RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 GTF2BQ00403 316 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 TMEM42Q69YG0 159 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 TMEM205Q6UW68 189 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 EPGNQ6UW88 154 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 CASP12Q6UXS9 341 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 SLC16A13Q7RTY0 426 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 RIMKLAQ8IXN7 391 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 ZNF738Q8NE65 137 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 OR2Z1Q8NG97 314 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 OR1M1Q8NGA1 313 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 OR10G6Q8NH81 332 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 CD200R1Q8TD46 325 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 TLCD1Q96CP7 247 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 CDCA4Q9BXL8 241 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 TLNRD1Q9H1K6 362 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 ARV1Q9H2C2 271 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 TMEM27Q9HBJ8 222 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 NIT2Q9NQR4 276 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 BIN3Q9NQY0 253 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 DHCR7Q9UBM7 475 aaKnown RBP3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 RPS6KB2Q9UBS0 482 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 ZNF391Q9UJN7 358 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 TFR2Q9UP52 801 aa3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 DHX57Q6P158 1386 aaKnown RBP3.23□□□□□ -1.89
HMGB1P13-201ENST00000406019 ABCB11O95342 1321 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 CEP162Q5TB80 1403 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 IGLV1-50A0A075B6I6 118 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 TRAV8-7A0A075B6U6 113 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 CCDC160A6NGH7 325 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 M0R036 132 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 KCNK1O00180 336 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 GLSO94925 669 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 ATP6V1G2O95670 118 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 GPR75O95800 540 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 SLC25A27O95847 323 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 PTTG1O95997 202 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 IFNA10P01566 189 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 ORM1P02763 201 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 S100A8P05109 93 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 ZNF35P13682 527 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 CXCR1P25024 350 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 GGT2P36268 569 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 CD200P41217 278 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 DNASE1L1P49184 302 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 RBP2P50120 134 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 CDKN2DP55273 166 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 GFERP55789 205 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 OR10A3P58181 314 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 MAXP61244 160 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 SMIM21Q3B7S5 101 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 AKIRIN2Q53H80 203 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 TFDP3Q5H9I0 405 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 TCEAL5Q5H9L2 206 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 FAM27D1Q5T7N8 215 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 LCE3AQ5TA76 89 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 STEAP4Q687X5 459 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 DRAM2Q6UX65 266 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 Q6ZVH6 145 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 GRINAQ7Z429 371 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 ANGPTL5Q86XS5 388 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 SLC30A8Q8IWU4 369 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 CA13Q8N1Q1 262 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 SMIM20Q8N5G0 67 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 OR2M7Q8NG81 312 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 OR5AK3PQ8NH89 298 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 C11orf40Q8WZ69 217 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 SMIM12Q96EX1 92 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 RDH12Q96NR8 316 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 OR2A5Q96R48 311 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 TIMM17AQ99595 171 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 KLF6Q99612 283 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 SLC25A39Q9BZJ4 359 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 VCXQ9H320 206 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 NMNAT1Q9HAN9 279 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 SS18L2Q9UHA2 77 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 VAX2Q9UIW0 290 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 FARSAQ9Y285 508 aaKnown RBP3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 ARL5AQ9Y689 179 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
HMGB1P13-201ENST00000406019 ZNF532Q9HCE3 1301 aa3.21□□□□□ -1.89
HMGB1P13-201ENST00000406019 CCDC144AA2RUR9 1427 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 CPSF1Q10570 1443 aaKnown RBP3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 FAM135BQ49AJ0 1406 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 ADAMTS13Q76LX8 1427 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 SMIM26A0A096LP01 95 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 TGIF2-C20orf24A0A0A6YYL0 155 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 IGHV5-10-1A0A0J9YXX1 117 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 SMIM9A6NGZ8 99 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 OR11H12B2RN74 326 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 TRIM49D1C9J1S8 452 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 G3V2T6 193 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 PLPP3O14495 311 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 SLC16A4O15374 487 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 MPZL2O60487 215 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 PTHP01270 115 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 OR5AL1P0C617 328 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 AKR1C4P17516 323 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 AKR1C3P42330 323 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 LGALS7P47929 136 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 RHOAP61586 193 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms