST00000417172 WIPI2Q9Y4P8 454 aa14.25□□□□□ -0.13
CALD1-204ENST00000417172 UTP20O75691 2785 aaKnown RBP14.25□□□□□ -0.13
CALD1-204ENST00000417172 TMEM82A0PJX8 343 aa14.24□□□□□ -0.13
CALD1-204ENST00000417172 VSTM5A8MXK1 200 aa14.24□□□□□ -0.13
CALD1-204ENST00000417172 ADH4P08319 380 aa14.24□□□□□ -0.13
CALD1-204ENST00000417172 SCTP09683 121 aa14.24□□□□□ -0.13
CALD1-204ENST00000417172 EFNB3Q15768 340 aa14.24□□□□□ -0.13
CALD1-204ENST00000417172 AADACL3Q5VUY0 350 aa14.24□□□□□ -0.13
CALD1-204ENST00000417172 MUC15Q8N387 334 aa14.24□□□□□ -0.13
CALD1-204ENST00000417172 DHRS9Q9BPW9 319 aa14.24□□□□□ -0.13
CALD1-204ENST00000417172 ZNF221Q9UK13 617 aa14.24□□□□□ -0.13
CALD1-204ENST00000417172 SPTAN1Q13813 2472 aaKnown RBP14.24□□□□□ -0.13
CALD1-204ENST00000417172 MEX3AA1L020 520 aaKnown RBP14.23□□□□□ -0.13
CALD1-204ENST00000417172 CD55P08174 381 aa14.23□□□□□ -0.13
CALD1-204ENST00000417172 RAG2P55895 527 aa14.23□□□□□ -0.13
CALD1-204ENST00000417172 RBM39Q14498 530 aaKnown RBP14.23□□□□□ -0.13
CALD1-204ENST00000417172 SWI5Q1ZZU3 235 aa14.23□□□□□ -0.13
CALD1-204ENST00000417172 SLC36A1Q7Z2H8 476 aa14.23□□□□□ -0.13
CALD1-204ENST00000417172 AKAP14Q86UN6 197 aa14.23□□□□□ -0.13
CALD1-204ENST00000417172 ARRDC1Q8N5I2 433 aa14.23□□□□□ -0.13
CALD1-204ENST00000417172 UBALD1Q8TB05 177 aa14.23□□□□□ -0.13
CALD1-204ENST00000417172 SAP30LQ9HAJ7 183 aa14.23□□□□□ -0.13
CALD1-204ENST00000417172 RNF7Q9UBF6 113 aa14.23□□□□□ -0.13
CALD1-204ENST00000417172 KMT2BQ9UMN6 2715 aaPredicted RBP14.23□□□□□ -0.13
CALD1-204ENST00000417172 A0A1B0GW55 424 aa14.23□□□□□ -0.13
CALD1-204ENST00000417172 OR5H14A6NHG9 310 aa14.23□□□□□ -0.13
CALD1-204ENST00000417172 B9A039 149 aa14.23□□□□□ -0.13
CALD1-204ENST00000417172 DUX4L2P0CJ85 424 aa14.23□□□□□ -0.13
CALD1-204ENST00000417172 DUX4L3P0CJ86 424 aa14.23□□□□□ -0.13
CALD1-204ENST00000417172 DUX4L4P0CJ87 422 aa14.23□□□□□ -0.13
CALD1-204ENST00000417172 DUX4L5P0CJ88 424 aa14.23□□□□□ -0.13
CALD1-204ENST00000417172 DUX4L6P0CJ89 424 aa14.23□□□□□ -0.13
CALD1-204ENST00000417172 DUX4L7P0CJ90 424 aa14.23□□□□□ -0.13
CALD1-204ENST00000417172 OR5H8P0DN80 308 aa14.23□□□□□ -0.13
CALD1-204ENST00000417172 SELLP14151 372 aa14.23□□□□□ -0.13
CALD1-204ENST00000417172 PI3P19957 117 aa14.23□□□□□ -0.13
CALD1-204ENST00000417172 PRDX2P32119 198 aa14.23□□□□□ -0.13
CALD1-204ENST00000417172 GABRA2P47869 451 aa14.23□□□□□ -0.13
CALD1-204ENST00000417172 OR3A1P47881 315 aa14.23□□□□□ -0.13
CALD1-204ENST00000417172 DUX4L9Q6RFH8 374 aaPredicted RBP14.23□□□□□ -0.13
CALD1-204ENST00000417172 ZNF497Q6ZNH5 498 aa14.23□□□□□ -0.13
CALD1-204ENST00000417172 ZNF554Q86TJ5 538 aa14.23□□□□□ -0.13
CALD1-204ENST00000417172 LHFPL1Q86WI0 220 aa14.23□□□□□ -0.13
CALD1-204ENST00000417172 TPRX1Q8N7U7 411 aa14.23□□□□□ -0.13
CALD1-204ENST00000417172 ASCC1Q8N9N2 400 aaKnown RBP14.23□□□□□ -0.13
CALD1-204ENST00000417172 DEFB108BQ8NET1 73 aa14.23□□□□□ -0.13
CALD1-204ENST00000417172 TERB2Q8NHR7 220 aa14.23□□□□□ -0.13
CALD1-204ENST00000417172 SLC25A21Q9BQT8 299 aaPredicted RBP14.23□□□□□ -0.13
CALD1-204ENST00000417172 ZNF2Q9BSG1 426 aaPredicted RBP14.23□□□□□ -0.13
CALD1-204ENST00000417172 OR51J1Q9H342 316 aa14.23□□□□□ -0.13
CALD1-204ENST00000417172 DECR2Q9NUI1 292 aa14.23□□□□□ -0.13
CALD1-204ENST00000417172 DUX4Q9UBX2 424 aa14.23□□□□□ -0.13
CALD1-204ENST00000417172 DOPEY1Q5JWR5 2465 aa14.22□□□□□ -0.13
CALD1-204ENST00000417172 HMX3A6NHT5 357 aa14.22□□□□□ -0.13
CALD1-204ENST00000417172 LMO1P25800 156 aa14.22□□□□□ -0.13
CALD1-204ENST00000417172 MECP2P51608 486 aaKnown RBP14.22□□□□□ -0.13
CALD1-204ENST00000417172 UBE2MP61081 183 aaKnown RBP14.22□□□□□ -0.13
CALD1-204ENST00000417172 AESQ08117 197 aa14.22□□□□□ -0.13
CALD1-204ENST00000417172 HERPUD1Q15011 391 aa14.22□□□□□ -0.13
CALD1-204ENST00000417172 ZNF660Q6AZW8 331 aaPredicted RBP14.22□□□□□ -0.13
CALD1-204ENST00000417172 GLDNQ6ZMI3 551 aaPredicted RBP14.22□□□□□ -0.13
CALD1-204ENST00000417172 ADAD2Q8NCV1 583 aaKnown RBP14.22□□□□□ -0.13
CALD1-204ENST00000417172 DIRC2Q96SL1 478 aa14.22□□□□□ -0.13
CALD1-204ENST00000417172 NECAP2Q9NVZ3 263 aa14.22□□□□□ -0.13
CALD1-204ENST00000417172 RASL12Q9NYN1 266 aa14.22□□□□□ -0.13
CALD1-204ENST00000417172 GLS2Q9UI32 602 aa14.22□□□□□ -0.13
CALD1-204ENST00000417172 NPTNQ9Y639 398 aa14.22□□□□□ -0.13
CALD1-204ENST00000417172 IGKV1-6A0A0C4DH72 117 aa14.21□□□□□ -0.13
CALD1-204ENST00000417172 CCNKO75909 580 aa14.21□□□□□ -0.13
CALD1-204ENST00000417172 GLAP06280 429 aa14.21□□□□□ -0.13
CALD1-204ENST00000417172 HNRNPCP07910 306 aaKnown RBP eCLIP14.21□□□□□ -0.13
CALD1-204ENST00000417172 RRAS2P62070 204 aaPredicted RBP14.21□□□□□ -0.13
CALD1-204ENST00000417172 ZMYND11Q15326 602 aa14.21□□□□□ -0.13
CALD1-204ENST00000417172 FCN2Q15485 313 aa14.21□□□□□ -0.13
CALD1-204ENST00000417172 TESK1Q15569 626 aa14.21□□□□□ -0.13
CALD1-204ENST00000417172 FAM90A1Q86YD7 464 aa14.21□□□□□ -0.13
CALD1-204ENST00000417172 Q8TCH9 128 aa14.21□□□□□ -0.13
CALD1-204ENST00000417172 COQ2Q96H96 371 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms