RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 LYPD2Q6UXB3 125 aa17.06■□□□□ 0.32
CHKB-201ENST00000406938 TMEM185AQ8NFB2 350 aa17.06■□□□□ 0.32
CHKB-201ENST00000406938 MTFP1Q9UDX5 166 aa17.06■□□□□ 0.32
CHKB-201ENST00000406938 A0A1W2PQ09 198 aa17.05■□□□□ 0.32
CHKB-201ENST00000406938 K7N7A8 449 aa17.05■□□□□ 0.32
CHKB-201ENST00000406938 ADAM20O43506 726 aa17.05■□□□□ 0.32
CHKB-201ENST00000406938 NDUFA2O43678 99 aa17.05■□□□□ 0.32
CHKB-201ENST00000406938 ORC5O43913 435 aa17.05■□□□□ 0.32
CHKB-201ENST00000406938 TK1P04183 234 aa17.05■□□□□ 0.32
CHKB-201ENST00000406938 CSN2P05814 226 aa17.05■□□□□ 0.32
CHKB-201ENST00000406938 FCER2P06734 321 aa17.05■□□□□ 0.32
CHKB-201ENST00000406938 IFITM3Q01628 133 aa17.05■□□□□ 0.32
CHKB-201ENST00000406938 SLC36A1Q7Z2H8 476 aa17.05■□□□□ 0.32
CHKB-201ENST00000406938 GVQW1Q8N7I0 195 aa17.05■□□□□ 0.32
CHKB-201ENST00000406938 CHMP1AQ9HD42 196 aaPredicted RBP17.05■□□□□ 0.32
CHKB-201ENST00000406938 IFT46Q9NQC8 304 aa17.05■□□□□ 0.32
CHKB-201ENST00000406938 CTSZQ9UBR2 303 aa17.05■□□□□ 0.32
CHKB-201ENST00000406938 NBPF19A0A087WUL8 3843 aa17.05■□□□□ 0.32
CHKB-201ENST00000406938 ABCA12Q86UK0 2595 aa17.04■□□□□ 0.32
CHKB-201ENST00000406938 CEACAM18A8MTB9 384 aa17.04■□□□□ 0.32
CHKB-201ENST00000406938 RBBP9O75884 186 aa17.04■□□□□ 0.32
CHKB-201ENST00000406938 NAPSAO96009 420 aa17.04■□□□□ 0.32
CHKB-201ENST00000406938 FCGR3AP08637 254 aa17.04■□□□□ 0.32
CHKB-201ENST00000406938 KCNJ3P48549 501 aa17.04■□□□□ 0.32
CHKB-201ENST00000406938 PDLIM4P50479 330 aa17.04■□□□□ 0.32
CHKB-201ENST00000406938 ACTBP60709 375 aa17.04■□□□□ 0.32
CHKB-201ENST00000406938 ACTG1P63261 375 aa17.04■□□□□ 0.32
CHKB-201ENST00000406938 DCTN2Q13561 401 aaKnown RBP17.04■□□□□ 0.32
CHKB-201ENST00000406938 TMEM155Q4W5P6 130 aa17.04■□□□□ 0.32
CHKB-201ENST00000406938 RSBN1Q5VWQ0 802 aaPredicted RBP17.04■□□□□ 0.32
CHKB-201ENST00000406938 ZNF497Q6ZNH5 498 aa17.04■□□□□ 0.32
CHKB-201ENST00000406938 Q6ZPA2 131 aa17.04■□□□□ 0.32
CHKB-201ENST00000406938 PPP1R35Q8TAP8 253 aa17.04■□□□□ 0.32
CHKB-201ENST00000406938 COQ2Q96H96 371 aa17.04■□□□□ 0.32
CHKB-201ENST00000406938 MED30Q96HR3 178 aa17.04■□□□□ 0.32
CHKB-201ENST00000406938 OCSTAMPQ9BR26 566 aa17.04■□□□□ 0.32
CHKB-201ENST00000406938 KAAG1Q9UBP8 84 aa17.04■□□□□ 0.32
CHKB-201ENST00000406938 ZNF230Q9UIE0 474 aaPredicted RBP17.04■□□□□ 0.32
CHKB-201ENST00000406938 EDARQ9UNE0 448 aa17.04■□□□□ 0.32
CHKB-201ENST00000406938 CSMD2Q7Z408 3487 aa17.04■□□□□ 0.32
CHKB-201ENST00000406938 MGST3O14880 152 aa17.03■□□□□ 0.32
CHKB-201ENST00000406938 DTYMKP23919 212 aa17.03■□□□□ 0.32
CHKB-201ENST00000406938 DNASE1P24855 282 aa17.03■□□□□ 0.32
CHKB-201ENST00000406938 GIFP27352 417 aa17.03■□□□□ 0.32
CHKB-201ENST00000406938 CBX5P45973 191 aa17.03■□□□□ 0.32
CHKB-201ENST00000406938 AESQ08117 197 aa17.03■□□□□ 0.32
CHKB-201ENST00000406938 EDDM3AQ14507 147 aa17.03■□□□□ 0.32
CHKB-201ENST00000406938 STEAP3Q658P3 488 aa17.03■□□□□ 0.32
CHKB-201ENST00000406938 MRPL30Q8TCC3 161 aaKnown RBP17.03■□□□□ 0.32
CHKB-201ENST00000406938 MAFIPQ8WZ33 124 aa17.03■□□□□ 0.32
CHKB-201ENST00000406938 FAM234AQ9H0X4 552 aa17.03■□□□□ 0.32
CHKB-201ENST00000406938 INPP1P49441 399 aa17.03■□□□□ 0.32
CHKB-201ENST00000406938 SSBP1Q04837 148 aaKnown RBP17.03■□□□□ 0.32
CHKB-201ENST00000406938 GAPTQ8N292 157 aa17.03■□□□□ 0.32
CHKB-201ENST00000406938 FGFRL1Q8N441 504 aa17.03■□□□□ 0.32
CHKB-201ENST00000406938 OR4K15Q8NH41 348 aa17.03■□□□□ 0.32
CHKB-201ENST00000406938 ST6GALNAC5Q9BVH7 336 aa17.03■□□□□ 0.32
CHKB-201ENST00000406938 BPESC1Q9GZL8 116 aa17.03■□□□□ 0.32
CHKB-201ENST00000406938 NARFLQ9H6Q4 476 aa17.03■□□□□ 0.32
CHKB-201ENST00000406938 PALMDQ9NP74 551 aa17.03■□□□□ 0.32
CHKB-201ENST00000406938 BEX4Q9NWD9 120 aaPredicted RBP17.03■□□□□ 0.32
CHKB-201ENST00000406938 ANAPC10Q9UM13 185 aa17.03■□□□□ 0.32
CHKB-201ENST00000406938 TMEM30CPA0ZSE6 113 aa17.02■□□□□ 0.31
CHKB-201ENST00000406938 FCN3O75636 299 aa17.02■□□□□ 0.31
CHKB-201ENST00000406938 RCVRNP35243 200 aa17.02■□□□□ 0.31
CHKB-201ENST00000406938 PAX5Q02548 391 aa17.02■□□□□ 0.31
CHKB-201ENST00000406938 KRBOX4Q5JUW0 171 aa17.02■□□□□ 0.31
CHKB-201ENST00000406938 GDPD3Q7L5L3 318 aa17.02■□□□□ 0.31
CHKB-201ENST00000406938 LYSMD2Q8IV50 215 aa17.02■□□□□ 0.31
CHKB-201ENST00000406938 SPICQ8N5J4 248 aa17.02■□□□□ 0.31
CHKB-201ENST00000406938 TPRX1Q8N7U7 411 aa17.02■□□□□ 0.31
CHKB-201ENST00000406938 OR5D13Q8NGL4 314 aa17.02■□□□□ 0.31
CHKB-201ENST00000406938 FAM168AQ92567 244 aa17.02■□□□□ 0.31
CHKB-201ENST00000406938 RIMS4Q9H426 269 aaPredicted RBP17.02■□□□□ 0.31
CHKB-201ENST00000406938 SLC25A10Q9UBX3 287 aaPredicted RBP17.02■□□□□ 0.31
CHKB-201ENST00000406938 POLQO75417 2590 aa17.02■□□□□ 0.31
CHKB-201ENST00000406938 APCP25054 2843 aa17.02■□□□□ 0.31
CHKB-201ENST00000406938 RPS2P15880 293 aaKnown RBP17.01■□□□□ 0.31
CHKB-201ENST00000406938 GLIPR1P48060 266 aa17.01■□□□□ 0.31
CHKB-201ENST00000406938 DEFB113Q30KQ7 82 aa17.01■□□□□ 0.31
CHKB-201ENST00000406938 ZNF57Q68EA5 555 aaPredicted RBP17.01■□□□□ 0.31
CHKB-201ENST00000406938 SLC35E4Q6ICL7 350 aa17.01■□□□□ 0.31
CHKB-201ENST00000406938 OR52W1Q6IF63 320 aa17.01■□□□□ 0.31
CHKB-201ENST00000406938 CLEC2AQ6UVW9 174 aa17.01■□□□□ 0.31
CHKB-201ENST00000406938 HOGA1Q86XE5 327 aa17.01■□□□□ 0.31
CHKB-201ENST00000406938 TOMM5Q8N4H5 51 aa17.01■□□□□ 0.31
CHKB-201ENST00000406938 SETD6Q8TBK2 473 aa17.01■□□□□ 0.31
CHKB-201ENST00000406938 SNAPC3Q92966 411 aa17.01■□□□□ 0.31
CHKB-201ENST00000406938 KIF25Q9UIL4 384 aa17.01■□□□□ 0.31
CHKB-201ENST00000406938 TRBV6-6A0A0A6YYG2 114 aa17■□□□□ 0.31
CHKB-201ENST00000406938 LINC00854A0A1B0GVQ3 168 aa17■□□□□ 0.31
CHKB-201ENST00000406938 H7C1Q1 480 aa17■□□□□ 0.31
CHKB-201ENST00000406938 DVL1O14640 695 aa17■□□□□ 0.31
CHKB-201ENST00000406938 NDUFB3O43676 98 aa17■□□□□ 0.31
CHKB-201ENST00000406938 MT-ND4P03905 459 aa17■□□□□ 0.31
CHKB-201ENST00000406938 CSF1P09603 554 aa17■□□□□ 0.31
CHKB-201ENST00000406938 P2RX3P56373 397 aa17■□□□□ 0.31
CHKB-201ENST00000406938 EDDM3BP56851 147 aa17■□□□□ 0.31
CHKB-201ENST00000406938 KLF9Q13886 244 aaPredicted RBP17■□□□□ 0.31
CHKB-201ENST00000406938 C10orf105Q8TEF2 133 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms