RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 MRPS24Q96EL2 167 aaKnown RBP8.51□□□□□ -1.05
NEDD8-202ENST00000396828 URM1Q9BTM9 101 aaKnown RBP8.51□□□□□ -1.05
NEDD8-202ENST00000396828 TMEM59Q9BXS4 323 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 WDR12Q9GZL7 423 aaKnown RBP8.51□□□□□ -1.05
NEDD8-202ENST00000396828 SIRPDQ9H106 197 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 ABCG5Q9H222 651 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 MIXL1Q9H2W2 232 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 FN3KRPQ9HA64 309 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 DIABLOQ9NR28 239 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 RHBDL2Q9NX52 303 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 IL36GQ9NZH8 169 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 RNF7Q9UBF6 113 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 RABL2AQ9UBK7 228 aaPredicted RBP8.51□□□□□ -1.05
NEDD8-202ENST00000396828 EXTL2Q9UBQ6 330 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 DUX4Q9UBX2 424 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 RABL2BQ9UNT1 228 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 MMP24Q9Y5R2 645 aa8.51□□□□□ -1.05
NEDD8-202ENST00000396828 A0A0U1RQK1 487 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 FABP12A6NFH5 140 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 TMEM14DPA8MWL7 114 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 LGALS8O00214 317 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 CDIPTO14735 213 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 LDLRAD4O15165 306 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 ADAM20O43506 726 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 ENSAO43768 121 aaKnown RBP8.5□□□□□ -1.05
NEDD8-202ENST00000396828 TOX4O94842 621 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 MPIG6BO95866 241 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 IGHV4-59P01825 116 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 EIF4EP06730 217 aaKnown RBP8.5□□□□□ -1.05
NEDD8-202ENST00000396828 MGMTP16455 207 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 MPZP25189 248 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 ETV6P41212 452 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 RAG2P55895 527 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 DLX1P56177 255 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 ARF6P62330 175 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 QRFPP83859 136 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 PITPNAQ00169 270 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 RAB12Q6IQ22 244 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 CNIH2Q6PI25 160 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 FAM131AQ6UXB0 335 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 BAIAP2L2Q6UXY1 529 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 WDR86Q86TI4 376 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 CCDC190Q86UF4 302 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 C11orf53Q8IXP5 236 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 CMTM4Q8IZR5 234 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 OSR2Q8N2R0 312 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 GCSAMQ8N6F7 178 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 OR11L1Q8NGX0 322 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 OR10K1Q8NGX5 313 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 C15orf40Q8WUR7 153 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 LHX4Q969G2 390 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 ERGIC1Q969X5 290 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 SLAMF9Q96A28 289 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 SLC25A38Q96DW6 304 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 SEH1LQ96EE3 360 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 TLNRD1Q9H1K6 362 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 KCNK15Q9H427 330 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 C1orf123Q9NWV4 160 aa8.5□□□□□ -1.05
NEDD8-202ENST00000396828 A0A0A6YYH2 397 aa8.49□□□□□ -1.05
NEDD8-202ENST00000396828 IGKV1-12A0A0C4DH73 117 aa8.49□□□□□ -1.05
NEDD8-202ENST00000396828 hCG_1807616A0A1W2PRN6 198 aa8.49□□□□□ -1.05
NEDD8-202ENST00000396828 OOEPA6NGQ2 149 aa8.49□□□□□ -1.05
NEDD8-202ENST00000396828 A6NJ64 397 aa8.49□□□□□ -1.05
NEDD8-202ENST00000396828 H3BUI4 141 aa8.49□□□□□ -1.05
NEDD8-202ENST00000396828 SYNGR1O43759 233 aa8.49□□□□□ -1.05
NEDD8-202ENST00000396828 KNG1P01042 644 aa8.49□□□□□ -1.05
NEDD8-202ENST00000396828 LHBP01229 141 aa8.49□□□□□ -1.05
NEDD8-202ENST00000396828 IGKV1D-12P01611 117 aa8.49□□□□□ -1.05
NEDD8-202ENST00000396828 CHRM2P08172 466 aa8.49□□□□□ -1.05
NEDD8-202ENST00000396828 ACAA1P09110 424 aaPredicted RBP8.49□□□□□ -1.05
NEDD8-202ENST00000396828 BCL3P20749 454 aa8.49□□□□□ -1.05
NEDD8-202ENST00000396828 PTBP1P26599 531 aaKnown RBP eCLIP8.49□□□□□ -1.057e-6■□□□□ 9.8
NEDD8-202ENST00000396828 EFNB2P52799 333 aa8.49□□□□□ -1.05
NEDD8-202ENST00000396828 RPS27AP62979 156 aaKnown RBP8.49□□□□□ -1.05
NEDD8-202ENST00000396828 UNC119Q13432 240 aa8.49□□□□□ -1.05
NEDD8-202ENST00000396828 IL18Q14116 193 aa8.49□□□□□ -1.05
NEDD8-202ENST00000396828 TMEM69Q5SWH9 247 aa8.49□□□□□ -1.05
NEDD8-202ENST00000396828 OLFML2AQ68BL7 652 aa8.49□□□□□ -1.05
NEDD8-202ENST00000396828 ELP2Q6IA86 826 aa8.49□□□□□ -1.05
NEDD8-202ENST00000396828 OR10K2Q6IF99 312 aa8.49□□□□□ -1.05
NEDD8-202ENST00000396828 BTN2A1Q7KYR7 527 aa8.49□□□□□ -1.05
NEDD8-202ENST00000396828 FAM90A1Q86YD7 464 aa8.49□□□□□ -1.05
NEDD8-202ENST00000396828 TMEM104Q8NE00 496 aa8.49□□□□□ -1.05
NEDD8-202ENST00000396828 OR4M1Q8NGD0 313 aa8.49□□□□□ -1.05
NEDD8-202ENST00000396828 OR56B1Q8NGI3 324 aa8.49□□□□□ -1.05
NEDD8-202ENST00000396828 OR51T1Q8NGJ9 327 aa8.49□□□□□ -1.05
NEDD8-202ENST00000396828 CITED1Q99966 193 aa8.49□□□□□ -1.05
NEDD8-202ENST00000396828 SELENOIQ9C0D9 397 aa8.49□□□□□ -1.05
NEDD8-202ENST00000396828 BANF2Q9H503 90 aa8.49□□□□□ -1.05
NEDD8-202ENST00000396828 BEX1Q9HBH7 125 aa8.49□□□□□ -1.05
NEDD8-202ENST00000396828 AKIP1Q9NQ31 210 aa8.49□□□□□ -1.05
NEDD8-202ENST00000396828 MTCH1Q9NZJ7 389 aa8.49□□□□□ -1.05
NEDD8-202ENST00000396828 IGHV1-69DA0A0B4J2H0 117 aa8.48□□□□□ -1.05
NEDD8-202ENST00000396828 CLPSL1A2RUU4 121 aa8.48□□□□□ -1.05
NEDD8-202ENST00000396828 DVL1O14640 695 aa8.48□□□□□ -1.05
NEDD8-202ENST00000396828 XRCC3O43542 346 aa8.48□□□□□ -1.05
NEDD8-202ENST00000396828 RHBDL1O75783 438 aa8.48□□□□□ -1.05
NEDD8-202ENST00000396828 TPPPO94811 219 aa8.48□□□□□ -1.05
NEDD8-202ENST00000396828 NDUFA7O95182 113 aa8.48□□□□□ -1.05
NEDD8-202ENST00000396828 IGHV1-69P01742 117 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms