RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 FAM76BQ5HYJ3 339 aa13.1□□□□□ -0.31
CPSF7-202ENST00000394888 SELENOHQ8IZQ5 122 aaKnown RBP13.1□□□□□ -0.31
CPSF7-202ENST00000394888 TMEM171Q8WVE6 324 aa13.1□□□□□ -0.31
CPSF7-202ENST00000394888 ZNF292O60281 2723 aa13.1□□□□□ -0.31
CPSF7-202ENST00000394888 CD300LBA8K4G0 201 aa13.1□□□□□ -0.31
CPSF7-202ENST00000394888 ITGA3P26006 1051 aa13.1□□□□□ -0.31
CPSF7-202ENST00000394888 DUSP1P28562 367 aa13.1□□□□□ -0.31
CPSF7-202ENST00000394888 FHITP49789 147 aa13.1□□□□□ -0.31
CPSF7-202ENST00000394888 ERVK11-1P61568 191 aa13.1□□□□□ -0.31
CPSF7-202ENST00000394888 ZNF324BQ6AW86 544 aaPredicted RBP13.1□□□□□ -0.31
CPSF7-202ENST00000394888 DHRS7BQ6IAN0 325 aaPredicted RBP13.1□□□□□ -0.31
CPSF7-202ENST00000394888 BOD1Q96IK1 185 aa13.1□□□□□ -0.31
CPSF7-202ENST00000394888 HOXA4Q00056 320 aaPredicted RBP13.09□□□□□ -0.31
CPSF7-202ENST00000394888 CBLN2Q8IUK8 224 aa13.09□□□□□ -0.31
CPSF7-202ENST00000394888 GAPTQ8N292 157 aa13.09□□□□□ -0.31
CPSF7-202ENST00000394888 C17orf78Q8N4C9 275 aa13.09□□□□□ -0.31
CPSF7-202ENST00000394888 RHOFQ9HBH0 211 aa13.09□□□□□ -0.31
CPSF7-202ENST00000394888 LSM5Q9Y4Y9 91 aaKnown RBP13.09□□□□□ -0.31
CPSF7-202ENST00000394888 C3orf85A0A1B0GTC6 90 aa13.09□□□□□ -0.31
CPSF7-202ENST00000394888 NKX2-6A6NCS4 301 aa13.09□□□□□ -0.31
CPSF7-202ENST00000394888 PET100P0DJ07 73 aa13.09□□□□□ -0.31
CPSF7-202ENST00000394888 TBC1D26Q86UD7 250 aa13.09□□□□□ -0.31
CPSF7-202ENST00000394888 OR5A2Q8NGI9 324 aa13.09□□□□□ -0.31
CPSF7-202ENST00000394888 APH1AQ96BI3 265 aa13.09□□□□□ -0.31
CPSF7-202ENST00000394888 PARP11Q9NR21 331 aa13.09□□□□□ -0.31
CPSF7-202ENST00000394888 RNF115Q9Y4L5 304 aa13.09□□□□□ -0.31
CPSF7-202ENST00000394888 SUMF2Q8NBJ7 301 aa13.09□□□□□ -0.31
CPSF7-202ENST00000394888 TAAR3PQ9P1P4 343 aa13.09□□□□□ -0.31
CPSF7-202ENST00000394888 IGSF23A1L1A6 192 aa13.08□□□□□ -0.32
CPSF7-202ENST00000394888 TRDCB7Z8K6 153 aa13.08□□□□□ -0.32
CPSF7-202ENST00000394888 TNFSF15O95150 251 aa13.08□□□□□ -0.32
CPSF7-202ENST00000394888 CDS2O95674 445 aa13.08□□□□□ -0.32
CPSF7-202ENST00000394888 ATF4P18848 351 aaPredicted RBP13.08□□□□□ -0.32
CPSF7-202ENST00000394888 EPHA1P21709 976 aa13.08□□□□□ -0.32
CPSF7-202ENST00000394888 CCNOP22674 350 aa13.08□□□□□ -0.32
CPSF7-202ENST00000394888 PAX9P55771 341 aa13.08□□□□□ -0.32
CPSF7-202ENST00000394888 ALKBH6Q3KRA9 238 aa13.08□□□□□ -0.32
CPSF7-202ENST00000394888 MDP1Q86V88 176 aa13.08□□□□□ -0.32
CPSF7-202ENST00000394888 TSNAXQ99598 290 aaKnown RBP13.08□□□□□ -0.32
CPSF7-202ENST00000394888 SEC11CQ9BY50 192 aa13.08□□□□□ -0.32
CPSF7-202ENST00000394888 SMIM3Q9BZL3 60 aa13.08□□□□□ -0.32
CPSF7-202ENST00000394888 SOX8P57073 446 aa13.08□□□□□ -0.32
CPSF7-202ENST00000394888 DEFA5Q01523 94 aa13.08□□□□□ -0.32
CPSF7-202ENST00000394888 ZNF169Q14929 603 aaPredicted RBP13.08□□□□□ -0.32
CPSF7-202ENST00000394888 GLRX2Q9NS18 164 aa13.08□□□□□ -0.32
CPSF7-202ENST00000394888 POMT1Q9Y6A1 747 aa13.08□□□□□ -0.32
CPSF7-202ENST00000394888 ATP23Q9Y6H3 246 aa13.08□□□□□ -0.32
CPSF7-202ENST00000394888 CACNA1GO43497 2377 aa13.08□□□□□ -0.32
CPSF7-202ENST00000394888 A0A1W2PR80 420 aa13.08□□□□□ -0.32
CPSF7-202ENST00000394888 IGKV1-39P01597 117 aa13.08□□□□□ -0.32
CPSF7-202ENST00000394888 IGKV1D-39P04432 117 aa13.08□□□□□ -0.32
CPSF7-202ENST00000394888 DANCRP0C864 163 aa13.08□□□□□ -0.32
CPSF7-202ENST00000394888 ERVS71-1P61550 626 aa13.08□□□□□ -0.32
CPSF7-202ENST00000394888 PMP22Q01453 160 aa13.08□□□□□ -0.32
CPSF7-202ENST00000394888 MPV17LQ2QL34 196 aa13.08□□□□□ -0.32
CPSF7-202ENST00000394888 TMEM88Q6PEY1 159 aa13.08□□□□□ -0.32
CPSF7-202ENST00000394888 CLRN3Q8NCR9 226 aa13.08□□□□□ -0.32
CPSF7-202ENST00000394888 GTF3AQ92664 365 aaKnown RBP13.08□□□□□ -0.32
CPSF7-202ENST00000394888 ARL11Q969Q4 196 aa13.08□□□□□ -0.32
CPSF7-202ENST00000394888 PROB1E7EW31 1015 aa13.07□□□□□ -0.32
CPSF7-202ENST00000394888 PHF1O43189 567 aaPredicted RBP13.07□□□□□ -0.32
CPSF7-202ENST00000394888 NDUFA2O43678 99 aa13.07□□□□□ -0.32
CPSF7-202ENST00000394888 IL24Q13007 206 aa13.07□□□□□ -0.32
CPSF7-202ENST00000394888 SYT3Q9BQG1 590 aa13.07□□□□□ -0.32
CPSF7-202ENST00000394888 CABLES2Q9BTV7 478 aa13.07□□□□□ -0.32
CPSF7-202ENST00000394888 HRH4Q9H3N8 390 aa13.07□□□□□ -0.32
CPSF7-202ENST00000394888 C12orf49Q9H741 205 aa13.07□□□□□ -0.32
CPSF7-202ENST00000394888 NUDT19A8MXV4 375 aa13.07□□□□□ -0.32
CPSF7-202ENST00000394888 HSPB6O14558 160 aa13.07□□□□□ -0.32
CPSF7-202ENST00000394888 PITX3O75364 302 aa13.07□□□□□ -0.32
CPSF7-202ENST00000394888 ETV3LQ6ZN32 361 aa13.07□□□□□ -0.32
CPSF7-202ENST00000394888 PIP4P1Q86T03 277 aa13.07□□□□□ -0.32
CPSF7-202ENST00000394888 CLCF1Q9UBD9 225 aa13.07□□□□□ -0.32
CPSF7-202ENST00000394888 B4GALT7Q9UBV7 327 aa13.07□□□□□ -0.32
CPSF7-202ENST00000394888 PRR14LQ5THK1 2151 aa13.07□□□□□ -0.32
CPSF7-202ENST00000394888 CDRT15L2A8MXV6 281 aa13.07□□□□□ -0.32
CPSF7-202ENST00000394888 E5RGE8 158 aa13.07□□□□□ -0.32
CPSF7-202ENST00000394888 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.07□□□□□ -0.32
CPSF7-202ENST00000394888 C1QL1O75973 258 aa13.07□□□□□ -0.32
CPSF7-202ENST00000394888 NFYBP25208 207 aa13.07□□□□□ -0.32
CPSF7-202ENST00000394888 P2RY1P47900 373 aa13.07□□□□□ -0.32
CPSF7-202ENST00000394888 ZNF766Q5HY98 468 aa13.07□□□□□ -0.32
CPSF7-202ENST00000394888 VASH2Q86V25 355 aa13.07□□□□□ -0.32
CPSF7-202ENST00000394888 ZNF442Q9H7R0 627 aa13.07□□□□□ -0.32
CPSF7-202ENST00000394888 PLEKHA2Q9HB19 425 aa13.07□□□□□ -0.32
CPSF7-202ENST00000394888 NSG2Q9Y328 171 aa13.07□□□□□ -0.32
CPSF7-202ENST00000394888 DMXL2Q8TDJ6 3036 aa13.06□□□□□ -0.32
CPSF7-202ENST00000394888 FBXO24O75426 580 aa13.06□□□□□ -0.32
CPSF7-202ENST00000394888 WNT2P09544 360 aa13.06□□□□□ -0.32
CPSF7-202ENST00000394888 UCP1P25874 307 aa13.06□□□□□ -0.32
CPSF7-202ENST00000394888 DEFB127Q9H1M4 99 aa13.06□□□□□ -0.32
CPSF7-202ENST00000394888 KLF2Q9Y5W3 355 aaPredicted RBP13.06□□□□□ -0.32
CPSF7-202ENST00000394888 ATP6V1G2-DDX39BF2Z307 99 aa13.06□□□□□ -0.32
CPSF7-202ENST00000394888 GPR137BO60478 399 aa13.06□□□□□ -0.32
CPSF7-202ENST00000394888 MED6O75586 246 aa13.06□□□□□ -0.32
CPSF7-202ENST00000394888 ARR3P36575 388 aa13.06□□□□□ -0.32
CPSF7-202ENST00000394888 TESK1Q15569 626 aa13.06□□□□□ -0.32
CPSF7-202ENST00000394888 C5orf30Q96GV9 206 aa13.06□□□□□ -0.32
CPSF7-202ENST00000394888 PARP12Q9H0J9 701 aaKnown RBP13.06□□□□□ -0.32
CPSF7-202ENST00000394888 CCL28Q9NRJ3 127 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms