RNA–Protein interactions for RNA: ENST00000396858.5

GAPDH-203, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-203ENST00000396858 GDNFP39905 211 aa11.73□□□□□ -0.53
GAPDH-203ENST00000396858 MRPS15P82914 257 aaKnown RBP11.73□□□□□ -0.53
GAPDH-203ENST00000396858 RBM39Q14498 530 aaKnown RBP11.73□□□□□ -0.53
GAPDH-203ENST00000396858 KCNJ8Q15842 424 aa11.73□□□□□ -0.53
GAPDH-203ENST00000396858 RSBN1Q5VWQ0 802 aaPredicted RBP11.73□□□□□ -0.53
GAPDH-203ENST00000396858 SHEQ5VZ18 495 aa11.73□□□□□ -0.53
GAPDH-203ENST00000396858 CLEC2AQ6UVW9 174 aa11.73□□□□□ -0.53
GAPDH-203ENST00000396858 GVQW1Q8N7I0 195 aa11.73□□□□□ -0.53
GAPDH-203ENST00000396858 TPRX1Q8N7U7 411 aa11.73□□□□□ -0.53
GAPDH-203ENST00000396858 SETD6Q8TBK2 473 aa11.73□□□□□ -0.53
GAPDH-203ENST00000396858 MRPL30Q8TCC3 161 aaKnown RBP11.73□□□□□ -0.53
GAPDH-203ENST00000396858 C15orf40Q8WUR7 153 aa11.73□□□□□ -0.53
GAPDH-203ENST00000396858 SNX22Q96L94 193 aa11.73□□□□□ -0.53
GAPDH-203ENST00000396858 LURAP1Q96LR2 239 aa11.73□□□□□ -0.53
GAPDH-203ENST00000396858 DNTTIP1Q9H147 329 aa11.73□□□□□ -0.53
GAPDH-203ENST00000396858 SEBOXQ9HB31 216 aaPredicted RBP11.73□□□□□ -0.53
GAPDH-203ENST00000396858 SCPEP1Q9HB40 452 aa11.73□□□□□ -0.53
GAPDH-203ENST00000396858 IFT46Q9NQC8 304 aa11.73□□□□□ -0.53
GAPDH-203ENST00000396858 BEX4Q9NWD9 120 aaPredicted RBP11.73□□□□□ -0.53
GAPDH-203ENST00000396858 KLK11Q9UBX7 282 aa11.73□□□□□ -0.53
GAPDH-203ENST00000396858 TACC2O95359 2948 aa11.73□□□□□ -0.53
GAPDH-203ENST00000396858 TRAV39A0A0B4J263 110 aa11.72□□□□□ -0.53
GAPDH-203ENST00000396858 TMEM30CPA0ZSE6 113 aa11.72□□□□□ -0.53
GAPDH-203ENST00000396858 MEX3AA1L020 520 aaKnown RBP11.72□□□□□ -0.53
GAPDH-203ENST00000396858 K7N7A8 449 aa11.72□□□□□ -0.53
GAPDH-203ENST00000396858 TNFRSF13BO14836 293 aaPredicted RBP11.72□□□□□ -0.53
GAPDH-203ENST00000396858 CA11O75493 328 aa11.72□□□□□ -0.53
GAPDH-203ENST00000396858 UPK1BO75841 260 aa11.72□□□□□ -0.53
GAPDH-203ENST00000396858 TK1P04183 234 aa11.72□□□□□ -0.53
GAPDH-203ENST00000396858 GLAP06280 429 aa11.72□□□□□ -0.53
GAPDH-203ENST00000396858 RCVRNP35243 200 aa11.72□□□□□ -0.53
GAPDH-203ENST00000396858 TMEM33P57088 247 aa11.72□□□□□ -0.53
GAPDH-203ENST00000396858 AESQ08117 197 aa11.72□□□□□ -0.53
GAPDH-203ENST00000396858 DEFB113Q30KQ7 82 aa11.72□□□□□ -0.53
GAPDH-203ENST00000396858 TMEM155Q4W5P6 130 aa11.72□□□□□ -0.53
GAPDH-203ENST00000396858 ATPAF1Q5TC12 328 aaPredicted RBP11.72□□□□□ -0.53
GAPDH-203ENST00000396858 ZNF497Q6ZNH5 498 aa11.72□□□□□ -0.53
GAPDH-203ENST00000396858 DNM1P46Q6ZS02 220 aa11.72□□□□□ -0.53
GAPDH-203ENST00000396858 SLC36A1Q7Z2H8 476 aa11.72□□□□□ -0.53
GAPDH-203ENST00000396858 SPICQ8N5J4 248 aa11.72□□□□□ -0.53
GAPDH-203ENST00000396858 OR4K15Q8NH41 348 aa11.72□□□□□ -0.53
GAPDH-203ENST00000396858 FCAMRQ8WWV6 532 aa11.72□□□□□ -0.53
GAPDH-203ENST00000396858 FAM168AQ92567 244 aa11.72□□□□□ -0.53
GAPDH-203ENST00000396858 PIMREGQ9BSJ6 248 aa11.72□□□□□ -0.53
GAPDH-203ENST00000396858 SHARPINQ9H0F6 387 aa11.72□□□□□ -0.53
GAPDH-203ENST00000396858 ZNF230Q9UIE0 474 aaPredicted RBP11.72□□□□□ -0.53
GAPDH-203ENST00000396858 KIF25Q9UIL4 384 aa11.72□□□□□ -0.53
GAPDH-203ENST00000396858 NAV2Q8IVL1 2488 aa11.71□□□□□ -0.53
GAPDH-203ENST00000396858 IGHV4-30-2A0A087WSY4 118 aa11.71□□□□□ -0.53
GAPDH-203ENST00000396858 SULT1C2O00338 296 aa11.71□□□□□ -0.53
GAPDH-203ENST00000396858 MGST3O14880 152 aa11.71□□□□□ -0.53
GAPDH-203ENST00000396858 FSTL3O95633 263 aa11.71□□□□□ -0.53
GAPDH-203ENST00000396858 NAPSAO96009 420 aa11.71□□□□□ -0.53
GAPDH-203ENST00000396858 CSN2P05814 226 aa11.71□□□□□ -0.53
GAPDH-203ENST00000396858 GIFP27352 417 aa11.71□□□□□ -0.53
GAPDH-203ENST00000396858 GLP1RP43220 463 aa11.71□□□□□ -0.53
GAPDH-203ENST00000396858 KCNJ3P48549 501 aa11.71□□□□□ -0.53
GAPDH-203ENST00000396858 P2RX3P56373 397 aa11.71□□□□□ -0.53
GAPDH-203ENST00000396858 EDDM3BP56851 147 aa11.71□□□□□ -0.53
GAPDH-203ENST00000396858 ACTBP60709 375 aa11.71□□□□□ -0.53
GAPDH-203ENST00000396858 SEC61A1P61619 476 aaKnown RBP11.71□□□□□ -0.53
GAPDH-203ENST00000396858 ACTG1P63261 375 aa11.71□□□□□ -0.53
GAPDH-203ENST00000396858 IFITM3Q01628 133 aa11.71□□□□□ -0.53
GAPDH-203ENST00000396858 KRBOX4Q5JUW0 171 aa11.71□□□□□ -0.53
GAPDH-203ENST00000396858 STEAP3Q658P3 488 aa11.71□□□□□ -0.53
GAPDH-203ENST00000396858 OR52W1Q6IF63 320 aa11.71□□□□□ -0.53
GAPDH-203ENST00000396858 C16orf87Q6PH81 154 aa11.71□□□□□ -0.53
GAPDH-203ENST00000396858 PPP1R35Q8TAP8 253 aa11.71□□□□□ -0.53
GAPDH-203ENST00000396858 C10orf105Q8TEF2 133 aa11.71□□□□□ -0.53
GAPDH-203ENST00000396858 SNAPC3Q92966 411 aa11.71□□□□□ -0.53
GAPDH-203ENST00000396858 THAP7Q9BT49 309 aaPredicted RBP11.71□□□□□ -0.53
GAPDH-203ENST00000396858 SLC25A10Q9UBX3 287 aaPredicted RBP11.71□□□□□ -0.53
GAPDH-203ENST00000396858 MTFP1Q9UDX5 166 aa11.71□□□□□ -0.53
GAPDH-203ENST00000396858 ANAPC10Q9UM13 185 aa11.71□□□□□ -0.53
GAPDH-203ENST00000396858 RBMX2Q9Y388 322 aaKnown RBP11.71□□□□□ -0.53
GAPDH-203ENST00000396858 IGKV1D-8A0A087WSZ0 117 aa11.7□□□□□ -0.54
GAPDH-203ENST00000396858 LINC00854A0A1B0GVQ3 168 aa11.7□□□□□ -0.54
GAPDH-203ENST00000396858 DVL1O14640 695 aa11.7□□□□□ -0.54
GAPDH-203ENST00000396858 NDUFB7P17568 137 aa11.7□□□□□ -0.54
GAPDH-203ENST00000396858 DTYMKP23919 212 aa11.7□□□□□ -0.54
GAPDH-203ENST00000396858 GLIPR1P48060 266 aa11.7□□□□□ -0.54
GAPDH-203ENST00000396858 INPP1P49441 399 aa11.7□□□□□ -0.54
GAPDH-203ENST00000396858 ZNF57Q68EA5 555 aaPredicted RBP11.7□□□□□ -0.54
GAPDH-203ENST00000396858 GDPD3Q7L5L3 318 aa11.7□□□□□ -0.54
GAPDH-203ENST00000396858 OR8B3Q8NGG8 313 aa11.7□□□□□ -0.54
GAPDH-203ENST00000396858 CCDC107Q8WV48 283 aa11.7□□□□□ -0.54
GAPDH-203ENST00000396858 MED30Q96HR3 178 aa11.7□□□□□ -0.54
GAPDH-203ENST00000396858 OR8B2Q96RD0 313 aa11.7□□□□□ -0.54
GAPDH-203ENST00000396858 ST6GALNAC5Q9BVH7 336 aa11.7□□□□□ -0.54
GAPDH-203ENST00000396858 FAM234AQ9H0X4 552 aa11.7□□□□□ -0.54
GAPDH-203ENST00000396858 KAAG1Q9UBP8 84 aa11.7□□□□□ -0.54
GAPDH-203ENST00000396858 EDARQ9UNE0 448 aa11.7□□□□□ -0.54
GAPDH-203ENST00000396858 APCP25054 2843 aa11.7□□□□□ -0.54
GAPDH-203ENST00000396858 ANKRD17O75179 2603 aaKnown RBP11.7□□□□□ -0.54
GAPDH-203ENST00000396858 MEIKINA0A087WXM9 373 aa11.69□□□□□ -0.54
GAPDH-203ENST00000396858 F5H0A9 414 aaPredicted RBP11.69□□□□□ -0.54
GAPDH-203ENST00000396858 NDUFB3O43676 98 aa11.69□□□□□ -0.54
GAPDH-203ENST00000396858 NDUFA2O43678 99 aa11.69□□□□□ -0.54
GAPDH-203ENST00000396858 ORC5O43913 435 aa11.69□□□□□ -0.54
GAPDH-203ENST00000396858 CBX5P45973 191 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms