RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 IDH3GP51553 393 aaPredicted RBP8.55□□□□□ -1.04
PTCHD4-202ENST00000398738 ELLP55199 621 aaPredicted RBP8.55□□□□□ -1.04
PTCHD4-202ENST00000398738 UCP2P55851 309 aa8.55□□□□□ -1.04
PTCHD4-202ENST00000398738 OR1D5P58170 312 aa8.55□□□□□ -1.04
PTCHD4-202ENST00000398738 MLF1P58340 268 aa8.55□□□□□ -1.04
PTCHD4-202ENST00000398738 IL13RA2Q14627 380 aa8.55□□□□□ -1.04
PTCHD4-202ENST00000398738 TESK1Q15569 626 aa8.55□□□□□ -1.04
PTCHD4-202ENST00000398738 ZNF787Q6DD87 383 aa8.55□□□□□ -1.04
PTCHD4-202ENST00000398738 OR1L3Q8NH93 324 aa8.55□□□□□ -1.04
PTCHD4-202ENST00000398738 NUDT16L1Q9BRJ7 211 aaKnown RBP8.55□□□□□ -1.04
PTCHD4-202ENST00000398738 GPR87Q9BY21 358 aa8.55□□□□□ -1.04
PTCHD4-202ENST00000398738 KIAA1456Q9P272 454 aa8.55□□□□□ -1.04
PTCHD4-202ENST00000398738 OR14J1Q9UGF5 321 aa8.55□□□□□ -1.04
PTCHD4-202ENST00000398738 KIAA2026Q5HYC2 2103 aa8.55□□□□□ -1.04
PTCHD4-202ENST00000398738 TMEM50AO95807 157 aa8.55□□□□□ -1.04
PTCHD4-202ENST00000398738 IGHV4-34P06331 123 aa8.55□□□□□ -1.04
PTCHD4-202ENST00000398738 SUCLG1P53597 346 aaKnown RBP8.55□□□□□ -1.04
PTCHD4-202ENST00000398738 DCAF7P61962 342 aa8.55□□□□□ -1.04
PTCHD4-202ENST00000398738 CRIP3Q6Q6R5 217 aa8.55□□□□□ -1.04
PTCHD4-202ENST00000398738 RPUSD4Q96CM3 377 aaKnown RBP8.55□□□□□ -1.04
PTCHD4-202ENST00000398738 MRPL13Q9BYD1 178 aaKnown RBP8.55□□□□□ -1.04
PTCHD4-202ENST00000398738 METTL9Q9H1A3 318 aa8.55□□□□□ -1.04
PTCHD4-202ENST00000398738 VSIRQ9H7M9 311 aa8.55□□□□□ -1.04
PTCHD4-202ENST00000398738 BCO1Q9HAY6 547 aa8.55□□□□□ -1.04
PTCHD4-202ENST00000398738 ST3GAL6Q9Y274 331 aa8.55□□□□□ -1.04
PTCHD4-202ENST00000398738 FREM2Q5SZK8 3169 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 C3orf85A0A1B0GTC6 90 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 A0A1W2PQD3 144 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 M0R135 149 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 LCATP04180 440 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 BEND4Q6ZU67 534 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 OR10G3Q8NGC4 313 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 ZNF799Q96GE5 643 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 CBLN4Q9NTU7 201 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 AURKAIP1Q9NWT8 199 aaPredicted RBP8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 PIAS3Q9Y6X2 628 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 XKRY2A2RUG3 117 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 CLDN34H7C241 214 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 DHRS3O75911 302 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 CNOT4O95628 575 aaKnown RBP8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 BMP5P22003 454 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 RTP5Q14D33 572 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 ARL6IP1Q15041 203 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 P2RY6Q15077 328 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 PRSS8Q16651 343 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 ZNF66Q6ZN08 573 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 MRPL41Q8IXM3 137 aaKnown RBP8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 BORCS8Q96FH0 119 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 MOB1AQ9H8S9 216 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 PNRC2Q9NPJ4 139 aaKnown RBP8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 ALKBH4Q9NXW9 302 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 MUC22E2RYF6 1773 aaPredicted RBP8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 TRBV11-1A0A0K0K1C0 115 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 A0A1W2PPQ1 181 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 TRAF3IP2O43734 574 aaPredicted RBP8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 GZMBP10144 247 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 IAPPP10997 89 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 RPS16P62249 146 aaKnown RBP8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 COL10A1Q03692 680 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 TBC1D26Q86UD7 250 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 OR4X1Q8NH49 305 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 OR51H1Q8NH63 302 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 CLDND2Q8NHS1 167 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 C18orf12Q96KH6 178 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 Q96M66 194 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 PRO3102Q9H379 93 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 PLEKHF2Q9H8W4 249 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 MMACHCQ9Y4U1 282 aa8.54□□□□□ -1.04
PTCHD4-202ENST00000398738 IGKV3D-11A0A0A0MRZ8 115 aa8.53□□□□□ -1.04
PTCHD4-202ENST00000398738 ANKUB1A6NFN9 424 aa8.53□□□□□ -1.04
PTCHD4-202ENST00000398738 C9J4A7 227 aa8.53□□□□□ -1.04
PTCHD4-202ENST00000398738 AMBPP02760 352 aa8.53□□□□□ -1.04
PTCHD4-202ENST00000398738 TLE4Q04727 773 aa8.53□□□□□ -1.04
PTCHD4-202ENST00000398738 ZP4Q12836 540 aa8.53□□□□□ -1.04
PTCHD4-202ENST00000398738 BATFQ16520 125 aa8.53□□□□□ -1.04
PTCHD4-202ENST00000398738 PHYHD1Q5SRE7 291 aa8.53□□□□□ -1.04
PTCHD4-202ENST00000398738 UBALD1Q8TB05 177 aa8.53□□□□□ -1.04
PTCHD4-202ENST00000398738 M1APQ8TC57 530 aa8.53□□□□□ -1.04
PTCHD4-202ENST00000398738 PIGCQ92535 297 aa8.53□□□□□ -1.04
PTCHD4-202ENST00000398738 SLC7A10Q9NS82 523 aa8.53□□□□□ -1.04
PTCHD4-202ENST00000398738 PTPRSQ13332 1948 aa8.53□□□□□ -1.04
PTCHD4-202ENST00000398738 IGKV1-27A0A075B6S5 117 aa8.53□□□□□ -1.04
PTCHD4-202ENST00000398738 MPPED1O15442 326 aa8.53□□□□□ -1.04
PTCHD4-202ENST00000398738 SCGB1D1O95968 90 aa8.53□□□□□ -1.04
PTCHD4-202ENST00000398738 FGF7P21781 194 aa8.53□□□□□ -1.04
PTCHD4-202ENST00000398738 DLX2Q07687 328 aaPredicted RBP8.53□□□□□ -1.04
PTCHD4-202ENST00000398738 PMS2P11Q13670 270 aa8.53□□□□□ -1.04
PTCHD4-202ENST00000398738 Q6ZS52 159 aa8.53□□□□□ -1.04
PTCHD4-202ENST00000398738 ZNF385AQ96PM9 386 aaKnown RBP8.53□□□□□ -1.04
PTCHD4-202ENST00000398738 HIST1H2AAQ96QV6 131 aa8.53□□□□□ -1.04
PTCHD4-202ENST00000398738 PLK3Q9H4B4 646 aa8.53□□□□□ -1.04
PTCHD4-202ENST00000398738 ZNF286AQ9HBT8 521 aa8.53□□□□□ -1.04
PTCHD4-202ENST00000398738 RPRMQ9NS64 109 aa8.53□□□□□ -1.04
PTCHD4-202ENST00000398738 TMED3Q9Y3Q3 217 aa8.53□□□□□ -1.04
PTCHD4-202ENST00000398738 PPYP01298 95 aa8.52□□□□□ -1.04
PTCHD4-202ENST00000398738 CCNOP22674 350 aa8.52□□□□□ -1.04
PTCHD4-202ENST00000398738 GPR137CQ8N3F9 429 aa8.52□□□□□ -1.04
PTCHD4-202ENST00000398738 ST8SIA1Q92185 356 aa8.52□□□□□ -1.04
PTCHD4-202ENST00000398738 DDA1Q9BW61 102 aa8.52□□□□□ -1.04
PTCHD4-202ENST00000398738 OBP2AQ9NY56 170 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms