RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 FLI1Q01543 452 aaPredicted RBP14.42□□□□□ -0.1
SCN3B-202ENST00000392770 ZNF665Q9H7R5 613 aa14.42□□□□□ -0.1
SCN3B-202ENST00000392770 RFPL3SP0C7P2 107 aa14.42□□□□□ -0.1
SCN3B-202ENST00000392770 UBE2G2P60604 165 aa14.42□□□□□ -0.1
SCN3B-202ENST00000392770 TMEM56Q96MV1 263 aa14.42□□□□□ -0.1
SCN3B-202ENST00000392770 SIGLEC12Q96PQ1 595 aa14.42□□□□□ -0.1
SCN3B-202ENST00000392770 UBTD1Q9HAC8 227 aa14.42□□□□□ -0.1
SCN3B-202ENST00000392770 FOSL1P15407 271 aa14.41□□□□□ -0.1
SCN3B-202ENST00000392770 RPS2P15880 293 aaKnown RBP14.41□□□□□ -0.1
SCN3B-202ENST00000392770 COL10A1Q03692 680 aa14.41□□□□□ -0.1
SCN3B-202ENST00000392770 LIAT1Q6ZQX7 453 aa14.41□□□□□ -0.1
SCN3B-202ENST00000392770 ZNF441Q8N8Z8 693 aa14.41□□□□□ -0.1
SCN3B-202ENST00000392770 PIN1P1O15428 100 aa14.41□□□□□ -0.1
SCN3B-202ENST00000392770 INHBBP09529 407 aa14.41□□□□□ -0.1
SCN3B-202ENST00000392770 MIDNQ504T8 468 aa14.41□□□□□ -0.1
SCN3B-202ENST00000392770 KHDC1LQ5JSQ8 128 aa14.41□□□□□ -0.1
SCN3B-202ENST00000392770 SMIM15Q7Z3B0 74 aa14.41□□□□□ -0.1
SCN3B-202ENST00000392770 AESQ08117 197 aa14.41□□□□□ -0.1
SCN3B-202ENST00000392770 OR2C3Q8N628 320 aa14.41□□□□□ -0.1
SCN3B-202ENST00000392770 NECAP1Q8NC96 275 aa14.41□□□□□ -0.1
SCN3B-202ENST00000392770 TCEAL7Q9BRU2 100 aa14.41□□□□□ -0.1
SCN3B-202ENST00000392770 AMMECR1Q9Y4X0 333 aaPredicted RBP14.41□□□□□ -0.1
SCN3B-202ENST00000392770 ZNF705GA8MUZ8 300 aaPredicted RBP14.41□□□□□ -0.1
SCN3B-202ENST00000392770 SUCLG1P53597 346 aaKnown RBP14.41□□□□□ -0.1
SCN3B-202ENST00000392770 DOCK4Q8N1I0 1966 aa14.41□□□□□ -0.1
SCN3B-202ENST00000392770 SLC25A4P12235 298 aa14.41□□□□□ -0.1
SCN3B-202ENST00000392770 OR4A4PQ8NGN8 299 aa14.41□□□□□ -0.1
SCN3B-202ENST00000392770 FCGR3AP08637 254 aa14.4□□□□□ -0.1
SCN3B-202ENST00000392770 CSN1S1P47710 185 aa14.4□□□□□ -0.1
SCN3B-202ENST00000392770 NDUFA6P56556 154 aa14.4□□□□□ -0.1
SCN3B-202ENST00000392770 CLEC9AQ6UXN8 241 aa14.4□□□□□ -0.1
SCN3B-202ENST00000392770 WNT2BQ93097 391 aa14.4□□□□□ -0.1
SCN3B-202ENST00000392770 RNF122Q9H9V4 155 aa14.4□□□□□ -0.1
SCN3B-202ENST00000392770 SLC2A9Q9NRM0 540 aa14.4□□□□□ -0.1
SCN3B-202ENST00000392770 HSBP1L1C9JCN9 74 aa14.4□□□□□ -0.1
SCN3B-202ENST00000392770 HLA-DQB1P01920 261 aa14.4□□□□□ -0.1
SCN3B-202ENST00000392770 TLE1Q04724 770 aa14.4□□□□□ -0.1
SCN3B-202ENST00000392770 FFAR4Q5NUL3 377 aa14.4□□□□□ -0.1
SCN3B-202ENST00000392770 OR8B3Q8NGG8 313 aa14.4□□□□□ -0.1
SCN3B-202ENST00000392770 RAB1CQ92928 201 aa14.4□□□□□ -0.1
SCN3B-202ENST00000392770 MISP3Q96FF7 219 aa14.4□□□□□ -0.1
SCN3B-202ENST00000392770 AP1S3Q96PC3 154 aa14.4□□□□□ -0.1
SCN3B-202ENST00000392770 OR8B2Q96RD0 313 aa14.4□□□□□ -0.1
SCN3B-202ENST00000392770 CA10Q9NS85 328 aa14.4□□□□□ -0.1
SCN3B-202ENST00000392770 FBXL17Q9UF56 701 aa14.4□□□□□ -0.1
SCN3B-202ENST00000392770 SFTA3P0C7M3 94 aa14.4□□□□□ -0.1
SCN3B-202ENST00000392770 POLR2GP62487 172 aaKnown RBP eCLIP14.4□□□□□ -0.1
SCN3B-202ENST00000392770 LINC00114Q6XXX2 140 aa14.4□□□□□ -0.1
SCN3B-202ENST00000392770 KDF1Q8NAX2 398 aaPredicted RBP14.4□□□□□ -0.1
SCN3B-202ENST00000392770 A0A1W2PP11 408 aa14.4□□□□□ -0.1
SCN3B-202ENST00000392770 DVL1O14640 695 aa14.4□□□□□ -0.1
SCN3B-202ENST00000392770 ADAM10O14672 748 aa14.4□□□□□ -0.1
SCN3B-202ENST00000392770 DVL1P1P54792 670 aaPredicted RBP14.4□□□□□ -0.1
SCN3B-202ENST00000392770 ARTNQ5T4W7 220 aa14.4□□□□□ -0.1
SCN3B-202ENST00000392770 TIPARPQ7Z3E1 657 aaKnown RBP14.4□□□□□ -0.1
SCN3B-202ENST00000392770 MRPL24Q96A35 216 aaKnown RBP14.4□□□□□ -0.1
SCN3B-202ENST00000392770 LRFN3Q9BTN0 628 aa14.4□□□□□ -0.1
SCN3B-202ENST00000392770 OR2W1Q9Y3N9 320 aa14.4□□□□□ -0.1
SCN3B-202ENST00000392770 UMODP07911 640 aa14.4□□□□□ -0.1
SCN3B-202ENST00000392770 MRPS11P82912 194 aaKnown RBP14.4□□□□□ -0.1
SCN3B-202ENST00000392770 MRPL14Q6P1L8 145 aaKnown RBP14.4□□□□□ -0.1
SCN3B-202ENST00000392770 R3HDM4Q96D70 268 aa14.4□□□□□ -0.1
SCN3B-202ENST00000392770 OR5H1A6NKK0 313 aa14.39□□□□□ -0.11
SCN3B-202ENST00000392770 HOXD4P09016 255 aaPredicted RBP14.39□□□□□ -0.11
SCN3B-202ENST00000392770 METTL15P1P0C7V9 234 aa14.39□□□□□ -0.11
SCN3B-202ENST00000392770 P2RY6Q15077 328 aa14.39□□□□□ -0.11
SCN3B-202ENST00000392770 UNQ9370/PRO34162Q6UXP9 181 aa14.39□□□□□ -0.11
SCN3B-202ENST00000392770 MMP26Q9NRE1 261 aa14.39□□□□□ -0.11
SCN3B-202ENST00000392770 A0A0G2JMM0 328 aa14.39□□□□□ -0.11
SCN3B-202ENST00000392770 A0A1W2PPB8 328 aa14.39□□□□□ -0.11
SCN3B-202ENST00000392770 A0A1W2PRS3 328 aa14.39□□□□□ -0.11
SCN3B-202ENST00000392770 KIR3DP1A8MWS1 328 aa14.39□□□□□ -0.11
SCN3B-202ENST00000392770 SEMA7AO75326 666 aa14.39□□□□□ -0.11
SCN3B-202ENST00000392770 B3GALNT1O75752 331 aa14.39□□□□□ -0.11
SCN3B-202ENST00000392770 NFAM1Q8NET5 270 aaPredicted RBP14.39□□□□□ -0.11
SCN3B-202ENST00000392770 TMEM230Q96A57 120 aa14.39□□□□□ -0.11
SCN3B-202ENST00000392770 LPAR5Q9H1C0 372 aa14.39□□□□□ -0.11
SCN3B-202ENST00000392770 OPRK1P41145 380 aa14.39□□□□□ -0.11
SCN3B-202ENST00000392770 TMEM41BQ5BJD5 291 aa14.39□□□□□ -0.11
SCN3B-202ENST00000392770 SLC25A38Q96DW6 304 aa14.39□□□□□ -0.11
SCN3B-202ENST00000392770 AKR1E2Q96JD6 320 aa14.39□□□□□ -0.11
SCN3B-202ENST00000392770 FKBP11Q9NYL4 201 aa14.39□□□□□ -0.11
SCN3B-202ENST00000392770 KCNK7Q9Y2U2 307 aa14.39□□□□□ -0.11
SCN3B-202ENST00000392770 RNASEK-C17orf49H0YIS7 233 aa14.39□□□□□ -0.11
SCN3B-202ENST00000392770 RAMP1O60894 148 aa14.39□□□□□ -0.11
SCN3B-202ENST00000392770 TMEM104Q8NE00 496 aa14.39□□□□□ -0.11
SCN3B-202ENST00000392770 GUCD1Q96NT3 240 aa14.39□□□□□ -0.11
SCN3B-202ENST00000392770 ZNF703Q9H7S9 590 aaPredicted RBP14.39□□□□□ -0.11
SCN3B-202ENST00000392770 DOCK6Q96HP0 2047 aa14.39□□□□□ -0.11
SCN3B-202ENST00000392770 CLEC3BP05452 202 aa14.38□□□□□ -0.11
SCN3B-202ENST00000392770 CELA3AP09093 270 aa14.38□□□□□ -0.11
SCN3B-202ENST00000392770 SEZ6L2Q6UXD5 910 aa14.38□□□□□ -0.11
SCN3B-202ENST00000392770 DBX2Q6ZNG2 339 aa14.38□□□□□ -0.11
SCN3B-202ENST00000392770 OR4S2Q8NH73 311 aa14.38□□□□□ -0.11
SCN3B-202ENST00000392770 SMIM7Q9BQ49 75 aa14.38□□□□□ -0.11
SCN3B-202ENST00000392770 OPN1MWP04001 364 aa14.38□□□□□ -0.11
SCN3B-202ENST00000392770 CRHP06850 196 aa14.38□□□□□ -0.11
SCN3B-202ENST00000392770 OPN1MW2P0DN77 364 aa14.38□□□□□ -0.11
SCN3B-202ENST00000392770 OPN1MW3P0DN78 364 aa14.38□□□□□ -0.11
SCN3B-202ENST00000392770 P2RY1P47900 373 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms