RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 SLC23A3Q6PIS1 610 aa9.12□□□□□ -0.95
COL4A6-203ENST00000394872 ZNF721Q8TF20 911 aa9.12□□□□□ -0.95
COL4A6-203ENST00000394872 Q8WTZ3 238 aa9.12□□□□□ -0.95
COL4A6-203ENST00000394872 VAMP8Q9BV40 100 aa9.12□□□□□ -0.95
COL4A6-203ENST00000394872 KIAA1324LA8MWY0 1029 aaPredicted RBP9.12□□□□□ -0.95
COL4A6-203ENST00000394872 SOCS1O15524 211 aa9.12□□□□□ -0.95
COL4A6-203ENST00000394872 OR5AL1P0C617 328 aa9.12□□□□□ -0.95
COL4A6-203ENST00000394872 RNF212Q495C1 297 aa9.12□□□□□ -0.95
COL4A6-203ENST00000394872 CDK2AP1O14519 115 aa9.12□□□□□ -0.95
COL4A6-203ENST00000394872 BGLAPP02818 100 aa9.12□□□□□ -0.95
COL4A6-203ENST00000394872 RPS4Y1P22090 263 aaKnown RBP9.12□□□□□ -0.95
COL4A6-203ENST00000394872 ZNF66Q6ZN08 573 aa9.12□□□□□ -0.95
COL4A6-203ENST00000394872 LSMEM1Q8N8F7 131 aa9.12□□□□□ -0.95
COL4A6-203ENST00000394872 DUSP18Q8NEJ0 188 aa9.12□□□□□ -0.95
COL4A6-203ENST00000394872 LOXL4Q96JB6 756 aa9.12□□□□□ -0.95
COL4A6-203ENST00000394872 LINC00052Q96N35 136 aa9.12□□□□□ -0.95
COL4A6-203ENST00000394872 SLIRPQ9GZT3 109 aaKnown RBP9.12□□□□□ -0.95
COL4A6-203ENST00000394872 OPN3Q9H1Y3 402 aaPredicted RBP9.12□□□□□ -0.95
COL4A6-203ENST00000394872 PARD6AQ9NPB6 346 aa9.12□□□□□ -0.95
COL4A6-203ENST00000394872 LPAR3Q9UBY5 353 aa9.12□□□□□ -0.95
COL4A6-203ENST00000394872 TRIP11Q15643 1979 aa9.12□□□□□ -0.95
COL4A6-203ENST00000394872 J3QT63 122 aa9.12□□□□□ -0.95
COL4A6-203ENST00000394872 GSTZ1O43708 216 aaPredicted RBP9.12□□□□□ -0.95
COL4A6-203ENST00000394872 PTBP3O95758 552 aaKnown RBP9.12□□□□□ -0.95
COL4A6-203ENST00000394872 INHBBP09529 407 aa9.12□□□□□ -0.95
COL4A6-203ENST00000394872 PAFAH1B2P68402 229 aa9.12□□□□□ -0.95
COL4A6-203ENST00000394872 HIST1H3AP68431 136 aa9.12□□□□□ -0.95
COL4A6-203ENST00000394872 ZNF596Q8TC21 504 aa9.12□□□□□ -0.95
COL4A6-203ENST00000394872 HARBI1Q96MB7 349 aa9.12□□□□□ -0.95
COL4A6-203ENST00000394872 PPIAL4EA0A075B759 164 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 A0A1W2PNV4 684 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 PPIAL4DF5H284 164 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 MOSPD3O75425 235 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 PPIAL4FP0DN26 164 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 PCMT1P22061 227 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 SLC6A1P30531 599 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 POLR2GP62487 172 aaKnown RBP eCLIP9.11□□□□□ -0.95
COL4A6-203ENST00000394872 GGTLC2Q14390 218 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 SLC7A10Q9NS82 523 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 PIPOXQ9P0Z9 390 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 ANXA10Q9UJ72 324 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 PPIAL4AQ9Y536 164 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 LAMB2P55268 1798 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 ANKRD20A5PA0PJZ0 165 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 OR2T8A6NH00 312 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 MPC2O95563 127 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 ADRA2AP08913 450 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 KRTCAP3Q53RY4 240 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 TSPO2Q5TGU0 170 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 TMEM37Q8WXS4 190 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 ZNF764Q96H86 408 aaPredicted RBP9.11□□□□□ -0.95
COL4A6-203ENST00000394872 WDFY2Q96P53 400 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 RABAC1Q9UI14 185 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 MMP24Q9Y5R2 645 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 CTSDP07339 412 aaPredicted RBP9.11□□□□□ -0.95
COL4A6-203ENST00000394872 KCNMB1Q16558 191 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 C21orf62-AS1Q17RA5 79 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 XAF1Q6GPH4 301 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 FAHD2BQ6P2I3 314 aaPredicted RBP9.11□□□□□ -0.95
COL4A6-203ENST00000394872 ZAR1Q86SH2 424 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 OR4C5Q8NGB2 326 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 FAHD2AQ96GK7 314 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 HNRNPA3P51991 378 aaKnown RBP9.11□□□□□ -0.95
COL4A6-203ENST00000394872 COL10A1Q03692 680 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 PIGYQ3MUY2 71 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 PRSS54Q6PEW0 395 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 GAPTQ8N292 157 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 OR4D11Q8NGI4 311 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 TECRQ9NZ01 308 aaKnown RBP9.11□□□□□ -0.95
COL4A6-203ENST00000394872 SMCHD1A6NHR9 2005 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 IGHV1-45A0A0A0MS14 117 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 AESQ08117 197 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 C5orf17Q8NAS9 161 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 OR5A2Q8NGI9 324 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 TMEM167BQ9NRX6 74 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 PRR13Q9NZ81 148 aa9.11□□□□□ -0.95
COL4A6-203ENST00000394872 C9orf172C9J069 976 aa9.1□□□□□ -0.95
COL4A6-203ENST00000394872 FCN1O00602 326 aa9.1□□□□□ -0.95
COL4A6-203ENST00000394872 NKX2-8O15522 239 aa9.1□□□□□ -0.95
COL4A6-203ENST00000394872 CSF2RBP32927 897 aa9.1□□□□□ -0.95
COL4A6-203ENST00000394872 FOXL2P58012 376 aa9.1□□□□□ -0.95
COL4A6-203ENST00000394872 HLA-DRB3P79483 266 aa9.1□□□□□ -0.95
COL4A6-203ENST00000394872 ADAMTS17Q8TE56 1095 aa9.1□□□□□ -0.95
COL4A6-203ENST00000394872 ADAMTSL1Q8N6G6 1762 aa9.1□□□□□ -0.95
COL4A6-203ENST00000394872 GFRA3O60609 400 aa9.1□□□□□ -0.95
COL4A6-203ENST00000394872 ORM1P02763 201 aa9.1□□□□□ -0.95
COL4A6-203ENST00000394872 IL24Q13007 206 aa9.1□□□□□ -0.95
COL4A6-203ENST00000394872 DOLPP1Q86YN1 238 aa9.1□□□□□ -0.95
COL4A6-203ENST00000394872 OR2J1Q9GZK6 312 aa9.1□□□□□ -0.95
COL4A6-203ENST00000394872 FBXL17Q9UF56 701 aa9.1□□□□□ -0.95
COL4A6-203ENST00000394872 LIPGQ9Y5X9 500 aa9.1□□□□□ -0.95
COL4A6-203ENST00000394872 NQO2P16083 231 aa9.1□□□□□ -0.95
COL4A6-203ENST00000394872 DMKNQ6E0U4 476 aaPredicted RBP9.1□□□□□ -0.95
COL4A6-203ENST00000394872 SSX8Q7RTT4 187 aa9.1□□□□□ -0.95
COL4A6-203ENST00000394872 ZNF501Q96CX3 271 aaPredicted RBP9.1□□□□□ -0.95
COL4A6-203ENST00000394872 LRRC3BQ96PB8 259 aa9.1□□□□□ -0.95
COL4A6-203ENST00000394872 PLXNB2O15031 1838 aa9.1□□□□□ -0.95
COL4A6-203ENST00000394872 FOXS1O43638 330 aa9.1□□□□□ -0.95
COL4A6-203ENST00000394872 MVDP53602 400 aa9.1□□□□□ -0.95
COL4A6-203ENST00000394872 CCDC144NLQ6NUI1 221 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms