RNA–Protein interactions for RNA: ENST00000393211.3

COL17A1-203, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL17A1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-203ENST00000393211 AKR1C8PQ5T2L2 129 aa8.61□□□□□ -1.03
COL17A1-203ENST00000393211 Q6ZPA2 131 aa8.61□□□□□ -1.03
COL17A1-203ENST00000393211 COLCA1Q6ZS62 124 aa8.61□□□□□ -1.03
COL17A1-203ENST00000393211 LINC00596Q86U02 117 aa8.61□□□□□ -1.03
COL17A1-203ENST00000393211 ZNF429Q86V71 674 aa8.61□□□□□ -1.03
COL17A1-203ENST00000393211 RPS19BP1Q86WX3 136 aaKnown RBP8.61□□□□□ -1.03
COL17A1-203ENST00000393211 CMTM1Q8IZ96 169 aa8.61□□□□□ -1.03
COL17A1-203ENST00000393211 ZNF611Q8N823 705 aa8.61□□□□□ -1.03
COL17A1-203ENST00000393211 OR5C1Q8NGR4 320 aa8.61□□□□□ -1.03
COL17A1-203ENST00000393211 AKR7LQ8NHP1 331 aa8.61□□□□□ -1.03
COL17A1-203ENST00000393211 PIGCQ92535 297 aa8.61□□□□□ -1.03
COL17A1-203ENST00000393211 DYRK2Q92630 601 aa8.61□□□□□ -1.03
COL17A1-203ENST00000393211 EXTL1Q92935 676 aa8.61□□□□□ -1.03
COL17A1-203ENST00000393211 RAB39BQ96DA2 213 aa8.61□□□□□ -1.03
COL17A1-203ENST00000393211 SIGLEC12Q96PQ1 595 aa8.61□□□□□ -1.03
COL17A1-203ENST00000393211 ATP5SQ99766 215 aa8.61□□□□□ -1.03
COL17A1-203ENST00000393211 NIPSNAP3BQ9BS92 247 aa8.61□□□□□ -1.03
COL17A1-203ENST00000393211 SLC7A10Q9NS82 523 aa8.61□□□□□ -1.03
COL17A1-203ENST00000393211 TMEM242Q9NWH2 141 aa8.61□□□□□ -1.03
COL17A1-203ENST00000393211 RNF150Q9ULK6 438 aa8.61□□□□□ -1.03
COL17A1-203ENST00000393211 ELOA3CA0A087WX78 387 aaPredicted RBP8.6□□□□□ -1.03
COL17A1-203ENST00000393211 TRBV6-6A0A0A6YYG2 114 aa8.6□□□□□ -1.03
COL17A1-203ENST00000393211 FAM221AA4D161 298 aa8.6□□□□□ -1.03
COL17A1-203ENST00000393211 C9J4A7 227 aa8.6□□□□□ -1.03
COL17A1-203ENST00000393211 TXNL1O43396 289 aa8.6□□□□□ -1.03
COL17A1-203ENST00000393211 SSSCA1O60232 199 aa8.6□□□□□ -1.03
COL17A1-203ENST00000393211 IGHEP01854 428 aa8.6□□□□□ -1.03
COL17A1-203ENST00000393211 UMODP07911 640 aa8.6□□□□□ -1.03
COL17A1-203ENST00000393211 RPS10P46783 165 aaKnown RBP8.6□□□□□ -1.03
COL17A1-203ENST00000393211 GLIPR1P48060 266 aa8.6□□□□□ -1.03
COL17A1-203ENST00000393211 NPBWR2P48146 333 aa8.6□□□□□ -1.03
COL17A1-203ENST00000393211 FGF12P61328 243 aa8.6□□□□□ -1.03
COL17A1-203ENST00000393211 CCL20P78556 96 aa8.6□□□□□ -1.03
COL17A1-203ENST00000393211 PNRC1Q12796 327 aaPredicted RBP8.6□□□□□ -1.03
COL17A1-203ENST00000393211 TGIF1Q15583 401 aa8.6□□□□□ -1.03
COL17A1-203ENST00000393211 BRICD5Q6PL45 260 aa8.6□□□□□ -1.03
COL17A1-203ENST00000393211 ZFP62Q8NB50 900 aaPredicted RBP8.6□□□□□ -1.03
COL17A1-203ENST00000393211 AGBL5Q8NDL9 886 aa8.6□□□□□ -1.03
COL17A1-203ENST00000393211 CLDND2Q8NHS1 167 aa8.6□□□□□ -1.03
COL17A1-203ENST00000393211 CPNE4Q96A23 557 aaPredicted RBP8.6□□□□□ -1.03
COL17A1-203ENST00000393211 TMEM45BQ96B21 275 aa8.6□□□□□ -1.03
COL17A1-203ENST00000393211 PLK3Q9H4B4 646 aa8.6□□□□□ -1.03
COL17A1-203ENST00000393211 ZNF576Q9H609 170 aa8.6□□□□□ -1.03
COL17A1-203ENST00000393211 OPA3Q9H6K4 179 aa8.6□□□□□ -1.03
COL17A1-203ENST00000393211 GPR35Q9HC97 309 aa8.6□□□□□ -1.03
COL17A1-203ENST00000393211 WSB1Q9Y6I7 421 aa8.6□□□□□ -1.03
COL17A1-203ENST00000393211 TNRC18O15417 2968 aaPredicted RBP8.6□□□□□ -1.03
COL17A1-203ENST00000393211 A0A1B0GU03 582 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 SLC22A20A6NK97 555 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 SEC14L6B5MCN3 397 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 GPR37O15354 613 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 ADAM20O43506 726 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 ZNF205O95201 554 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 IFNA5P01569 189 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 MMP7P09237 267 aaPredicted RBP8.59□□□□□ -1.03
COL17A1-203ENST00000393211 COX5BP10606 129 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 B4GALT1P15291 398 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 S100A2P29034 98 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 DYNLT3P51808 116 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 RPL23AP62750 156 aaKnown RBP8.59□□□□□ -1.03
COL17A1-203ENST00000393211 DLK1P80370 383 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 TRA2AQ13595 282 aaKnown RBP eCLIP8.59□□□□□ -1.03
COL17A1-203ENST00000393211 DAZAP2Q15038 168 aaPredicted RBP8.59□□□□□ -1.03
COL17A1-203ENST00000393211 ELOBQ15370 118 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 CEACAM16Q2WEN9 425 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 IGSF11Q5DX21 431 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 SPIN3Q5JUX0 258 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 FAM209BQ5JX69 171 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 ZNF818PQ6ZRF7 136 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 SLC25A26Q70HW3 274 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 GGNQ86UU5 652 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 STX12Q86Y82 276 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 MKXQ8IYA7 352 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 H1FOOQ8IZA3 346 aaPredicted RBP8.59□□□□□ -1.03
COL17A1-203ENST00000393211 ZNF610Q8N9Z0 462 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 OR2Y1Q8NGV0 311 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 OR2V1Q8NHB1 315 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 PLPPR1Q8TBJ4 325 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 SAP25Q8TEE9 199 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 TMEM171Q8WVE6 324 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 ADGRG7Q96K78 797 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 JSRP1Q96MG2 331 aaPredicted RBP8.59□□□□□ -1.03
COL17A1-203ENST00000393211 RAB40CQ96S21 281 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 GGACTQ9BVM4 153 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 GLRX2Q9NS18 164 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 OCIAD1Q9NX40 245 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 GAR1Q9NY12 217 aaKnown RBP8.59□□□□□ -1.03
COL17A1-203ENST00000393211 TINAGQ9UJW2 476 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 HS3ST3B1Q9Y662 390 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 ATP23Q9Y6H3 246 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 EML6Q6ZMW3 1958 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 ABCA7Q8IZY2 2146 aa8.59□□□□□ -1.03
COL17A1-203ENST00000393211 TNRC6BQ9UPQ9 1833 aaKnown RBP8.58□□□□□ -1.04
COL17A1-203ENST00000393211 LOC102723971A0A1B0GUV8 181 aa8.58□□□□□ -1.04
COL17A1-203ENST00000393211 ZNF729A6NN14 1252 aaPredicted RBP8.58□□□□□ -1.04
COL17A1-203ENST00000393211 YKT6O15498 198 aa8.58□□□□□ -1.04
COL17A1-203ENST00000393211 CYTIPO60759 359 aa8.58□□□□□ -1.04
COL17A1-203ENST00000393211 KLF7O75840 302 aaPredicted RBP8.58□□□□□ -1.04
COL17A1-203ENST00000393211 P04436 131 aa8.58□□□□□ -1.04
COL17A1-203ENST00000393211 CELA2AP08217 269 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms