RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 KREMEN2Q8NCW0 462 aa2.9□□□□□ -1.95
PHF3-202ENST00000393387 FAM222BQ8WU58 562 aa2.9□□□□□ -1.95
PHF3-202ENST00000393387 BRK1Q8WUW1 75 aa2.9□□□□□ -1.95
PHF3-202ENST00000393387 ATOH1Q92858 354 aaPredicted RBP2.9□□□□□ -1.95
PHF3-202ENST00000393387 NRIP2Q9BQI9 281 aa2.9□□□□□ -1.95
PHF3-202ENST00000393387 RNF208Q9H0X6 261 aa2.9□□□□□ -1.95
PHF3-202ENST00000393387 RBPJLQ9UBG7 517 aa2.9□□□□□ -1.95
PHF3-202ENST00000393387 MOKQ9UQ07 419 aa2.9□□□□□ -1.95
PHF3-202ENST00000393387 PTRH2Q9Y3E5 179 aaKnown RBP2.9□□□□□ -1.95
PHF3-202ENST00000393387 PTPRUQ92729 1446 aa2.9□□□□□ -1.95
PHF3-202ENST00000393387 IGHV3-20A0A0C4DH32 117 aa2.9□□□□□ -1.95
PHF3-202ENST00000393387 K7ESF4 209 aa2.9□□□□□ -1.95
PHF3-202ENST00000393387 ACOT8O14734 319 aa2.9□□□□□ -1.95
PHF3-202ENST00000393387 TIMP1P01033 207 aa2.9□□□□□ -1.95
PHF3-202ENST00000393387 TRACP01848 142 aa2.9□□□□□ -1.95
PHF3-202ENST00000393387 CD5P06127 495 aa2.9□□□□□ -1.95
PHF3-202ENST00000393387 LIPFP07098 398 aa2.9□□□□□ -1.95
PHF3-202ENST00000393387 GZMBP10144 247 aa2.9□□□□□ -1.95
PHF3-202ENST00000393387 ZNF30P17039 623 aa2.9□□□□□ -1.95
PHF3-202ENST00000393387 EVI2AP22794 236 aa2.9□□□□□ -1.95
PHF3-202ENST00000393387 OR3A4PP47883 348 aa2.9□□□□□ -1.95
PHF3-202ENST00000393387 HOXA4Q00056 320 aaPredicted RBP2.9□□□□□ -1.95
PHF3-202ENST00000393387 EWSR1Q01844 656 aaKnown RBP eCLIP2.9□□□□□ -1.95
PHF3-202ENST00000393387 COL10A1Q03692 680 aa2.9□□□□□ -1.95
PHF3-202ENST00000393387 TNXAQ16473 311 aa2.9□□□□□ -1.95
PHF3-202ENST00000393387 KLF17Q5JT82 389 aaPredicted RBP2.9□□□□□ -1.95
PHF3-202ENST00000393387 DCAF10Q5QP82 559 aa2.9□□□□□ -1.95
PHF3-202ENST00000393387 SAMD5Q5TGI4 173 aa2.9□□□□□ -1.95
PHF3-202ENST00000393387 MBNL2Q5VZF2 373 aaKnown RBP2.9□□□□□ -1.95
PHF3-202ENST00000393387 PQLC2Q6ZP29 291 aa2.9□□□□□ -1.95
PHF3-202ENST00000393387 DNM1P46Q6ZS02 220 aa2.9□□□□□ -1.95
PHF3-202ENST00000393387 RFESDQ8TAC1 157 aa2.9□□□□□ -1.95
PHF3-202ENST00000393387 MRPL24Q96A35 216 aaKnown RBP2.9□□□□□ -1.95
PHF3-202ENST00000393387 WDR13Q9H1Z4 485 aa2.9□□□□□ -1.95
PHF3-202ENST00000393387 PRDM13Q9H4Q3 707 aa2.9□□□□□ -1.95
PHF3-202ENST00000393387 TMEM106BQ9NUM4 274 aa2.9□□□□□ -1.95
PHF3-202ENST00000393387 ASPDHA6ND91 283 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 GAGE12JA6NER3 117 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 RER1O15258 196 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 CHST1O43916 411 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 ETHE1O95571 254 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 TBX6O95947 436 aaPredicted RBP2.89□□□□□ -1.95
PHF3-202ENST00000393387 GAGE1Q13065 139 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 GAGE4Q13068 117 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 GAGE5Q13069 117 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 GAGE6Q13070 117 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 GAGE13Q4V321 117 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 ZNF766Q5HY98 468 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 IBA57Q5T440 356 aaKnown RBP2.89□□□□□ -1.95
PHF3-202ENST00000393387 C10orf113Q5VZT2 155 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 TCF23Q7RTU1 214 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 PHLDA1Q8WV24 401 aaPredicted RBP2.89□□□□□ -1.95
PHF3-202ENST00000393387 CSF3RQ99062 836 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 TXNDC17Q9BRA2 123 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 NRSN2Q9GZP1 204 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 SMOC2Q9H3U7 446 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 COA4Q9NYJ1 87 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 TOMM7Q9P0U1 55 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 ANXA10Q9UJ72 324 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 ZNF346Q9UL40 294 aaKnown RBP2.89□□□□□ -1.95
PHF3-202ENST00000393387 PKIGQ9Y2B9 76 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 ZNF257Q9Y2Q1 563 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 LRRC7Q96NW7 1537 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 A0A1W2PRS3 328 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 B5MCH6 92 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 DLEU1O43261 78 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 EGR1P18146 543 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 NUTF2P61970 127 aaKnown RBP2.89□□□□□ -1.95
PHF3-202ENST00000393387 MRPS11P82912 194 aaKnown RBP2.89□□□□□ -1.95
PHF3-202ENST00000393387 HIKESHIQ53FT3 197 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 ABHD17BQ5VST6 288 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 DLEU7Q6UYE1 221 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 DPY19L2P2Q6ZN68 376 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 SLC25A26Q70HW3 274 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 CAMKMTQ7Z624 323 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 OR1L1Q8NH94 360 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 SLC37A2Q8TED4 501 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 PELI1Q96FA3 418 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 SLC35A4Q96G79 324 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 RCC1LQ96I51 464 aaKnown RBP2.89□□□□□ -1.95
PHF3-202ENST00000393387 TMEM56Q96MV1 263 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 FAM198AQ9UFP1 575 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 TCFL5Q9UL49 500 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 SPATA31A1Q5TZJ5 1347 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 DLC1Q96QB1 1528 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 TRAV38-1A0A0B4J264 116 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 M0R082 166 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 FOXE1O00358 373 aaPredicted RBP2.89□□□□□ -1.95
PHF3-202ENST00000393387 DUX1O43812 170 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 FOLR3P41439 243 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 SUMO2P61956 95 aaKnown RBP2.89□□□□□ -1.95
PHF3-202ENST00000393387 INSM1Q01101 510 aaPredicted RBP2.89□□□□□ -1.95
PHF3-202ENST00000393387 HYAL1Q12794 435 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 FZD5Q13467 585 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 CEACAM16Q2WEN9 425 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 PABPC1L2AQ5JQF8 200 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 TTC9CQ8N5M4 171 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 OR4X1Q8NH49 305 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 SMIM4Q8WVI0 70 aa2.89□□□□□ -1.95
PHF3-202ENST00000393387 ASB5Q8WWX0 329 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms