RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 RGS7BPQ6MZT1 257 aaPredicted RBP12.8□□□□□ -0.36
GPC3-202ENST00000394299 Q6P435 159 aa12.8□□□□□ -0.36
GPC3-202ENST00000394299 OR1S1Q8NH92 325 aa12.8□□□□□ -0.36
GPC3-202ENST00000394299 SECTM1Q8WVN6 248 aa12.8□□□□□ -0.36
GPC3-202ENST00000394299 MSL2Q9HCI7 577 aa12.8□□□□□ -0.36
GPC3-202ENST00000394299 OBP2BQ9NPH6 170 aa12.8□□□□□ -0.36
GPC3-202ENST00000394299 DEGS1O15121 323 aa12.79□□□□□ -0.36
GPC3-202ENST00000394299 GNRHRP30968 328 aa12.79□□□□□ -0.36
GPC3-202ENST00000394299 HERV-K104P61576 105 aa12.79□□□□□ -0.36
GPC3-202ENST00000394299 LHFPL5Q8TAF8 219 aa12.79□□□□□ -0.36
GPC3-202ENST00000394299 GLYATL2Q8WU03 294 aa12.79□□□□□ -0.36
GPC3-202ENST00000394299 TP53RKQ96S44 253 aa12.79□□□□□ -0.36
GPC3-202ENST00000394299 PKIBQ9C010 78 aa12.79□□□□□ -0.36
GPC3-202ENST00000394299 IGHV1-18A0A0C4DH31 117 aa12.79□□□□□ -0.36
GPC3-202ENST00000394299 IQCF6A8MYZ5 107 aa12.79□□□□□ -0.36
GPC3-202ENST00000394299 WNT9BO14905 357 aa12.79□□□□□ -0.36
GPC3-202ENST00000394299 CNOT4O95628 575 aaKnown RBP12.79□□□□□ -0.36
GPC3-202ENST00000394299 EIF2S3P41091 472 aaKnown RBP12.79□□□□□ -0.36
GPC3-202ENST00000394299 P2RX3P56373 397 aa12.79□□□□□ -0.36
GPC3-202ENST00000394299 OR8G1Q15617 311 aa12.79□□□□□ -0.36
GPC3-202ENST00000394299 AANATQ16613 207 aa12.79□□□□□ -0.36
GPC3-202ENST00000394299 ZNF474Q6S9Z5 364 aaPredicted RBP12.79□□□□□ -0.36
GPC3-202ENST00000394299 LDLRAD3Q86YD5 345 aa12.79□□□□□ -0.36
GPC3-202ENST00000394299 RASL12Q9NYN1 266 aa12.79□□□□□ -0.36
GPC3-202ENST00000394299 TRBV6-7A0A0A0MS04 114 aa12.78□□□□□ -0.36
GPC3-202ENST00000394299 MBD3L4A6NDZ8 208 aaPredicted RBP12.78□□□□□ -0.36
GPC3-202ENST00000394299 MBD3L3A6NE82 208 aaPredicted RBP12.78□□□□□ -0.36
GPC3-202ENST00000394299 MBD3L5A6NJ08 208 aaPredicted RBP12.78□□□□□ -0.36
GPC3-202ENST00000394299 PHF1O43189 567 aaPredicted RBP12.78□□□□□ -0.36
GPC3-202ENST00000394299 CRYZL1O95825 349 aa12.78□□□□□ -0.36
GPC3-202ENST00000394299 Q6ZR03 302 aa12.78□□□□□ -0.36
GPC3-202ENST00000394299 BHLHA15Q7RTS1 189 aaPredicted RBP12.78□□□□□ -0.36
GPC3-202ENST00000394299 PRR18Q8N4B5 295 aa12.78□□□□□ -0.36
GPC3-202ENST00000394299 MBD3L2Q8NHZ7 208 aaPredicted RBP12.78□□□□□ -0.36
GPC3-202ENST00000394299 PLPPR1Q8TBJ4 325 aa12.78□□□□□ -0.36
GPC3-202ENST00000394299 PIK3IP1Q96FE7 263 aa12.78□□□□□ -0.36
GPC3-202ENST00000394299 ABHD17AQ96GS6 310 aa12.78□□□□□ -0.36
GPC3-202ENST00000394299 REG4Q9BYZ8 158 aa12.78□□□□□ -0.36
GPC3-202ENST00000394299 KIF25Q9UIL4 384 aa12.78□□□□□ -0.36
GPC3-202ENST00000394299 KCNIP3Q9Y2W7 256 aa12.78□□□□□ -0.36
GPC3-202ENST00000394299 LRP5LA4QPB2 252 aa12.78□□□□□ -0.36
GPC3-202ENST00000394299 TRDCB7Z8K6 153 aa12.78□□□□□ -0.36
GPC3-202ENST00000394299 SLC34A2O95436 690 aa12.78□□□□□ -0.36
GPC3-202ENST00000394299 OR2H2O95918 312 aa12.78□□□□□ -0.36
GPC3-202ENST00000394299 SCGB1D2O95969 90 aa12.78□□□□□ -0.36
GPC3-202ENST00000394299 SPIN3Q5JUX0 258 aa12.78□□□□□ -0.36
GPC3-202ENST00000394299 PRAMEF6Q5VXH4 476 aa12.78□□□□□ -0.36
GPC3-202ENST00000394299 PRSS54Q6PEW0 395 aa12.78□□□□□ -0.36
GPC3-202ENST00000394299 MEX3BQ6ZN04 569 aaKnown RBP12.78□□□□□ -0.36
GPC3-202ENST00000394299 ZNF818PQ6ZRF7 136 aa12.78□□□□□ -0.36
GPC3-202ENST00000394299 SUN5Q8TC36 379 aa12.78□□□□□ -0.36
GPC3-202ENST00000394299 DHRS9Q9BPW9 319 aa12.78□□□□□ -0.36
GPC3-202ENST00000394299 RSRP1Q9BUV0 290 aa12.78□□□□□ -0.36
GPC3-202ENST00000394299 UFSP2Q9NUQ7 469 aa12.78□□□□□ -0.36
GPC3-202ENST00000394299 OR14J1Q9UGF5 321 aa12.78□□□□□ -0.36
GPC3-202ENST00000394299 PURGQ9UJV8 347 aaKnown RBP12.78□□□□□ -0.36
GPC3-202ENST00000394299 KIAA2026Q5HYC2 2103 aa12.77□□□□□ -0.36
GPC3-202ENST00000394299 ADGRG4Q8IZF6 3080 aa12.77□□□□□ -0.36
GPC3-202ENST00000394299 HSD17B6O14756 317 aa12.77□□□□□ -0.36
GPC3-202ENST00000394299 NXPH2O95156 264 aa12.77□□□□□ -0.36
GPC3-202ENST00000394299 ERVK11-1P61568 191 aa12.77□□□□□ -0.36
GPC3-202ENST00000394299 MSMPQ1L6U9 139 aa12.77□□□□□ -0.36
GPC3-202ENST00000394299 PCSK4Q6UW60 755 aa12.77□□□□□ -0.36
GPC3-202ENST00000394299 CLEC9AQ6UXN8 241 aa12.77□□□□□ -0.36
GPC3-202ENST00000394299 C22orf34Q6ZV56 151 aa12.77□□□□□ -0.36
GPC3-202ENST00000394299 C11orf53Q8IXP5 236 aa12.77□□□□□ -0.36
GPC3-202ENST00000394299 SLC38A6Q8IZM9 456 aa12.77□□□□□ -0.36
GPC3-202ENST00000394299 GALNT11Q8NCW6 608 aa12.77□□□□□ -0.36
GPC3-202ENST00000394299 MSI2Q96DH6 328 aaKnown RBP12.77□□□□□ -0.36
GPC3-202ENST00000394299 POM121Q96HA1 1249 aa12.77□□□□□ -0.36
GPC3-202ENST00000394299 PRRX2Q99811 253 aa12.77□□□□□ -0.36
GPC3-202ENST00000394299 PLK3Q9H4B4 646 aa12.77□□□□□ -0.36
GPC3-202ENST00000394299 CCL28Q9NRJ3 127 aa12.77□□□□□ -0.36
GPC3-202ENST00000394299 TMEM100Q9NV29 134 aa12.77□□□□□ -0.36
GPC3-202ENST00000394299 LSM5Q9Y4Y9 91 aaKnown RBP12.77□□□□□ -0.36
GPC3-202ENST00000394299 ATP23Q9Y6H3 246 aa12.77□□□□□ -0.36
GPC3-202ENST00000394299 ICE1Q9Y2F5 2266 aa12.77□□□□□ -0.37
GPC3-202ENST00000394299 IGHV2OR16-5A0A0B4J2B6 119 aa12.77□□□□□ -0.37
GPC3-202ENST00000394299 J3QW42 95 aa12.77□□□□□ -0.37
GPC3-202ENST00000394299 LGALS8O00214 317 aa12.77□□□□□ -0.37
GPC3-202ENST00000394299 TNFSF12O43508 249 aa12.77□□□□□ -0.37
GPC3-202ENST00000394299 TK1P04183 234 aa12.77□□□□□ -0.37
GPC3-202ENST00000394299 ZNF83P51522 516 aa12.77□□□□□ -0.37
GPC3-202ENST00000394299 UBA52P62987 128 aaKnown RBP12.77□□□□□ -0.37
GPC3-202ENST00000394299 GAPTQ8N292 157 aa12.77□□□□□ -0.37
GPC3-202ENST00000394299 IL1F10Q8WWZ1 152 aa12.77□□□□□ -0.37
GPC3-202ENST00000394299 GTF3AQ92664 365 aaKnown RBP12.77□□□□□ -0.37
GPC3-202ENST00000394299 CYTL1Q9NRR1 136 aa12.77□□□□□ -0.37
GPC3-202ENST00000394299 OR5H1A6NKK0 313 aa12.76□□□□□ -0.37
GPC3-202ENST00000394299 SLC33A1O00400 549 aaPredicted RBP12.76□□□□□ -0.37
GPC3-202ENST00000394299 DIRAS3O95661 229 aa12.76□□□□□ -0.37
GPC3-202ENST00000394299 PGA5P0DJD9 388 aa12.76□□□□□ -0.37
GPC3-202ENST00000394299 HOXB1P14653 301 aaPredicted RBP12.76□□□□□ -0.37
GPC3-202ENST00000394299 KCNJ3P48549 501 aa12.76□□□□□ -0.37
GPC3-202ENST00000394299 UCP3P55916 312 aa12.76□□□□□ -0.37
GPC3-202ENST00000394299 IL13RA2Q14627 380 aa12.76□□□□□ -0.37
GPC3-202ENST00000394299 PAN3Q58A45 887 aaKnown RBP12.76□□□□□ -0.37
GPC3-202ENST00000394299 LRP11Q86VZ4 500 aa12.76□□□□□ -0.37
GPC3-202ENST00000394299 BOLLQ8N9W6 283 aaKnown RBP12.76□□□□□ -0.37
GPC3-202ENST00000394299 C1orf162Q8NEQ5 155 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms