RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 CA7P43166 264 aa9.02□□□□□ -0.96
SMPD4P1-201ENST00000416717 SEC61A1P61619 476 aaKnown RBP9.02□□□□□ -0.96
SMPD4P1-201ENST00000416717 IL13RA2Q14627 380 aa9.02□□□□□ -0.96
SMPD4P1-201ENST00000416717 ADAM5Q6NVV9 412 aa9.02□□□□□ -0.96
SMPD4P1-201ENST00000416717 TMEM108Q6UXF1 575 aa9.02□□□□□ -0.96
SMPD4P1-201ENST00000416717 Q8IYB0 196 aa9.02□□□□□ -0.96
SMPD4P1-201ENST00000416717 UBALD1Q8TB05 177 aa9.02□□□□□ -0.96
SMPD4P1-201ENST00000416717 HYLS1Q96M11 299 aa9.02□□□□□ -0.96
SMPD4P1-201ENST00000416717 PRORYQ9H606 182 aa9.02□□□□□ -0.96
SMPD4P1-201ENST00000416717 RANBP3Q9H6Z4 567 aaPredicted RBP9.02□□□□□ -0.96
SMPD4P1-201ENST00000416717 SPACA1Q9HBV2 294 aa9.02□□□□□ -0.96
SMPD4P1-201ENST00000416717 Q9N2K0 584 aa9.02□□□□□ -0.96
SMPD4P1-201ENST00000416717 MYOZ1Q9NP98 299 aaPredicted RBP9.02□□□□□ -0.96
SMPD4P1-201ENST00000416717 TREM2Q9NZC2 230 aa9.02□□□□□ -0.96
SMPD4P1-201ENST00000416717 NKX2-6A6NCS4 301 aa9.02□□□□□ -0.97
SMPD4P1-201ENST00000416717 G3V3Q6 166 aa9.02□□□□□ -0.97
SMPD4P1-201ENST00000416717 SLC33A1O00400 549 aaPredicted RBP9.02□□□□□ -0.97
SMPD4P1-201ENST00000416717 TSC22D2O75157 780 aa9.02□□□□□ -0.97
SMPD4P1-201ENST00000416717 IGHV3-13P01766 116 aa9.02□□□□□ -0.97
SMPD4P1-201ENST00000416717 ZNF660Q6AZW8 331 aaPredicted RBP9.02□□□□□ -0.97
SMPD4P1-201ENST00000416717 LAMTOR1Q6IAA8 161 aa9.02□□□□□ -0.97
SMPD4P1-201ENST00000416717 PEG10Q86TG7 708 aaKnown RBP9.02□□□□□ -0.97
SMPD4P1-201ENST00000416717 LINC00596Q86U02 117 aa9.02□□□□□ -0.97
SMPD4P1-201ENST00000416717 C1orf174Q8IYL3 243 aa9.02□□□□□ -0.97
SMPD4P1-201ENST00000416717 PRR18Q8N4B5 295 aa9.02□□□□□ -0.97
SMPD4P1-201ENST00000416717 POC1AQ8NBT0 407 aa9.02□□□□□ -0.97
SMPD4P1-201ENST00000416717 ST6GALNAC3Q8NDV1 305 aa9.02□□□□□ -0.97
SMPD4P1-201ENST00000416717 LRRC29Q8WV35 223 aa9.02□□□□□ -0.97
SMPD4P1-201ENST00000416717 SEC22AQ96IW7 307 aa9.02□□□□□ -0.97
SMPD4P1-201ENST00000416717 OR2V2Q96R30 315 aa9.02□□□□□ -0.97
SMPD4P1-201ENST00000416717 C14orf166Q9Y224 244 aaKnown RBP9.02□□□□□ -0.97
SMPD4P1-201ENST00000416717 ATP23Q9Y6H3 246 aa9.02□□□□□ -0.97
SMPD4P1-201ENST00000416717 DYSFO75923 2080 aa9.02□□□□□ -0.97
SMPD4P1-201ENST00000416717 MEX3AA1L020 520 aaKnown RBP9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 PRSS44E7EML9 344 aa9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 SH2D1BO14796 132 aa9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 HAND1O96004 215 aa9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 GIPP09681 153 aaPredicted RBP9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 GRNP28799 593 aaKnown RBP9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 TAS2R31P59538 309 aa9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 CTAG1AP78358 180 aa9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 C3orf36Q3SXR2 165 aa9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 TMEM128Q5BJH2 165 aa9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 ANGPTL6Q8NI99 470 aa9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 PLPPR1Q8TBJ4 325 aa9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 MRPL30Q8TCC3 161 aaKnown RBP9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 ZFAND1Q8TCF1 268 aa9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 POM121Q96HA1 1249 aa9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 SCGB3A2Q96PL1 93 aa9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 PHB2Q99623 299 aa9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 SPTBN1Q01082 2364 aaKnown RBP9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 DSCAMO60469 2012 aa9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 PTBP3O95758 552 aaKnown RBP9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 AADACP22760 399 aa9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 SSTR2P30874 369 aa9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 PMELP40967 661 aa9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 GLP1RP43220 463 aa9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 SUPT4H1P63272 117 aaKnown RBP9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 RBM39Q14498 530 aaKnown RBP9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 PHLDA2Q53GA4 152 aa9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 LY6G6FQ5SQ64 297 aa9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 CLEC18BQ6UXF7 455 aa9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 ACP7Q6ZNF0 438 aa9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 MOGAT3Q86VF5 341 aa9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 C9orf62Q8N4C0 152 aa9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 ARL6IP6Q8N6S5 226 aa9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 MITD1Q8WV92 249 aa9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 PDCD10Q9BUL8 212 aa9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 OPN4Q9UHM6 478 aa9.01□□□□□ -0.97
SMPD4P1-201ENST00000416717 HIVEP3Q5T1R4 2406 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 C13orf42A0A1B0GVH6 325 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 RFPL4AA6NLU0 287 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 CEACAM18A8MTB9 384 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 RFPL4AL1F8VTS6 287 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 PSPNO60542 156 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 OR2A4O95047 310 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 ZNF728P0DKX0 622 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 EGR1P18146 543 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 PTAFRP25105 342 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 ZNF81P51508 661 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 SELENOVP59797 346 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 RAP2BP61225 183 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 RPS23P62266 143 aaKnown RBP9□□□□□ -0.97
SMPD4P1-201ENST00000416717 HERPUD1Q15011 391 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 ZNF146Q15072 292 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 CDSNQ15517 529 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 LRRC37A5PQ49AS3 106 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 DHRS11Q6UWP2 260 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 ZCCHC24Q8N2G6 241 aaKnown RBP9□□□□□ -0.97
SMPD4P1-201ENST00000416717 TMEM185AQ8NFB2 350 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 ITLN1Q8WWA0 313 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 IL1F10Q8WWZ1 152 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 OR2A7Q96R45 310 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 FXYD6Q9H0Q3 95 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 METRNQ9UJH8 293 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 ACACBO00763 2458 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 ABCA4P78363 2273 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 IGLV3-9A0A075B6K5 115 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 IGHV3OR15-7A0A075B7D8 119 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 TEX13DA0A0J9YY54 714 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms