RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 C5orf49A4QMS7 147 aa12.85□□□□□ -0.35
TTC39A-208ENST00000413473 A6NLC8 198 aa12.85□□□□□ -0.35
TTC39A-208ENST00000413473 ADAM20O43506 726 aa12.85□□□□□ -0.35
TTC39A-208ENST00000413473 SSSCA1O60232 199 aa12.85□□□□□ -0.35
TTC39A-208ENST00000413473 EIF3GO75821 320 aaKnown RBP eCLIP12.85□□□□□ -0.35
TTC39A-208ENST00000413473 NAPSAO96009 420 aa12.85□□□□□ -0.35
TTC39A-208ENST00000413473 PDGFBP01127 241 aaPredicted RBP12.85□□□□□ -0.35
TTC39A-208ENST00000413473 IGKV1-13P0DP09 117 aa12.85□□□□□ -0.35
TTC39A-208ENST00000413473 ATP6V0CP27449 155 aa12.85□□□□□ -0.35
TTC39A-208ENST00000413473 FOXG1P55316 489 aaPredicted RBP12.85□□□□□ -0.35
TTC39A-208ENST00000413473 HERPUD1Q15011 391 aa12.85□□□□□ -0.35
TTC39A-208ENST00000413473 TSC22D1Q15714 1073 aa12.85□□□□□ -0.35
TTC39A-208ENST00000413473 DCAF12Q5T6F0 453 aa12.85□□□□□ -0.35
TTC39A-208ENST00000413473 Q6ZS49 121 aa12.85□□□□□ -0.35
TTC39A-208ENST00000413473 TIPARPQ7Z3E1 657 aaKnown RBP12.85□□□□□ -0.35
TTC39A-208ENST00000413473 OR2G3Q8NGZ4 309 aa12.85□□□□□ -0.35
TTC39A-208ENST00000413473 TMEM45BQ96B21 275 aa12.85□□□□□ -0.35
TTC39A-208ENST00000413473 POM121Q96HA1 1249 aa12.85□□□□□ -0.35
TTC39A-208ENST00000413473 RARRES2Q99969 163 aa12.85□□□□□ -0.35
TTC39A-208ENST00000413473 PRRG4Q9BZD6 226 aa12.85□□□□□ -0.35
TTC39A-208ENST00000413473 MTCH1Q9NZJ7 389 aa12.85□□□□□ -0.35
TTC39A-208ENST00000413473 A0A1W2PPH5 198 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 FAM90A10PA6NDY2 464 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 FAM90A18PA6NE21 464 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 FAM90A16PA6NEW6 464 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 FAM90A20PA6NIJ5 464 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 FAM90A8PA6NJQ4 464 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 SLC22A20A6NK97 555 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 FAM90A7PA6NKC0 464 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 ZNF724A8MTY0 619 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 FAM90A22PA8MWA6 464 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 FAM90A12PA8MX19 464 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 FAM90A5PA8MXJ8 464 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 FAM90A23PA8MXZ1 464 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 PROB1E7EW31 1015 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 GPR37O15354 613 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 FAM90A15PP0C7V4 464 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 FAM90A13PP0C7W8 464 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 FAM90A14PP0C7W9 464 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 FAM90A24PP0C7X0 464 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 FGF12P61328 243 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 RNF212Q495C1 297 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 TMEM252Q8N6L7 170 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 KDF1Q8NAX2 398 aaPredicted RBP12.84□□□□□ -0.35
TTC39A-208ENST00000413473 NEK7Q8TDX7 302 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 TMEM171Q8WVE6 324 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 PSMF1Q92530 271 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 TUBA4BQ9H853 241 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 COL6A3P12111 3177 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 ZNF732B4DXR9 585 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 HSD17B6O14756 317 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 ARG1P05089 322 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 SERPINA7P05543 415 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 CCL20P78556 96 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 ZNF266Q14584 549 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 LILRB1Q8NHL6 650 aaPredicted RBP12.84□□□□□ -0.35
TTC39A-208ENST00000413473 CT55Q8WUE5 264 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 SPIN2AQ99865 258 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 SPIN2BQ9BPZ2 258 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 PLEKHF2Q9H8W4 249 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 CCL28Q9NRJ3 127 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 LRFN1Q9P244 771 aa12.84□□□□□ -0.35
TTC39A-208ENST00000413473 TNRC18O15417 2968 aaPredicted RBP12.84□□□□□ -0.35
TTC39A-208ENST00000413473 CDRT15L2A8MXV6 281 aa12.83□□□□□ -0.35
TTC39A-208ENST00000413473 SLC33A1O00400 549 aaPredicted RBP12.83□□□□□ -0.35
TTC39A-208ENST00000413473 CST7O76096 145 aa12.83□□□□□ -0.35
TTC39A-208ENST00000413473 CER1O95813 267 aa12.83□□□□□ -0.35
TTC39A-208ENST00000413473 SSPNQ14714 243 aa12.83□□□□□ -0.35
TTC39A-208ENST00000413473 EIF2S3LQ2VIR3 472 aaKnown RBP12.83□□□□□ -0.35
TTC39A-208ENST00000413473 CEACAM21Q3KPI0 293 aa12.83□□□□□ -0.35
TTC39A-208ENST00000413473 NRN1LQ496H8 165 aa12.83□□□□□ -0.35
TTC39A-208ENST00000413473 MRPL21Q7Z2W9 205 aaKnown RBP12.83□□□□□ -0.35
TTC39A-208ENST00000413473 TUSC5Q8IXB3 177 aa12.83□□□□□ -0.35
TTC39A-208ENST00000413473 ZNF561Q8N587 486 aa12.83□□□□□ -0.35
TTC39A-208ENST00000413473 ZFP62Q8NB50 900 aaPredicted RBP12.83□□□□□ -0.35
TTC39A-208ENST00000413473 OR5C1Q8NGR4 320 aa12.83□□□□□ -0.35
TTC39A-208ENST00000413473 CALHM2Q9HA72 323 aa12.83□□□□□ -0.35
TTC39A-208ENST00000413473 ZNF503-AS2A6NEH8 195 aa12.83□□□□□ -0.36
TTC39A-208ENST00000413473 B4E171 279 aa12.83□□□□□ -0.36
TTC39A-208ENST00000413473 S100A6P06703 90 aa12.83□□□□□ -0.36
TTC39A-208ENST00000413473 CELA3AP09093 270 aa12.83□□□□□ -0.36
TTC39A-208ENST00000413473 ACAA1P09110 424 aaPredicted RBP12.83□□□□□ -0.36
TTC39A-208ENST00000413473 CBR1P16152 277 aa12.83□□□□□ -0.36
TTC39A-208ENST00000413473 ITGA3P26006 1051 aa12.83□□□□□ -0.36
TTC39A-208ENST00000413473 TSPAN7P41732 249 aa12.83□□□□□ -0.36
TTC39A-208ENST00000413473 SULT1A1P50225 295 aa12.83□□□□□ -0.36
TTC39A-208ENST00000413473 RND3P61587 244 aa12.83□□□□□ -0.36
TTC39A-208ENST00000413473 VAMP2P63027 116 aa12.83□□□□□ -0.36
TTC39A-208ENST00000413473 ZDHHC23Q8IYP9 409 aa12.83□□□□□ -0.36
TTC39A-208ENST00000413473 FAM24BQ8N5W8 94 aa12.83□□□□□ -0.36
TTC39A-208ENST00000413473 LFNGQ8NES3 379 aa12.83□□□□□ -0.36
TTC39A-208ENST00000413473 OR1J1Q8NGS3 322 aa12.83□□□□□ -0.36
TTC39A-208ENST00000413473 PRDM6Q9NQX0 595 aa12.83□□□□□ -0.36
TTC39A-208ENST00000413473 LYRM2Q9NU23 88 aaPredicted RBP12.83□□□□□ -0.36
TTC39A-208ENST00000413473 IGKV3D-15A0A087WSY6 115 aa12.82□□□□□ -0.36
TTC39A-208ENST00000413473 IGKV1-6A0A0C4DH72 117 aa12.82□□□□□ -0.36
TTC39A-208ENST00000413473 hCG_1809904A0A1W2PP81 198 aa12.82□□□□□ -0.36
TTC39A-208ENST00000413473 A0A1W2PR64 198 aa12.82□□□□□ -0.36
TTC39A-208ENST00000413473 A0A1W2PRV1 198 aa12.82□□□□□ -0.36
TTC39A-208ENST00000413473 C5orf52A6NGY3 159 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms