RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 MEX3BQ6ZN04 569 aaKnown RBP17.08■□□□□ 0.33
CCDC47-202ENST00000403162 OR14L1PQ8NHC6 308 aa17.08■□□□□ 0.33
CCDC47-202ENST00000403162 ABHD14BQ96IU4 210 aa17.08■□□□□ 0.33
CCDC47-202ENST00000403162 TMEM38BQ9NVV0 291 aa17.08■□□□□ 0.33
CCDC47-202ENST00000403162 PTPRBP23467 1997 aa17.08■□□□□ 0.32
CCDC47-202ENST00000403162 SHANK1Q9Y566 2161 aa17.08■□□□□ 0.32
CCDC47-202ENST00000403162 hCG_38984A0A1B0GV85 526 aa17.08■□□□□ 0.32
CCDC47-202ENST00000403162 MED19A0JLT2 244 aaPredicted RBP17.08■□□□□ 0.32
CCDC47-202ENST00000403162 BTBD17A6NE02 478 aa17.08■□□□□ 0.32
CCDC47-202ENST00000403162 CLN5O75503 358 aa17.08■□□□□ 0.32
CCDC47-202ENST00000403162 ATP6V0CP27449 155 aa17.08■□□□□ 0.32
CCDC47-202ENST00000403162 PRSS12P56730 875 aa17.08■□□□□ 0.32
CCDC47-202ENST00000403162 OR2B8PP59922 312 aa17.08■□□□□ 0.32
CCDC47-202ENST00000403162 HIKESHIQ53FT3 197 aa17.08■□□□□ 0.32
CCDC47-202ENST00000403162 HEPN1Q6WQI6 88 aa17.08■□□□□ 0.32
CCDC47-202ENST00000403162 OR2G3Q8NGZ4 309 aa17.08■□□□□ 0.32
CCDC47-202ENST00000403162 POM121Q96HA1 1249 aa17.08■□□□□ 0.32
CCDC47-202ENST00000403162 TMEM56Q96MV1 263 aa17.08■□□□□ 0.32
CCDC47-202ENST00000403162 RARRES2Q99969 163 aa17.08■□□□□ 0.32
CCDC47-202ENST00000403162 UNKLQ9H9P5 680 aaKnown RBP17.08■□□□□ 0.32
CCDC47-202ENST00000403162 SH2D2AQ9NP31 389 aa17.08■□□□□ 0.32
CCDC47-202ENST00000403162 SLC7A11Q9UPY5 501 aa17.08■□□□□ 0.32
CCDC47-202ENST00000403162 TMEM56-RWDD3S4R434 201 aa17.08■□□□□ 0.32
CCDC47-202ENST00000403162 CFAP54Q96N23 3096 aa17.07■□□□□ 0.32
CCDC47-202ENST00000403162 IGHV1-45A0A0A0MS14 117 aa17.07■□□□□ 0.32
CCDC47-202ENST00000403162 IGSF23A1L1A6 192 aa17.07■□□□□ 0.32
CCDC47-202ENST00000403162 NKX2-6A6NCS4 301 aa17.07■□□□□ 0.32
CCDC47-202ENST00000403162 RBFOX3A6NFN3 312 aa17.07■□□□□ 0.32
CCDC47-202ENST00000403162 FAM24AA6NFZ4 105 aa17.07■□□□□ 0.32
CCDC47-202ENST00000403162 OR2C1O95371 312 aa17.07■□□□□ 0.32
CCDC47-202ENST00000403162 FUT3P21217 361 aa17.07■□□□□ 0.32
CCDC47-202ENST00000403162 S100PP25815 95 aa17.07■□□□□ 0.32
CCDC47-202ENST00000403162 NKX2-1P43699 371 aaPredicted RBP17.07■□□□□ 0.32
CCDC47-202ENST00000403162 RPS18P62269 152 aaKnown RBP17.07■□□□□ 0.32
CCDC47-202ENST00000403162 CPT1CQ8TCG5 803 aa17.07■□□□□ 0.32
CCDC47-202ENST00000403162 SPIN2AQ99865 258 aa17.07■□□□□ 0.32
CCDC47-202ENST00000403162 SPIN2BQ9BPZ2 258 aa17.07■□□□□ 0.32
CCDC47-202ENST00000403162 PLEKHF2Q9H8W4 249 aa17.07■□□□□ 0.32
CCDC47-202ENST00000403162 GJE1A6NN92 205 aa17.06■□□□□ 0.32
CCDC47-202ENST00000403162 ZNF32P17041 273 aa17.06■□□□□ 0.32
CCDC47-202ENST00000403162 HTR5AP47898 357 aa17.06■□□□□ 0.32
CCDC47-202ENST00000403162 SPSB3Q6PJ21 355 aa17.06■□□□□ 0.32
CCDC47-202ENST00000403162 TECTBQ96PL2 329 aa17.06■□□□□ 0.32
CCDC47-202ENST00000403162 CRLF2Q9HC73 371 aa17.06■□□□□ 0.32
CCDC47-202ENST00000403162 TCFL5Q9UL49 500 aa17.06■□□□□ 0.32
CCDC47-202ENST00000403162 PUS1Q9Y606 427 aaKnown RBP eCLIP17.06■□□□□ 0.32
CCDC47-202ENST00000403162 A0A1B0GV50 99 aa17.06■□□□□ 0.32
CCDC47-202ENST00000403162 PPIHO43447 177 aaKnown RBP17.06■□□□□ 0.32
CCDC47-202ENST00000403162 ASCL1P50553 236 aa17.06■□□□□ 0.32
CCDC47-202ENST00000403162 RND3P61587 244 aa17.06■□□□□ 0.32
CCDC47-202ENST00000403162 Q6ZS49 121 aa17.06■□□□□ 0.32
CCDC47-202ENST00000403162 AKR7LQ8NHP1 331 aa17.06■□□□□ 0.32
CCDC47-202ENST00000403162 IMMP1LQ96LU5 166 aa17.06■□□□□ 0.32
CCDC47-202ENST00000403162 SLC25A31Q9H0C2 315 aa17.06■□□□□ 0.32
CCDC47-202ENST00000403162 TMPRSS5Q9H3S3 457 aa17.06■□□□□ 0.32
CCDC47-202ENST00000403162 ZNF442Q9H7R0 627 aa17.06■□□□□ 0.32
CCDC47-202ENST00000403162 LYRM2Q9NU23 88 aaPredicted RBP17.06■□□□□ 0.32
CCDC47-202ENST00000403162 MIOXQ9UGB7 285 aa17.06■□□□□ 0.32
CCDC47-202ENST00000403162 ZNF724A8MTY0 619 aa17.05■□□□□ 0.32
CCDC47-202ENST00000403162 GPR37O15354 613 aa17.05■□□□□ 0.32
CCDC47-202ENST00000403162 SSR4P51571 173 aa17.05■□□□□ 0.32
CCDC47-202ENST00000403162 RAC3P60763 192 aa17.05■□□□□ 0.32
CCDC47-202ENST00000403162 CCL20P78556 96 aa17.05■□□□□ 0.32
CCDC47-202ENST00000403162 DAZAP2Q15038 168 aaPredicted RBP17.05■□□□□ 0.32
CCDC47-202ENST00000403162 SP5Q6BEB4 398 aaPredicted RBP17.05■□□□□ 0.32
CCDC47-202ENST00000403162 DPPA2Q7Z7J5 298 aa17.05■□□□□ 0.32
CCDC47-202ENST00000403162 NAXEQ8NCW5 288 aa17.05■□□□□ 0.32
CCDC47-202ENST00000403162 MUCL1Q96DR8 90 aa17.05■□□□□ 0.32
CCDC47-202ENST00000403162 JSRP1Q96MG2 331 aaPredicted RBP17.05■□□□□ 0.32
CCDC47-202ENST00000403162 PAPOLGQ9BWT3 736 aaKnown RBP17.05■□□□□ 0.32
CCDC47-202ENST00000403162 ZNF700Q9H0M5 742 aa17.05■□□□□ 0.32
CCDC47-202ENST00000403162 KIAA1456Q9P272 454 aa17.05■□□□□ 0.32
CCDC47-202ENST00000403162 CDRT15L2A8MXV6 281 aa17.05■□□□□ 0.32
CCDC47-202ENST00000403162 TXNL1O43396 289 aa17.05■□□□□ 0.32
CCDC47-202ENST00000403162 GNRHRP30968 328 aa17.05■□□□□ 0.32
CCDC47-202ENST00000403162 POLR2GP62487 172 aaKnown RBP eCLIP17.05■□□□□ 0.32
CCDC47-202ENST00000403162 ZNF92Q03936 586 aa17.05■□□□□ 0.32
CCDC47-202ENST00000403162 PLCXD3Q63HM9 321 aa17.05■□□□□ 0.32
CCDC47-202ENST00000403162 TMEM171Q8WVE6 324 aa17.05■□□□□ 0.32
CCDC47-202ENST00000403162 HS3ST3B1Q9Y662 390 aa17.05■□□□□ 0.32
CCDC47-202ENST00000403162 G3V3Y1 287 aa17.04■□□□□ 0.32
CCDC47-202ENST00000403162 HSPA12AO43301 675 aa17.04■□□□□ 0.32
CCDC47-202ENST00000403162 CBR3O75828 277 aa17.04■□□□□ 0.32
CCDC47-202ENST00000403162 NTF4P34130 210 aa17.04■□□□□ 0.32
CCDC47-202ENST00000403162 PSG4Q00888 419 aa17.04■□□□□ 0.32
CCDC47-202ENST00000403162 IGSF11Q5DX21 431 aa17.04■□□□□ 0.32
CCDC47-202ENST00000403162 ZNF695Q8IW36 515 aa17.04■□□□□ 0.32
CCDC47-202ENST00000403162 TMEM252Q8N6L7 170 aa17.04■□□□□ 0.32
CCDC47-202ENST00000403162 ASCL3Q9NQ33 180 aa17.04■□□□□ 0.32
CCDC47-202ENST00000403162 A0A087WWC5 75 aa17.04■□□□□ 0.32
CCDC47-202ENST00000403162 ZNF816-ZNF321PA0A0X1KG74 233 aa17.04■□□□□ 0.32
CCDC47-202ENST00000403162 DUXBA0A1W2PPF3 345 aa17.04■□□□□ 0.32
CCDC47-202ENST00000403162 CLEC18AA5D8T8 446 aa17.04■□□□□ 0.32
CCDC47-202ENST00000403162 ZNF732B4DXR9 585 aa17.04■□□□□ 0.32
CCDC47-202ENST00000403162 C21orf140B9A014 251 aa17.04■□□□□ 0.32
CCDC47-202ENST00000403162 COX6A1P12074 109 aa17.04■□□□□ 0.32
CCDC47-202ENST00000403162 B4GALT1P15291 398 aa17.04■□□□□ 0.32
CCDC47-202ENST00000403162 CD82P27701 267 aa17.04■□□□□ 0.32
CCDC47-202ENST00000403162 OTX2P32243 289 aa17.04■□□□□ 0.32
CCDC47-202ENST00000403162 PDCD1Q15116 288 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms