RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 OR2AE1Q8NHA4 323 aa11.48□□□□□ -0.57
TRIM40-207ENST00000396581 GNPNAT1Q96EK6 184 aaPredicted RBP11.48□□□□□ -0.57
TRIM40-207ENST00000396581 SPIN2AQ99865 258 aa11.48□□□□□ -0.57
TRIM40-207ENST00000396581 SPIN2BQ9BPZ2 258 aa11.48□□□□□ -0.57
TRIM40-207ENST00000396581 RFNGQ9Y644 331 aa11.48□□□□□ -0.57
TRIM40-207ENST00000396581 MYO7BQ6PIF6 2116 aa11.48□□□□□ -0.57
TRIM40-207ENST00000396581 NPIPA2E9PIF3 369 aa11.48□□□□□ -0.57
TRIM40-207ENST00000396581 NPIPA3F8WFD2 350 aa11.48□□□□□ -0.57
TRIM40-207ENST00000396581 NRASP01111 189 aa11.48□□□□□ -0.57
TRIM40-207ENST00000396581 CXCL1P09341 107 aa11.48□□□□□ -0.57
TRIM40-207ENST00000396581 GNRHRP30968 328 aa11.48□□□□□ -0.57
TRIM40-207ENST00000396581 TAGLN2P37802 199 aaKnown RBP11.48□□□□□ -0.57
TRIM40-207ENST00000396581 HERV-K104P61576 105 aa11.48□□□□□ -0.57
TRIM40-207ENST00000396581 ID3Q02535 119 aa11.48□□□□□ -0.57
TRIM40-207ENST00000396581 GPR137CQ8N3F9 429 aa11.48□□□□□ -0.57
TRIM40-207ENST00000396581 ZFP62Q8NB50 900 aaPredicted RBP11.48□□□□□ -0.57
TRIM40-207ENST00000396581 Q8NFD4 153 aa11.48□□□□□ -0.57
TRIM40-207ENST00000396581 RBMXL1Q96E39 390 aaKnown RBP11.48□□□□□ -0.57
TRIM40-207ENST00000396581 ULBP2Q9BZM5 246 aa11.48□□□□□ -0.57
TRIM40-207ENST00000396581 GAR1Q9NY12 217 aaKnown RBP11.48□□□□□ -0.57
TRIM40-207ENST00000396581 DKKL1Q9UK85 242 aa11.48□□□□□ -0.57
TRIM40-207ENST00000396581 ST3GAL6Q9Y274 331 aa11.48□□□□□ -0.57
TRIM40-207ENST00000396581 CFAP54Q96N23 3096 aa11.48□□□□□ -0.57
TRIM40-207ENST00000396581 OTOGLQ3ZCN5 2332 aa11.48□□□□□ -0.57
TRIM40-207ENST00000396581 KMT2EQ8IZD2 1858 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 OR6C6A6NF89 314 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 ZNF727A8MUV8 499 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 CDRT15L2A8MXV6 281 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 SEC14L6B5MCN3 397 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 TP53I11O14683 189 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 CST2P09228 141 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 TCN2P20062 427 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 GLIPR1P48060 266 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 ASCL1P50553 236 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 FUT6P51993 359 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 RBM11P57052 281 aaKnown RBP11.47□□□□□ -0.57
TRIM40-207ENST00000396581 ERVFRD-1P60508 538 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 UBE2KP61086 200 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 DLK1P80370 383 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 MALLQ13021 153 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 KHDC3LQ587J8 217 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 SELENOHQ8IZQ5 122 aaKnown RBP11.47□□□□□ -0.57
TRIM40-207ENST00000396581 SUMF1Q8NBK3 374 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 OR1F12Q8NHA8 337 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 CLDND2Q8NHS1 167 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 ZNF837Q96EG3 531 aaPredicted RBP11.47□□□□□ -0.57
TRIM40-207ENST00000396581 TVP23CQ96ET8 276 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 SIGLEC12Q96PQ1 595 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 UCN2Q96RP3 112 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 GLRX2Q9NS18 164 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 C19orf25Q9UFG5 118 aaPredicted RBP11.47□□□□□ -0.57
TRIM40-207ENST00000396581 MMP24Q9Y5R2 645 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 LIPGQ9Y5X9 500 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 EP300Q09472 2414 aaPredicted RBP11.47□□□□□ -0.57
TRIM40-207ENST00000396581 TRAV1-1A0A0B4J248 108 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 A0A1B0GV50 99 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 hCG_38984A0A1B0GV85 526 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 FAM221AA4D161 298 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 H0YL77 283 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 ITGA3P26006 1051 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 NOVA1P51513 510 aaKnown RBP11.47□□□□□ -0.57
TRIM40-207ENST00000396581 NMSQ5H8A3 153 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 BRICD5Q6PL45 260 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 MEX3BQ6ZN04 569 aaKnown RBP11.47□□□□□ -0.57
TRIM40-207ENST00000396581 ZNF429Q86V71 674 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 DEFB126Q9BYW3 111 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 WSB1Q9Y6I7 421 aa11.47□□□□□ -0.57
TRIM40-207ENST00000396581 COL27A1Q8IZC6 1860 aaPredicted RBP11.46□□□□□ -0.57
TRIM40-207ENST00000396581 FAM90A10PA6NDY2 464 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 FAM90A18PA6NE21 464 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 FAM90A16PA6NEW6 464 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 FAM90A20PA6NIJ5 464 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 FAM90A8PA6NJQ4 464 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 FAM90A7PA6NKC0 464 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 FAM90A22PA8MWA6 464 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 FAM90A12PA8MX19 464 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 FAM90A5PA8MXJ8 464 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 FAM90A23PA8MXZ1 464 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 B4DEV8 164 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 HIST1H2BKO60814 126 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 KLF7O75840 302 aaPredicted RBP11.46□□□□□ -0.57
TRIM40-207ENST00000396581 F10P00742 488 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 HIST1H2BJP06899 126 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 FAM90A15PP0C7V4 464 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 FAM90A13PP0C7W8 464 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 FAM90A14PP0C7W9 464 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 FAM90A24PP0C7X0 464 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 FUT3P21217 361 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 HIST1H2BOP23527 126 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 S100A2P29034 98 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 HIST1H2BBP33778 126 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 HAAOP46952 286 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 NDUFA6P56556 154 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 HIST1H2BDP58876 126 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 HIST1H2BCP62807 126 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 HIST2H2BEQ16778 126 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.46□□□□□ -0.57
TRIM40-207ENST00000396581 PRAMEF20Q5VT98 475 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 ZNF343Q6P1L6 599 aa11.46□□□□□ -0.57
TRIM40-207ENST00000396581 DPPA2Q7Z7J5 298 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms