RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 TMEM167BQ9NRX6 74 aa11.78□□□□□ -0.52
SNED1-205ENST00000405547 THSD7AQ9UPZ6 1657 aa11.78□□□□□ -0.52
SNED1-205ENST00000405547 FCGR3BO75015 233 aa11.78□□□□□ -0.52
SNED1-205ENST00000405547 VAX1Q5SQQ9 334 aa11.78□□□□□ -0.52
SNED1-205ENST00000405547 OR5D13Q8NGL4 314 aa11.78□□□□□ -0.52
SNED1-205ENST00000405547 AMDHD2Q9Y303 409 aa11.78□□□□□ -0.52
SNED1-205ENST00000405547 ROS1P08922 2347 aa11.78□□□□□ -0.52
SNED1-205ENST00000405547 TEX50A0A1B0GTY4 177 aa11.77□□□□□ -0.52
SNED1-205ENST00000405547 PDE6DO43924 150 aa11.77□□□□□ -0.52
SNED1-205ENST00000405547 AMTP48728 403 aa11.77□□□□□ -0.52
SNED1-205ENST00000405547 NCMAPQ5T1S8 102 aa11.77□□□□□ -0.52
SNED1-205ENST00000405547 A0A1B0GU03 582 aa11.77□□□□□ -0.52
SNED1-205ENST00000405547 GATCO43716 136 aaKnown RBP11.77□□□□□ -0.52
SNED1-205ENST00000405547 OPRK1P41145 380 aa11.77□□□□□ -0.52
SNED1-205ENST00000405547 KHDC3LQ587J8 217 aa11.77□□□□□ -0.52
SNED1-205ENST00000405547 FAM78BQ5VT40 261 aa11.77□□□□□ -0.52
SNED1-205ENST00000405547 PET117Q6UWS5 81 aa11.77□□□□□ -0.52
SNED1-205ENST00000405547 LRP11Q86VZ4 500 aa11.77□□□□□ -0.52
SNED1-205ENST00000405547 C11orf94C9JXX5 98 aa11.77□□□□□ -0.53
SNED1-205ENST00000405547 H3BQ15 152 aa11.77□□□□□ -0.53
SNED1-205ENST00000405547 TMIGD3P0DMS9 266 aaPredicted RBP11.77□□□□□ -0.53
SNED1-205ENST00000405547 LIMS1P48059 325 aa11.77□□□□□ -0.53
SNED1-205ENST00000405547 MPV17LQ2QL34 196 aa11.77□□□□□ -0.53
SNED1-205ENST00000405547 RHBDD2Q6NTF9 364 aa11.77□□□□□ -0.53
SNED1-205ENST00000405547 PTP4A3O75365 173 aa11.77□□□□□ -0.53
SNED1-205ENST00000405547 HLA-DQB1P01920 261 aa11.77□□□□□ -0.53
SNED1-205ENST00000405547 ZFP36L2P47974 494 aaKnown RBP11.77□□□□□ -0.53
SNED1-205ENST00000405547 OR10G8Q8NGN5 311 aa11.77□□□□□ -0.53
SNED1-205ENST00000405547 CHST5Q9GZS9 411 aa11.77□□□□□ -0.53
SNED1-205ENST00000405547 GAPDHP04406 335 aaKnown RBP11.77□□□□□ -0.53
SNED1-205ENST00000405547 ERVS71-1P61550 626 aa11.77□□□□□ -0.53
SNED1-205ENST00000405547 OR10C1Q96KK4 312 aa11.77□□□□□ -0.53
SNED1-205ENST00000405547 GABRG3Q99928 467 aa11.77□□□□□ -0.53
SNED1-205ENST00000405547 SF3B5Q9BWJ5 86 aaKnown RBP11.77□□□□□ -0.53
SNED1-205ENST00000405547 ANGPTL4Q9BY76 406 aa11.77□□□□□ -0.53
SNED1-205ENST00000405547 OR6C3Q9NZP0 311 aa11.77□□□□□ -0.53
SNED1-205ENST00000405547 MBD1Q9UIS9 605 aaPredicted RBP11.77□□□□□ -0.53
SNED1-205ENST00000405547 OR11G2Q8NGC1 345 aa11.77□□□□□ -0.53
SNED1-205ENST00000405547 OR10AD1Q8NGE0 317 aa11.77□□□□□ -0.53
SNED1-205ENST00000405547 OR10AC1Q8NH08 325 aa11.77□□□□□ -0.53
SNED1-205ENST00000405547 SEBOXQ9HB31 216 aaPredicted RBP11.77□□□□□ -0.53
SNED1-205ENST00000405547 TMEM9BQ9NQ34 198 aa11.77□□□□□ -0.53
SNED1-205ENST00000405547 A0A1W2PN81 502 aa11.76□□□□□ -0.53
SNED1-205ENST00000405547 GEMIN2O14893 280 aaKnown RBP11.76□□□□□ -0.53
SNED1-205ENST00000405547 GYPAP02724 150 aa11.76□□□□□ -0.53
SNED1-205ENST00000405547 UBE2V2Q15819 145 aa11.76□□□□□ -0.53
SNED1-205ENST00000405547 Q3ZCU0 254 aa11.76□□□□□ -0.53
SNED1-205ENST00000405547 STUMQ69YW2 141 aa11.76□□□□□ -0.53
SNED1-205ENST00000405547 OR1L4Q8NGR5 311 aa11.76□□□□□ -0.53
SNED1-205ENST00000405547 ZMIZ1Q9ULJ6 1067 aa11.76□□□□□ -0.53
SNED1-205ENST00000405547 PSG11Q9UQ72 335 aa11.76□□□□□ -0.53
SNED1-205ENST00000405547 LSM11P83369 360 aaKnown RBP eCLIP11.76□□□□□ -0.53
SNED1-205ENST00000405547 RNASEKQ6P5S7 137 aaKnown RBP11.76□□□□□ -0.53
SNED1-205ENST00000405547 ZFP64Q9NPA5 681 aa11.76□□□□□ -0.53
SNED1-205ENST00000405547 ANKRD34CP0C6C1 535 aa11.76□□□□□ -0.53
SNED1-205ENST00000405547 OR1C1Q15619 314 aa11.76□□□□□ -0.53
SNED1-205ENST00000405547 ADTRPQ96IZ2 230 aa11.76□□□□□ -0.53
SNED1-205ENST00000405547 PCOLCE2Q9UKZ9 415 aa11.76□□□□□ -0.53
SNED1-205ENST00000405547 TRIOBPQ9H2D6 2365 aa11.76□□□□□ -0.53
SNED1-205ENST00000405547 NTN1O95631 604 aa11.76□□□□□ -0.53
SNED1-205ENST00000405547 NANOS3P60323 173 aaKnown RBP11.76□□□□□ -0.53
SNED1-205ENST00000405547 C1QL3Q5VWW1 255 aa11.76□□□□□ -0.53
SNED1-205ENST00000405547 THADAQ6YHU6 1953 aa11.76□□□□□ -0.53
SNED1-205ENST00000405547 SMIM17P0DL12 118 aa11.76□□□□□ -0.53
SNED1-205ENST00000405547 DAOP14920 347 aa11.76□□□□□ -0.53
SNED1-205ENST00000405547 SULT1A2P50226 295 aa11.76□□□□□ -0.53
SNED1-205ENST00000405547 SSPNQ14714 243 aa11.76□□□□□ -0.53
SNED1-205ENST00000405547 LINC00596Q86U02 117 aa11.76□□□□□ -0.53
SNED1-205ENST00000405547 IL22RA2Q969J5 263 aa11.76□□□□□ -0.53
SNED1-205ENST00000405547 GOLT1BQ9Y3E0 138 aa11.76□□□□□ -0.53
SNED1-205ENST00000405547 OR5H1A6NKK0 313 aa11.76□□□□□ -0.53
SNED1-205ENST00000405547 C2CD4DB7Z1M9 353 aa11.76□□□□□ -0.53
SNED1-205ENST00000405547 VSIG8P0DPA2 414 aa11.76□□□□□ -0.53
SNED1-205ENST00000405547 PPP1CAP62136 330 aa11.76□□□□□ -0.53
SNED1-205ENST00000405547 HOGA1Q86XE5 327 aa11.76□□□□□ -0.53
SNED1-205ENST00000405547 TDHQ8IZJ6 230 aa11.76□□□□□ -0.53
SNED1-205ENST00000405547 LYG1Q8N1E2 194 aa11.76□□□□□ -0.53
SNED1-205ENST00000405547 OR4S2Q8NH73 311 aa11.76□□□□□ -0.53
SNED1-205ENST00000405547 IL36GQ9NZH8 169 aa11.76□□□□□ -0.53
SNED1-205ENST00000405547 ACSM6Q6P461 480 aa11.75□□□□□ -0.53
SNED1-205ENST00000405547 POU2F2P09086 479 aa11.75□□□□□ -0.53
SNED1-205ENST00000405547 EWSR1Q01844 656 aaKnown RBP eCLIP11.75□□□□□ -0.53
SNED1-205ENST00000405547 ELOBQ15370 118 aa11.75□□□□□ -0.53
SNED1-205ENST00000405547 NCOR1O75376 2440 aa11.75□□□□□ -0.53
SNED1-205ENST00000405547 OOEPA6NGQ2 149 aa11.75□□□□□ -0.53
SNED1-205ENST00000405547 PITX3O75364 302 aa11.75□□□□□ -0.53
SNED1-205ENST00000405547 TNFSF15O95150 251 aa11.75□□□□□ -0.53
SNED1-205ENST00000405547 NSUN5P2Q63ZY6 315 aa11.75□□□□□ -0.53
SNED1-205ENST00000405547 WDR74Q6RFH5 385 aaPredicted RBP11.75□□□□□ -0.53
SNED1-205ENST00000405547 FSTP19883 344 aa11.75□□□□□ -0.53
SNED1-205ENST00000405547 HLA-BQ31612 363 aa11.75□□□□□ -0.53
SNED1-205ENST00000405547 RNF2Q99496 336 aa11.75□□□□□ -0.53
SNED1-205ENST00000405547 SIRT4Q9Y6E7 314 aaPredicted RBP11.75□□□□□ -0.53
SNED1-205ENST00000405547 SLC25A5P05141 298 aaKnown RBP11.75□□□□□ -0.53
SNED1-205ENST00000405547 ZNF273Q14593 569 aa11.75□□□□□ -0.53
SNED1-205ENST00000405547 ACER2Q5QJU3 275 aa11.75□□□□□ -0.53
SNED1-205ENST00000405547 LINC01565O15544 149 aa11.75□□□□□ -0.53
SNED1-205ENST00000405547 EFNB2P52799 333 aa11.75□□□□□ -0.53
SNED1-205ENST00000405547 PLA2G2FQ9BZM2 168 aa11.75□□□□□ -0.53
SNED1-205ENST00000405547 GSX1Q9H4S2 264 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms