RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 SNURFLB1AK76 121 aa6.71□□□□□ -1.34
VTI1A-201ENST00000393077 P2RY10O00398 339 aa6.71□□□□□ -1.34
VTI1A-201ENST00000393077 SPINK4O60575 86 aa6.71□□□□□ -1.34
VTI1A-201ENST00000393077 SERF1AO75920 110 aa6.71□□□□□ -1.34
VTI1A-201ENST00000393077 UQCRFS1P47985 274 aa6.71□□□□□ -1.34
VTI1A-201ENST00000393077 RND2P52198 227 aa6.71□□□□□ -1.34
VTI1A-201ENST00000393077 SLC25A34Q6PIV7 304 aa6.71□□□□□ -1.34
VTI1A-201ENST00000393077 OR4N5Q8IXE1 308 aa6.71□□□□□ -1.34
VTI1A-201ENST00000393077 ZNF808Q8N4W9 903 aaPredicted RBP6.71□□□□□ -1.34
VTI1A-201ENST00000393077 LILRA3Q8N6C8 439 aaPredicted RBP6.71□□□□□ -1.34
VTI1A-201ENST00000393077 TMEM251Q8N6I4 163 aa6.71□□□□□ -1.34
VTI1A-201ENST00000393077 OR8G5Q8NG78 346 aa6.71□□□□□ -1.34
VTI1A-201ENST00000393077 RERGQ96A58 199 aaPredicted RBP6.71□□□□□ -1.34
VTI1A-201ENST00000393077 ZNF689Q96CS4 500 aaPredicted RBP6.71□□□□□ -1.34
VTI1A-201ENST00000393077 WDR61Q9GZS3 305 aaKnown RBP6.71□□□□□ -1.34
VTI1A-201ENST00000393077 OR10A2Q9H208 303 aa6.71□□□□□ -1.34
VTI1A-201ENST00000393077 ZNF331Q9NQX6 463 aaPredicted RBP6.71□□□□□ -1.34
VTI1A-201ENST00000393077 SCN10AQ9Y5Y9 1956 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 TSPOP30536 169 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 SLC25A1P53007 311 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 UBE2NP61088 152 aaKnown RBP6.7□□□□□ -1.34
VTI1A-201ENST00000393077 RTP5Q14D33 572 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 TMEM64Q6YI46 380 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 C1orf174Q8IYL3 243 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 ZNF683Q8IZ20 524 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 MRPL30Q8TCC3 161 aaKnown RBP6.7□□□□□ -1.34
VTI1A-201ENST00000393077 CPT1CQ8TCG5 803 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 P2RX4Q99571 388 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 C5orf66Q9H5L9 145 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 TBL2Q9Y4P3 447 aaKnown RBP6.7□□□□□ -1.34
VTI1A-201ENST00000393077 CABIN1Q9Y6J0 2220 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 SBF1O95248 1867 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 OTOFQ9HC10 1997 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 TRAV26-1A0A087WT03 109 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 LOC107986453A0A1B0GWG9 222 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 LRRC3CA6NJW4 275 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 TNFSF15O95150 251 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 IL18BPO95998 194 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 GZMHP20718 246 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 EPHA8P29322 1005 aaPredicted RBP6.7□□□□□ -1.34
VTI1A-201ENST00000393077 IER3P46695 156 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 DYNLT3P51808 116 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 GNB2P62879 340 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 LCN2P80188 198 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 PLAC9Q5JTB6 97 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 MARCH3Q86UD3 253 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 TMEM156Q8N614 296 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 FER1L6-AS1Q8NA97 138 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 KISS1RQ969F8 398 aaPredicted RBP6.7□□□□□ -1.34
VTI1A-201ENST00000393077 ARRDC3Q96B67 414 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 NEIL1Q96FI4 390 aaPredicted RBP6.7□□□□□ -1.34
VTI1A-201ENST00000393077 SFRP2Q96HF1 295 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 UHRF2Q96PU4 802 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 SPACA5Q96QH8 159 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 RAB11FIP5Q9BXF6 653 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 CFHR5Q9BXR6 569 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 CDH20Q9HBT6 801 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 MRM2Q9UI43 246 aaKnown RBP6.7□□□□□ -1.34
VTI1A-201ENST00000393077 DOCK11Q5JSL3 2073 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 KNTC1P50748 2209 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 A0A1B0GW64 132 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 SLC22A20A6NK97 555 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 NBEAP1P0C6P0 100 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 ZNF16P17020 682 aaPredicted RBP6.7□□□□□ -1.34
VTI1A-201ENST00000393077 TCN2P20062 427 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 CRYBA4P53673 196 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 TRA2BP62995 288 aaKnown RBP6.7□□□□□ -1.34
VTI1A-201ENST00000393077 CARD17Q5XLA6 110 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 FAM57BQ71RH2 274 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 PAQR4Q8N4S7 273 aaPredicted RBP6.7□□□□□ -1.34
VTI1A-201ENST00000393077 BOD1Q96IK1 185 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 ZNF160Q9HCG1 818 aa6.7□□□□□ -1.34
VTI1A-201ENST00000393077 CISD1Q9NZ45 108 aaKnown RBP6.7□□□□□ -1.34
VTI1A-201ENST00000393077 CD300LBA8K4G0 201 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 K7N7A8 449 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 M0R2Z0 102 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 NTSR1P30989 418 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 ZNF788Q6ZQV5 615 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 NPEPL1Q8NDH3 523 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 CLDND2Q8NHS1 167 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 APOBEC4Q8WW27 367 aaKnown RBP6.69□□□□□ -1.34
VTI1A-201ENST00000393077 WDYHV1Q96HA8 205 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 ABHD14AQ9BUJ0 271 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 FNDC4Q9H6D8 234 aaPredicted RBP6.69□□□□□ -1.34
VTI1A-201ENST00000393077 GEMIN7Q9H840 131 aaKnown RBP6.69□□□□□ -1.34
VTI1A-201ENST00000393077 PLXNA1Q9UIW2 1896 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 A0A1W2PR48 441 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 BMPR1BO00238 502 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 ZNF735P0CB33 412 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 FABP2P12104 132 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 AZU1P20160 251 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 UCP1P25874 307 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 CMPK1P30085 196 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 APOBEC1P41238 236 aaKnown RBP6.69□□□□□ -1.34
VTI1A-201ENST00000393077 NSDHLQ15738 373 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 OTPQ5XKR4 325 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 LILRA6Q6PI73 481 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 FA2HQ7L5A8 372 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 BPIFA4PQ86YQ2 179 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 ST6GALNAC6Q969X2 333 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms