RNA–Protein interactions for RNA: ENST00000407142.5

PPM1F-203, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PPM1F, Length 5,587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-203ENST00000407142 ANKRD34CP0C6C1 535 aa13.48□□□□□ -0.25
PPM1F-203ENST00000407142 CXCL3P19876 107 aa13.48□□□□□ -0.25
PPM1F-203ENST00000407142 POLR2GP62487 172 aaKnown RBP eCLIP13.48□□□□□ -0.25
PPM1F-203ENST00000407142 HIST3H3Q16695 136 aa13.48□□□□□ -0.25
PPM1F-203ENST00000407142 SPINK9Q5DT21 86 aa13.48□□□□□ -0.25
PPM1F-203ENST00000407142 MYO7AQ13402 2215 aa13.47□□□□□ -0.25
PPM1F-203ENST00000407142 DPPA3Q6W0C5 159 aa13.47□□□□□ -0.25
PPM1F-203ENST00000407142 SPRED2Q7Z698 418 aa13.47□□□□□ -0.25
PPM1F-203ENST00000407142 PECRQ9BY49 303 aa13.47□□□□□ -0.25
PPM1F-203ENST00000407142 OR2D2Q9H210 308 aa13.47□□□□□ -0.25
PPM1F-203ENST00000407142 F5H697 171 aa13.47□□□□□ -0.25
PPM1F-203ENST00000407142 TUSC5Q8IXB3 177 aa13.47□□□□□ -0.25
PPM1F-203ENST00000407142 OR5AU1Q8NGC0 362 aa13.47□□□□□ -0.25
PPM1F-203ENST00000407142 TMEM171Q8WVE6 324 aa13.47□□□□□ -0.25
PPM1F-203ENST00000407142 IGF2P01344 180 aa13.47□□□□□ -0.25
PPM1F-203ENST00000407142 RPS4Y1P22090 263 aaKnown RBP13.47□□□□□ -0.25
PPM1F-203ENST00000407142 CD81P60033 236 aa13.47□□□□□ -0.25
PPM1F-203ENST00000407142 SKP2Q13309 424 aa13.47□□□□□ -0.25
PPM1F-203ENST00000407142 OR1L6Q8NGR2 347 aa13.47□□□□□ -0.25
PPM1F-203ENST00000407142 MEGF10Q96KG7 1140 aa13.47□□□□□ -0.25
PPM1F-203ENST00000407142 MAP1LC3CQ9BXW4 147 aa13.47□□□□□ -0.25
PPM1F-203ENST00000407142 SCN4AP35499 1836 aa13.47□□□□□ -0.25
PPM1F-203ENST00000407142 C16orf97H3BN30 126 aa13.47□□□□□ -0.25
PPM1F-203ENST00000407142 SURF2Q15527 256 aaPredicted RBP13.47□□□□□ -0.25
PPM1F-203ENST00000407142 CLEC18BQ6UXF7 455 aa13.47□□□□□ -0.25
PPM1F-203ENST00000407142 LYG1Q8N1E2 194 aa13.47□□□□□ -0.25
PPM1F-203ENST00000407142 OR11H7Q8NGC8 314 aa13.47□□□□□ -0.25
PPM1F-203ENST00000407142 TTC3P53804 2025 aa13.46□□□□□ -0.25
PPM1F-203ENST00000407142 OR2T8A6NH00 312 aa13.46□□□□□ -0.25
PPM1F-203ENST00000407142 PRSS1P07477 247 aa13.46□□□□□ -0.25
PPM1F-203ENST00000407142 COX6B1P14854 86 aa13.46□□□□□ -0.25
PPM1F-203ENST00000407142 COX7A1P24310 79 aa13.46□□□□□ -0.25
PPM1F-203ENST00000407142 CDKN2AP42771 156 aaKnown RBP13.46□□□□□ -0.25
PPM1F-203ENST00000407142 KRTCAP3Q53RY4 240 aa13.46□□□□□ -0.25
PPM1F-203ENST00000407142 C1orf185Q5T7R7 199 aa13.46□□□□□ -0.25
PPM1F-203ENST00000407142 DMKNQ6E0U4 476 aaPredicted RBP13.46□□□□□ -0.25
PPM1F-203ENST00000407142 TMEM116Q8NCL8 245 aa13.46□□□□□ -0.25
PPM1F-203ENST00000407142 ASB10Q8WXI3 467 aa13.46□□□□□ -0.25
PPM1F-203ENST00000407142 PTP4A1Q93096 173 aa13.46□□□□□ -0.25
PPM1F-203ENST00000407142 NUDT16L1Q9BRJ7 211 aaKnown RBP13.46□□□□□ -0.25
PPM1F-203ENST00000407142 SRD5A3Q9H8P0 318 aa13.46□□□□□ -0.25
PPM1F-203ENST00000407142 TMEM167BQ9NRX6 74 aa13.46□□□□□ -0.25
PPM1F-203ENST00000407142 WASHC3Q9Y3C0 194 aa13.46□□□□□ -0.25
PPM1F-203ENST00000407142 C10orf35Q96D05 121 aa13.46□□□□□ -0.25
PPM1F-203ENST00000407142 GMPPAQ96IJ6 420 aaPredicted RBP13.46□□□□□ -0.25
PPM1F-203ENST00000407142 VSTM2LQ96N03 204 aa13.46□□□□□ -0.25
PPM1F-203ENST00000407142 NPAS1Q99742 590 aa13.46□□□□□ -0.25
PPM1F-203ENST00000407142 A6NDN8 102 aa13.46□□□□□ -0.25
PPM1F-203ENST00000407142 C11orf94C9JXX5 98 aa13.46□□□□□ -0.25
PPM1F-203ENST00000407142 DNPH1O43598 174 aa13.46□□□□□ -0.25
PPM1F-203ENST00000407142 CSN3P07498 182 aa13.46□□□□□ -0.25
PPM1F-203ENST00000407142 BRS3P32247 399 aa13.46□□□□□ -0.25
PPM1F-203ENST00000407142 ACAA2P42765 397 aaKnown RBP13.46□□□□□ -0.25
PPM1F-203ENST00000407142 LGALSLQ3ZCW2 172 aaPredicted RBP13.46□□□□□ -0.25
PPM1F-203ENST00000407142 EIF4E3Q8N5X7 224 aaKnown RBP13.46□□□□□ -0.25
PPM1F-203ENST00000407142 RNF2Q99496 336 aa13.46□□□□□ -0.25
PPM1F-203ENST00000407142 OR6C3Q9NZP0 311 aa13.46□□□□□ -0.25
PPM1F-203ENST00000407142 MYO5AQ9Y4I1 1855 aaKnown RBP13.46□□□□□ -0.25
PPM1F-203ENST00000407142 C3AR1Q16581 482 aa13.46□□□□□ -0.26
PPM1F-203ENST00000407142 TUSC1Q2TAM9 212 aa13.46□□□□□ -0.26
PPM1F-203ENST00000407142 LHFPL5Q8TAF8 219 aa13.46□□□□□ -0.26
PPM1F-203ENST00000407142 DOK5Q9P104 306 aa13.46□□□□□ -0.26
PPM1F-203ENST00000407142 LIPT2A6NK58 231 aa13.45□□□□□ -0.26
PPM1F-203ENST00000407142 CCL3P10147 92 aa13.45□□□□□ -0.26
PPM1F-203ENST00000407142 LSM11P83369 360 aaKnown RBP eCLIP13.45□□□□□ -0.266e-6■□□□□ 9.1
PPM1F-203ENST00000407142 ABLIM2Q6H8Q1 611 aa13.45□□□□□ -0.26
PPM1F-203ENST00000407142 ZNF770Q6IQ21 691 aaPredicted RBP13.45□□□□□ -0.26
PPM1F-203ENST00000407142 TMEM251Q8N6I4 163 aa13.45□□□□□ -0.26
PPM1F-203ENST00000407142 STARD4Q96DR4 205 aa13.45□□□□□ -0.26
PPM1F-203ENST00000407142 SMIM12Q96EX1 92 aa13.45□□□□□ -0.26
PPM1F-203ENST00000407142 ELOVL1Q9BW60 279 aa13.45□□□□□ -0.26
PPM1F-203ENST00000407142 FUT9Q9Y231 359 aa13.45□□□□□ -0.26
PPM1F-203ENST00000407142 DEDDO75618 318 aa13.45□□□□□ -0.26
PPM1F-203ENST00000407142 FDX2Q6P4F2 183 aa13.45□□□□□ -0.26
PPM1F-203ENST00000407142 TMEM65Q6PI78 240 aa13.45□□□□□ -0.26
PPM1F-203ENST00000407142 CBLN3Q6UW01 205 aa13.45□□□□□ -0.26
PPM1F-203ENST00000407142 KCNK15Q9H427 330 aa13.45□□□□□ -0.26
PPM1F-203ENST00000407142 VAX2Q9UIW0 290 aa13.45□□□□□ -0.26
PPM1F-203ENST00000407142 GEMIN2O14893 280 aaKnown RBP13.45□□□□□ -0.26
PPM1F-203ENST00000407142 UBE2L3P68036 154 aaKnown RBP13.45□□□□□ -0.26
PPM1F-203ENST00000407142 RAB24Q969Q5 203 aa13.45□□□□□ -0.26
PPM1F-203ENST00000407142 LRRC3BQ96PB8 259 aa13.45□□□□□ -0.26
PPM1F-203ENST00000407142 MS4A7Q9GZW8 240 aaPredicted RBP13.45□□□□□ -0.26
PPM1F-203ENST00000407142 MS4A5Q9H3V2 200 aa13.45□□□□□ -0.26
PPM1F-203ENST00000407142 OPN4Q9UHM6 478 aa13.45□□□□□ -0.26
PPM1F-203ENST00000407142 A0A1W2PN81 502 aa13.45□□□□□ -0.26
PPM1F-203ENST00000407142 TCL1AP56279 114 aa13.45□□□□□ -0.26
PPM1F-203ENST00000407142 RAB33BQ9H082 229 aa13.45□□□□□ -0.26
PPM1F-203ENST00000407142 MIXL1Q9H2W2 232 aa13.45□□□□□ -0.26
PPM1F-203ENST00000407142 PRR13Q9NZ81 148 aa13.45□□□□□ -0.26
PPM1F-203ENST00000407142 MFNGO00587 321 aa13.45□□□□□ -0.26
PPM1F-203ENST00000407142 EML2O95834 649 aa13.45□□□□□ -0.26
PPM1F-203ENST00000407142 THSD4Q6ZMP0 1018 aa13.45□□□□□ -0.26
PPM1F-203ENST00000407142 TBC1D26Q86UD7 250 aa13.45□□□□□ -0.26
PPM1F-203ENST00000407142 RFESDQ8TAC1 157 aa13.45□□□□□ -0.26
PPM1F-203ENST00000407142 RPS4Y2Q8TD47 263 aa13.45□□□□□ -0.26
PPM1F-203ENST00000407142 IL17BQ9UHF5 180 aa13.45□□□□□ -0.26
PPM1F-203ENST00000407142 ZFP36L2P47974 494 aaKnown RBP13.44□□□□□ -0.26
PPM1F-203ENST00000407142 ASCL5Q7RTU5 278 aa13.44□□□□□ -0.26
PPM1F-203ENST00000407142 OR2M3Q8NG83 312 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms