RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 OSTM1Q86WC4 334 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 OR52I1Q8NGK6 324 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 OR52I2Q8NH67 350 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 TWSG1Q9GZX9 223 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 ZDHHC18Q9NUE0 388 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 TAS2R4Q9NYW5 299 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 A0A1B0GU03 582 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 C5orf49A4QMS7 147 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 IGKV5-2P06315 115 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 TNFRSF4P43489 277 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 EVX2Q03828 476 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 TMEM170BQ5T4T1 132 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 DMRTA1Q5VZB9 504 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 C10orf111Q8N326 155 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 OR4X2Q8NGF9 303 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 LYRM4Q9HD34 91 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 FOXK2Q01167 660 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 SIX1Q15475 284 aaPredicted RBP7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 EGLN2Q96KS0 407 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 TNFRSF6BO95407 300 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 PRF1P14222 555 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 OR10D3Q8NH80 312 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 SDHCQ99643 169 aaPredicted RBP7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 PRNDQ9UKY0 176 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 USP32Q8NFA0 1604 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 ZNF56Q15929 161 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 ZNF511Q8NB15 262 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 TCRBV3S1A0A5B6 114 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 C7orf72A4D263 438 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 B3GALT4O96024 378 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 TRACP01848 142 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 CST5P28325 142 aaPredicted RBP7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 SPSB1Q96BD6 273 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 PAAF1Q9BRP4 392 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 HIGD1AQ9Y241 93 aa7.67□□□□□ -1.18
CACNA1C-220ENST00000399655 FUT3P21217 361 aa7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 UCP3P55916 312 aa7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 SNRPD3P62318 126 aaKnown RBP7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 C9orf153Q5TBE3 101 aa7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 DSCR3O14972 297 aa7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 EGR2P11161 476 aaPredicted RBP7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 ZNF385CQ66K41 422 aaPredicted RBP7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 CDCA4Q9BXL8 241 aa7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 TECPR2O15040 1411 aa7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 ZNF98A6NK75 572 aa7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 TSPAN2O60636 221 aa7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 SPANXB1Q9NS25 103 aaPredicted RBP7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 ASAH2BP0C7U1 165 aa7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 GPR35Q9HC97 309 aa7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 PLPP1O14494 284 aa7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 TOMM40O96008 361 aa7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 RPS4XP62701 263 aaKnown RBP7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 UBE2WQ96B02 151 aa7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 TBL2Q9Y4P3 447 aaKnown RBP7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 R4GMQ9 66 aa7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 A0A1W2PQU0 124 aa7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 GFRA2O00451 464 aa7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 NANOGP1Q8N7R0 232 aa7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 CDKN2AP42771 156 aaKnown RBP7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 PARP4Q9UKK3 1724 aaKnown RBP7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 IDSB3KWA1 339 aa7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 GPX2P18283 190 aa7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 LAMTOR3Q9UHA4 124 aa7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 HSF4Q9ULV5 492 aa7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 SCAND1P57086 179 aa7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 CTU1Q7Z7A3 348 aaKnown RBP7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 PRNTQ86SH4 94 aa7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 RDH5Q92781 318 aa7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 TMEM106BQ9NUM4 274 aa7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 CTXND1A0A1B0GTU2 59 aa7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 HPXP02790 462 aa7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 STARD6P59095 220 aa7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 NCMAPQ5T1S8 102 aa7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 OR52M1Q8NGK5 317 aa7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 HSPB7Q9UBY9 170 aa7.66□□□□□ -1.18
CACNA1C-220ENST00000399655 HSD11B1LQ7Z5J1 315 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 TMEM45BQ96B21 275 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 TMED7-TICAM2A0A0A6YYA0 188 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 IFITM5A6NNB3 132 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 NME4O00746 187 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 SPINT3P49223 89 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 SLC25A1P53007 311 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 C1orf140Q5VVS0 124 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 DOK4Q8TEW6 326 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 SMIM4Q8WVI0 70 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 ABHD1Q96SE0 405 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 OPN3Q9H1Y3 402 aaPredicted RBP7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 SMOC1Q9H4F8 434 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 TMED7Q9Y3B3 224 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 A0A1B0GTH9 108 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 M0R1B8 84 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 GJB3O75712 270 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 P2RY1P47900 373 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 INHBCP55103 352 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 GPNMBQ14956 572 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 DEFB118Q96PH6 123 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 NTMT1Q9BV86 223 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 PPIL1Q9Y3C6 166 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 USF3Q68DE3 2245 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 TRAV1-2A0A0B4J238 106 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms