RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 PMP2P02689 132 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 IL3P08700 152 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 SCTP09683 121 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 OR5AL1P0C617 328 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 RFPL3SP0C7P2 107 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 GKN3PP0CG01 181 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 ACP2P11117 423 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 CD99P14209 185 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 ZNF14P17017 642 aaPredicted RBP3.03□□□□□ -1.92
SF3B1-203ENST00000414174 ZNF19P17023 458 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 CD58P19256 250 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 IMPA1P29218 277 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 AGTR1P30556 359 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 RPL3P39023 403 aaKnown RBP3.03□□□□□ -1.92
SF3B1-203ENST00000414174 REG1BP48304 166 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 CLDN17P56750 224 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 FBXW4P57775 412 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 GNG5P63218 68 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 HSD52Q0P140 79 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 TIMM50Q3ZCQ8 353 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 SPATA31B1PQ5VZV4 182 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 TMEM64Q6YI46 380 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 Q6YL49 198 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 Q71RC1 249 aaPredicted RBP3.03□□□□□ -1.92
SF3B1-203ENST00000414174 PRSS41Q7RTY9 318 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 SLC47A2Q86VL8 602 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 OOSP2Q86WS3 158 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 MMD2Q8IY49 270 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 ZNF433Q8N7K0 673 aaPredicted RBP3.03□□□□□ -1.92
SF3B1-203ENST00000414174 ZNF615Q8N8J6 731 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 PRELID2Q8N945 189 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 KLHDC9Q8NEP7 349 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 ACVR1CQ8NER5 493 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 OR7A2PQ8NGA2 310 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 OR10AD1Q8NGE0 317 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 OR10D4PQ8NGN7 298 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 OR4C3Q8NH37 302 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 THAP6Q8TBB0 222 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 CNIH3Q8TBE1 160 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 FBXO25Q8TCJ0 367 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 ZPLD1Q8TCW7 415 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 GPR148Q8TDV2 347 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 RNF128Q8TEB7 428 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 PP6455Q8WZ26 134 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 NDRG1Q92597 394 aaKnown RBP3.03□□□□□ -1.92
SF3B1-203ENST00000414174 DYRK2Q92630 601 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 SARAFQ96BY9 339 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 BBC3Q96PG8 261 aaPredicted RBP3.03□□□□□ -1.92
SF3B1-203ENST00000414174 SCGB3A2Q96PL1 93 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 MCHR1Q99705 422 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 FOXC2Q99958 501 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 KCTD14Q9BQ13 255 aaPredicted RBP3.03□□□□□ -1.92
SF3B1-203ENST00000414174 MIEN1Q9BRT3 115 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 TMEM121Q9BTD3 319 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 OR51I2Q9H344 312 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 GLIPR2Q9H4G4 154 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 ZNF442Q9H7R0 627 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 SMCO4Q9NRQ5 59 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 NTNG1Q9Y2I2 539 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 MYH7P12883 1935 aa3.03□□□□□ -1.92
SF3B1-203ENST00000414174 ANKRD50Q9ULJ7 1429 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 A0A1B0GV50 99 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 TCRBV9S1A1TA0A576 114 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 GAGE12BA1L429 117 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 OR2M5A3KFT3 312 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 BTNL10A8MVZ5 291 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 C9JAW5 83 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.02□□□□□ -1.93
SF3B1-203ENST00000414174 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.02□□□□□ -1.93
SF3B1-203ENST00000414174 J3QR89 54 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 PRYO14603 147 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 MRPS12O15235 138 aaKnown RBP3.02□□□□□ -1.93
SF3B1-203ENST00000414174 MPPED1O15442 326 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 OR2T1O43869 369 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 EEDO75530 441 aaKnown RBP3.02□□□□□ -1.93
SF3B1-203ENST00000414174 NDUFB4O95168 129 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 MAS1P04201 325 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 HLA-DQB2P05538 268 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 HLA-DOAP06340 250 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 ELANEP08246 267 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 NMBP08949 121 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 MRPL3P09001 348 aaKnown RBP3.02□□□□□ -1.93
SF3B1-203ENST00000414174 FAM106CPP0CH98 169 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 GZMBP10144 247 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 CREB1P16220 341 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 CNTFRP26992 372 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 TNFSF8P32971 234 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 RPL29P47914 159 aaKnown RBP3.02□□□□□ -1.93
SF3B1-203ENST00000414174 TFPI2P48307 235 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 RARRES1P49788 294 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 LHX2P50458 406 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 CYP2J2P51589 502 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 POLR2HP52434 150 aaKnown RBP3.02□□□□□ -1.93
SF3B1-203ENST00000414174 NDUFA6P56556 154 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 S100A10P60903 97 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 PPP1CBP62140 327 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 DEFA5Q01523 94 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 MEF2BQ02080 365 aaPredicted RBP3.02□□□□□ -1.93
SF3B1-203ENST00000414174 SP4Q02446 784 aa3.02□□□□□ -1.93
SF3B1-203ENST00000414174 MEF2CQ06413 473 aaPredicted RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms