RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 TP53RKQ96S44 253 aa8.99□□□□□ -0.97
CPSF1P1-201ENST00000397477 TMEM9BQ9NQ34 198 aa8.99□□□□□ -0.97
CPSF1P1-201ENST00000397477 DUSP13Q9UII6 198 aa8.99□□□□□ -0.97
CPSF1P1-201ENST00000397477 KLF13Q9Y2Y9 288 aaPredicted RBP8.99□□□□□ -0.97
CPSF1P1-201ENST00000397477 SPTAN1Q13813 2472 aaKnown RBP8.99□□□□□ -0.97
CPSF1P1-201ENST00000397477 OTX1P32242 354 aaPredicted RBP8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 TM2D1Q9BX74 207 aa8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 PUS1Q9Y606 427 aaKnown RBP eCLIP8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 CDRT15L2A8MXV6 281 aa8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 GPR37O15354 613 aa8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 TFF1P04155 84 aa8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 CELA3BP08861 270 aa8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 MUC1P15941 1255 aaPredicted RBP8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 LHX2P50458 406 aa8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 LHFPL1Q86WI0 220 aa8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 OR10J5Q8NHC4 309 aa8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 LILRB1Q8NHL6 650 aaPredicted RBP8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 ZPBPQ9BS86 351 aa8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 OR2J1Q9GZK6 312 aa8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 FAM234AQ9H0X4 552 aa8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 DNTTIP1Q9H147 329 aa8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 SH3BGRL3Q9H299 93 aa8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 LPAR3Q9UBY5 353 aa8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 GLS2Q9UI32 602 aa8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 SH3BGRL2Q9UJC5 107 aa8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 TNRC18O15417 2968 aaPredicted RBP8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 CRYM-AS1A6NIL9 109 aa8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 E5RGE8 158 aa8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 RNASEK-C17orf49H0YIS7 233 aa8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 JTBO76095 146 aa8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 SFTA3P0C7M3 94 aa8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 PJVKQ0ZLH3 352 aa8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 CXorf66Q5JRM2 361 aaPredicted RBP8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 ETV3LQ6ZN32 361 aa8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 LIAT1Q6ZQX7 453 aa8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 RFESDQ8TAC1 157 aa8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 PHYHIPLQ96FC7 376 aa8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 SUCNR1Q9BXA5 334 aa8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 FAM212BQ9NTI7 297 aaPredicted RBP8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 NSG2Q9Y328 171 aa8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 APC2O95996 2303 aa8.98□□□□□ -0.97
CPSF1P1-201ENST00000397477 MPPED1O15442 326 aa8.97□□□□□ -0.97
CPSF1P1-201ENST00000397477 DNPH1O43598 174 aa8.97□□□□□ -0.97
CPSF1P1-201ENST00000397477 NPBWR1P48145 328 aa8.97□□□□□ -0.97
CPSF1P1-201ENST00000397477 MRPL49Q13405 166 aaKnown RBP8.97□□□□□ -0.97
CPSF1P1-201ENST00000397477 EDDM3AQ14507 147 aa8.97□□□□□ -0.97
CPSF1P1-201ENST00000397477 TPRX1Q8N7U7 411 aa8.97□□□□□ -0.97
CPSF1P1-201ENST00000397477 OR1J1Q8NGS3 322 aa8.97□□□□□ -0.97
CPSF1P1-201ENST00000397477 OR2G3Q8NGZ4 309 aa8.97□□□□□ -0.97
CPSF1P1-201ENST00000397477 NANOS1Q8WY41 292 aaKnown RBP8.97□□□□□ -0.97
CPSF1P1-201ENST00000397477 UQCC1Q9NVA1 299 aa8.97□□□□□ -0.97
CPSF1P1-201ENST00000397477 MTCH1Q9NZJ7 389 aa8.97□□□□□ -0.97
CPSF1P1-201ENST00000397477 AUP1Q9Y679 476 aa8.97□□□□□ -0.97
CPSF1P1-201ENST00000397477 CST4P01036 141 aa8.97□□□□□ -0.97
CPSF1P1-201ENST00000397477 HOXA6P31267 233 aa8.97□□□□□ -0.97
CPSF1P1-201ENST00000397477 GFRA1P56159 465 aa8.97□□□□□ -0.97
CPSF1P1-201ENST00000397477 CLDN18P56856 261 aa8.97□□□□□ -0.97
CPSF1P1-201ENST00000397477 TRIP6Q15654 476 aaKnown RBP8.97□□□□□ -0.97
CPSF1P1-201ENST00000397477 HAGHQ16775 308 aa8.97□□□□□ -0.97
CPSF1P1-201ENST00000397477 C10orf35Q96D05 121 aa8.97□□□□□ -0.97
CPSF1P1-201ENST00000397477 SPACA1Q9HBV2 294 aa8.97□□□□□ -0.97
CPSF1P1-201ENST00000397477 TINAGQ9UJW2 476 aa8.97□□□□□ -0.97
CPSF1P1-201ENST00000397477 COL4A2P08572 1712 aa8.97□□□□□ -0.97
CPSF1P1-201ENST00000397477 GLAP06280 429 aa8.97□□□□□ -0.97
CPSF1P1-201ENST00000397477 S100A6P06703 90 aa8.97□□□□□ -0.97
CPSF1P1-201ENST00000397477 CBR1P16152 277 aa8.97□□□□□ -0.97
CPSF1P1-201ENST00000397477 ARR3P36575 388 aa8.97□□□□□ -0.97
CPSF1P1-201ENST00000397477 DEFB109BQ30KR1 87 aa8.97□□□□□ -0.97
CPSF1P1-201ENST00000397477 RIPPLY2Q5TAB7 128 aa8.97□□□□□ -0.97
CPSF1P1-201ENST00000397477 ABLIM2Q6H8Q1 611 aa8.97□□□□□ -0.97
CPSF1P1-201ENST00000397477 FAM58AQ8N1B3 248 aa8.97□□□□□ -0.97
CPSF1P1-201ENST00000397477 GLYATL2Q8WU03 294 aa8.97□□□□□ -0.97
CPSF1P1-201ENST00000397477 A0A1W2PNU3 283 aaPredicted RBP8.96□□□□□ -0.97
CPSF1P1-201ENST00000397477 DBX1A6NMT0 343 aa8.96□□□□□ -0.97
CPSF1P1-201ENST00000397477 SNAPINO95295 136 aa8.96□□□□□ -0.97
CPSF1P1-201ENST00000397477 CYC1P08574 325 aa8.96□□□□□ -0.97
CPSF1P1-201ENST00000397477 ECI1P42126 302 aa8.96□□□□□ -0.97
CPSF1P1-201ENST00000397477 TGFBR3Q03167 851 aa8.96□□□□□ -0.97
CPSF1P1-201ENST00000397477 SURF2Q15527 256 aaPredicted RBP8.96□□□□□ -0.97
CPSF1P1-201ENST00000397477 SHEQ5VZ18 495 aa8.96□□□□□ -0.97
CPSF1P1-201ENST00000397477 ZNF826PQ6ZT77 177 aa8.96□□□□□ -0.97
CPSF1P1-201ENST00000397477 SUMF2Q8NBJ7 301 aa8.96□□□□□ -0.97
CPSF1P1-201ENST00000397477 OR10Z1Q8NGY1 313 aa8.96□□□□□ -0.97
CPSF1P1-201ENST00000397477 ISOC2Q96AB3 205 aa8.96□□□□□ -0.97
CPSF1P1-201ENST00000397477 ADGRG7Q96K78 797 aa8.96□□□□□ -0.97
CPSF1P1-201ENST00000397477 NUDT16L1Q9BRJ7 211 aaKnown RBP8.96□□□□□ -0.97
CPSF1P1-201ENST00000397477 IER2Q9BTL4 223 aa8.96□□□□□ -0.97
CPSF1P1-201ENST00000397477 SH2D2AQ9NP31 389 aa8.96□□□□□ -0.97
CPSF1P1-201ENST00000397477 CYTL1Q9NRR1 136 aa8.96□□□□□ -0.97
CPSF1P1-201ENST00000397477 DEDDO75618 318 aa8.96□□□□□ -0.97
CPSF1P1-201ENST00000397477 HLA-GP17693 338 aa8.96□□□□□ -0.97
CPSF1P1-201ENST00000397477 DTYMKP23919 212 aa8.96□□□□□ -0.97
CPSF1P1-201ENST00000397477 TMEM267Q0VDI3 215 aaPredicted RBP8.96□□□□□ -0.97
CPSF1P1-201ENST00000397477 PEA15Q15121 130 aa8.96□□□□□ -0.97
CPSF1P1-201ENST00000397477 TBC1D28Q2M2D7 210 aa8.96□□□□□ -0.97
CPSF1P1-201ENST00000397477 ZNF818PQ6ZRF7 136 aa8.96□□□□□ -0.97
CPSF1P1-201ENST00000397477 MARVELD3Q96A59 401 aa8.96□□□□□ -0.97
CPSF1P1-201ENST00000397477 C14orf79Q96F83 325 aa8.96□□□□□ -0.97
CPSF1P1-201ENST00000397477 DEFB108AA8MXU0 73 aa8.96□□□□□ -0.98
CPSF1P1-201ENST00000397477 TERTO14746 1132 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms