RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 FAM219AQ8IW50 185 aa12.69□□□□□ -0.38
MKS1-202ENST00000393119 OR8G5Q8NG78 346 aa12.69□□□□□ -0.38
MKS1-202ENST00000393119 UBALD1Q8TB05 177 aa12.69□□□□□ -0.38
MKS1-202ENST00000393119 CASTOR1Q8WTX7 329 aa12.69□□□□□ -0.38
MKS1-202ENST00000393119 ZCCHC14Q8WYQ9 949 aaKnown RBP12.69□□□□□ -0.38
MKS1-202ENST00000393119 MUCL1Q96DR8 90 aa12.69□□□□□ -0.38
MKS1-202ENST00000393119 LRRC46Q96FV0 321 aa12.69□□□□□ -0.38
MKS1-202ENST00000393119 PRRT1Q99946 306 aa12.69□□□□□ -0.38
MKS1-202ENST00000393119 C5orf66Q9H5L9 145 aa12.69□□□□□ -0.38
MKS1-202ENST00000393119 HSF4Q9ULV5 492 aa12.69□□□□□ -0.38
MKS1-202ENST00000393119 AMDHD2Q9Y303 409 aa12.69□□□□□ -0.38
MKS1-202ENST00000393119 POLEQ07864 2286 aa12.69□□□□□ -0.38
MKS1-202ENST00000393119 TRAV24A0A0B4J272 114 aa12.69□□□□□ -0.38
MKS1-202ENST00000393119 RLN2P04090 185 aa12.69□□□□□ -0.38
MKS1-202ENST00000393119 IGSF11Q5DX21 431 aa12.69□□□□□ -0.38
MKS1-202ENST00000393119 FAM58AQ8N1B3 248 aa12.69□□□□□ -0.38
MKS1-202ENST00000393119 Q8NFD4 153 aa12.69□□□□□ -0.38
MKS1-202ENST00000393119 TERB2Q8NHR7 220 aa12.69□□□□□ -0.38
MKS1-202ENST00000393119 SLC25A21Q9BQT8 299 aaPredicted RBP12.69□□□□□ -0.38
MKS1-202ENST00000393119 RTL8AQ9BWD3 113 aa12.69□□□□□ -0.38
MKS1-202ENST00000393119 SAV1Q9H4B6 383 aaPredicted RBP12.69□□□□□ -0.38
MKS1-202ENST00000393119 SLC2A8Q9NY64 477 aa12.69□□□□□ -0.38
MKS1-202ENST00000393119 RASL12Q9NYN1 266 aa12.69□□□□□ -0.38
MKS1-202ENST00000393119 NDRG3Q9UGV2 375 aa12.69□□□□□ -0.38
MKS1-202ENST00000393119 ZNF107Q9UII5 783 aaPredicted RBP12.69□□□□□ -0.38
MKS1-202ENST00000393119 LRBAP50851 2863 aa12.68□□□□□ -0.38
MKS1-202ENST00000393119 MED19A0JLT2 244 aaPredicted RBP12.68□□□□□ -0.38
MKS1-202ENST00000393119 OR5B21A6NL26 309 aa12.68□□□□□ -0.38
MKS1-202ENST00000393119 SIRPB1O00241 398 aa12.68□□□□□ -0.38
MKS1-202ENST00000393119 UCNP55089 124 aa12.68□□□□□ -0.38
MKS1-202ENST00000393119 FAM189A2Q15884 450 aa12.68□□□□□ -0.38
MKS1-202ENST00000393119 FAM76BQ5HYJ3 339 aa12.68□□□□□ -0.38
MKS1-202ENST00000393119 ELP2Q6IA86 826 aa12.68□□□□□ -0.38
MKS1-202ENST00000393119 NEK7Q8TDX7 302 aa12.68□□□□□ -0.38
MKS1-202ENST00000393119 TMEM230Q96A57 120 aa12.68□□□□□ -0.38
MKS1-202ENST00000393119 ZNF2Q9BSG1 426 aaPredicted RBP12.68□□□□□ -0.38
MKS1-202ENST00000393119 TREM2Q9NZC2 230 aa12.68□□□□□ -0.38
MKS1-202ENST00000393119 ANXA10Q9UJ72 324 aa12.68□□□□□ -0.38
MKS1-202ENST00000393119 HLA-AP01891 365 aaKnown RBP12.67□□□□□ -0.38
MKS1-202ENST00000393119 THBDP07204 575 aa12.67□□□□□ -0.38
MKS1-202ENST00000393119 VAMP1P23763 118 aa12.67□□□□□ -0.38
MKS1-202ENST00000393119 GRNP28799 593 aaKnown RBP12.67□□□□□ -0.38
MKS1-202ENST00000393119 GCH1P30793 250 aa12.67□□□□□ -0.38
MKS1-202ENST00000393119 IL24Q13007 206 aa12.67□□□□□ -0.38
MKS1-202ENST00000393119 VAX1Q5SQQ9 334 aa12.67□□□□□ -0.38
MKS1-202ENST00000393119 TMEM200AQ86VY9 491 aa12.67□□□□□ -0.38
MKS1-202ENST00000393119 SUMF2Q8NBJ7 301 aa12.67□□□□□ -0.38
MKS1-202ENST00000393119 OR2Z1Q8NG97 314 aa12.67□□□□□ -0.38
MKS1-202ENST00000393119 ASB13Q8WXK3 278 aa12.67□□□□□ -0.38
MKS1-202ENST00000393119 RTBDNQ9BSG5 229 aaPredicted RBP12.67□□□□□ -0.38
MKS1-202ENST00000393119 NKX6-2Q9C056 277 aaPredicted RBP12.67□□□□□ -0.38
MKS1-202ENST00000393119 ESRP2Q9H6T0 727 aaKnown RBP12.67□□□□□ -0.38
MKS1-202ENST00000393119 RALYQ9UKM9 306 aaKnown RBP12.67□□□□□ -0.38
MKS1-202ENST00000393119 PKD1L2Q7Z442 2459 aa12.67□□□□□ -0.38
MKS1-202ENST00000393119 J3QT63 122 aa12.67□□□□□ -0.38
MKS1-202ENST00000393119 MPZP25189 248 aa12.67□□□□□ -0.38
MKS1-202ENST00000393119 ZNF718Q3SXZ3 478 aa12.67□□□□□ -0.38
MKS1-202ENST00000393119 CHMP1AQ9HD42 196 aaPredicted RBP12.67□□□□□ -0.38
MKS1-202ENST00000393119 OR14J1Q9UGF5 321 aa12.67□□□□□ -0.38
MKS1-202ENST00000393119 OSGIN2Q9Y236 505 aa12.67□□□□□ -0.38
MKS1-202ENST00000393119 PLCE1Q9P212 2302 aa12.67□□□□□ -0.38
MKS1-202ENST00000393119 A6NLC8 198 aa12.66□□□□□ -0.38
MKS1-202ENST00000393119 SIGLEC5O15389 551 aa12.66□□□□□ -0.38
MKS1-202ENST00000393119 SCTP09683 121 aa12.66□□□□□ -0.38
MKS1-202ENST00000393119 ZNF44P15621 663 aa12.66□□□□□ -0.38
MKS1-202ENST00000393119 RCC1P18754 421 aaPredicted RBP12.66□□□□□ -0.38
MKS1-202ENST00000393119 SLC25A42Q86VD7 318 aa12.66□□□□□ -0.38
MKS1-202ENST00000393119 ZCCHC24Q8N2G6 241 aaKnown RBP12.66□□□□□ -0.38
MKS1-202ENST00000393119 OR2AK2Q8NG84 335 aa12.66□□□□□ -0.38
MKS1-202ENST00000393119 CCDC107Q8WV48 283 aa12.66□□□□□ -0.38
MKS1-202ENST00000393119 GPHA2Q96T91 129 aa12.66□□□□□ -0.38
MKS1-202ENST00000393119 BCL2L14Q9BZR8 327 aa12.66□□□□□ -0.38
MKS1-202ENST00000393119 SHANK1Q9Y566 2161 aa12.66□□□□□ -0.38
MKS1-202ENST00000393119 LRP5LA4QPB2 252 aa12.66□□□□□ -0.38
MKS1-202ENST00000393119 J3QW42 95 aa12.66□□□□□ -0.38
MKS1-202ENST00000393119 KNG1P01042 644 aa12.66□□□□□ -0.38
MKS1-202ENST00000393119 CRYAAP02489 173 aa12.66□□□□□ -0.38
MKS1-202ENST00000393119 OR5H8P0DN80 308 aa12.66□□□□□ -0.38
MKS1-202ENST00000393119 ZBTB25P24278 435 aa12.66□□□□□ -0.38
MKS1-202ENST00000393119 FXYD4P59646 89 aa12.66□□□□□ -0.38
MKS1-202ENST00000393119 SLC9A3R2Q15599 337 aa12.66□□□□□ -0.38
MKS1-202ENST00000393119 LHFPL1Q86WI0 220 aa12.66□□□□□ -0.38
MKS1-202ENST00000393119 TGIF2LYQ8IUE0 185 aa12.66□□□□□ -0.38
MKS1-202ENST00000393119 SAXO1Q8IYX7 474 aa12.66□□□□□ -0.38
MKS1-202ENST00000393119 TOMM40LQ969M1 308 aa12.66□□□□□ -0.38
MKS1-202ENST00000393119 SEC22AQ96IW7 307 aa12.66□□□□□ -0.38
MKS1-202ENST00000393119 C12orf57Q99622 126 aa12.66□□□□□ -0.38
MKS1-202ENST00000393119 GPR132Q9UNW8 380 aa12.66□□□□□ -0.38
MKS1-202ENST00000393119 C16orf97H3BN30 126 aa12.65□□□□□ -0.38
MKS1-202ENST00000393119 SPRY3O43610 288 aa12.65□□□□□ -0.38
MKS1-202ENST00000393119 NXPH2O95156 264 aa12.65□□□□□ -0.38
MKS1-202ENST00000393119 CD40P25942 277 aa12.65□□□□□ -0.38
MKS1-202ENST00000393119 EIF2S3LQ2VIR3 472 aaKnown RBP12.65□□□□□ -0.38
MKS1-202ENST00000393119 Q6P435 159 aa12.65□□□□□ -0.38
MKS1-202ENST00000393119 KCTD9Q7L273 389 aa12.65□□□□□ -0.38
MKS1-202ENST00000393119 MRGPRGQ86SM5 289 aa12.65□□□□□ -0.38
MKS1-202ENST00000393119 TMEM171Q8WVE6 324 aa12.65□□□□□ -0.38
MKS1-202ENST00000393119 METRNQ9UJH8 293 aa12.65□□□□□ -0.38
MKS1-202ENST00000393119 FXYD6-FXYD2A0A087WZ82 144 aa12.65□□□□□ -0.38
MKS1-202ENST00000393119 TRAV14DV4A0A0A6YYC5 116 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms