RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 Q56UQ5 140 aa12.68□□□□□ -0.38
PSME4-201ENST00000389993 OR52L2PQ8NGH6 319 aa12.68□□□□□ -0.38
PSME4-201ENST00000389993 PGLYRP3Q96LB9 341 aa12.68□□□□□ -0.38
PSME4-201ENST00000389993 PCDHGA9Q9Y5G4 932 aaKnown RBP12.68□□□□□ -0.38
PSME4-201ENST00000389993 TRAPPC2P0DI81 140 aa12.68□□□□□ -0.38
PSME4-201ENST00000389993 TRAPPC2BP0DI82 140 aa12.68□□□□□ -0.38
PSME4-201ENST00000389993 CD37P11049 281 aa12.68□□□□□ -0.38
PSME4-201ENST00000389993 CHAC2Q8WUX2 184 aa12.68□□□□□ -0.38
PSME4-201ENST00000389993 KCNK7Q9Y2U2 307 aa12.68□□□□□ -0.38
PSME4-201ENST00000389993 J3KRW8 73 aa12.68□□□□□ -0.38
PSME4-201ENST00000389993 ALX3O95076 343 aa12.68□□□□□ -0.38
PSME4-201ENST00000389993 PPP1R32Q7Z5V6 425 aa12.68□□□□□ -0.38
PSME4-201ENST00000389993 KCNK17Q96T54 332 aa12.68□□□□□ -0.38
PSME4-201ENST00000389993 TMEM204Q9BSN7 226 aa12.68□□□□□ -0.38
PSME4-201ENST00000389993 POMT1Q9Y6A1 747 aa12.68□□□□□ -0.38
PSME4-201ENST00000389993 CYB5R3P00387 301 aaPredicted RBP12.68□□□□□ -0.38
PSME4-201ENST00000389993 FAM87AP0C7U9 286 aa12.68□□□□□ -0.38
PSME4-201ENST00000389993 PSG2P11465 335 aa12.68□□□□□ -0.38
PSME4-201ENST00000389993 ABHD14BQ96IU4 210 aa12.68□□□□□ -0.38
PSME4-201ENST00000389993 MARVELD1Q9BSK0 173 aa12.68□□□□□ -0.38
PSME4-201ENST00000389993 RHOFQ9HBH0 211 aa12.68□□□□□ -0.38
PSME4-201ENST00000389993 BTBD17A6NE02 478 aa12.67□□□□□ -0.38
PSME4-201ENST00000389993 ERVS71-1P61550 626 aa12.67□□□□□ -0.38
PSME4-201ENST00000389993 ACTR3CQ9C0K3 210 aaPredicted RBP12.67□□□□□ -0.38
PSME4-201ENST00000389993 TNXAQ16473 311 aa12.67□□□□□ -0.38
PSME4-201ENST00000389993 IGLV1-36A0A0B4J1U3 117 aa12.67□□□□□ -0.38
PSME4-201ENST00000389993 C11orf91Q3C1V1 193 aa12.67□□□□□ -0.38
PSME4-201ENST00000389993 ZBTB37Q5TC79 503 aa12.67□□□□□ -0.38
PSME4-201ENST00000389993 DBX2Q6ZNG2 339 aa12.67□□□□□ -0.38
PSME4-201ENST00000389993 ZNF439Q8NDP4 499 aa12.67□□□□□ -0.38
PSME4-201ENST00000389993 BARX1Q9HBU1 254 aaPredicted RBP12.67□□□□□ -0.38
PSME4-201ENST00000389993 FBXL17Q9UF56 701 aa12.67□□□□□ -0.38
PSME4-201ENST00000389993 DSPPQ9NZW4 1301 aa12.67□□□□□ -0.38
PSME4-201ENST00000389993 A0A1W2PPC1 479 aa12.67□□□□□ -0.38
PSME4-201ENST00000389993 TRDCB7Z8K6 153 aa12.67□□□□□ -0.38
PSME4-201ENST00000389993 SCTP09683 121 aa12.67□□□□□ -0.38
PSME4-201ENST00000389993 KLF9Q13886 244 aaPredicted RBP12.67□□□□□ -0.38
PSME4-201ENST00000389993 ZDHHC22Q8N966 263 aa12.67□□□□□ -0.38
PSME4-201ENST00000389993 PIGMQ9H3S5 423 aa12.67□□□□□ -0.38
PSME4-201ENST00000389993 CLCF1Q9UBD9 225 aa12.67□□□□□ -0.38
PSME4-201ENST00000389993 CYB5R1Q9UHQ9 305 aa12.67□□□□□ -0.38
PSME4-201ENST00000389993 SFTA3P0C7M3 94 aa12.67□□□□□ -0.38
PSME4-201ENST00000389993 RPS4Y1P22090 263 aaKnown RBP12.67□□□□□ -0.38
PSME4-201ENST00000389993 NPBWR2P48146 333 aa12.67□□□□□ -0.38
PSME4-201ENST00000389993 GMPPAQ96IJ6 420 aaPredicted RBP12.67□□□□□ -0.38
PSME4-201ENST00000389993 AP1S3Q96PC3 154 aa12.67□□□□□ -0.38
PSME4-201ENST00000389993 PIN1P1O15428 100 aa12.66□□□□□ -0.38
PSME4-201ENST00000389993 GABRA1P14867 456 aa12.66□□□□□ -0.38
PSME4-201ENST00000389993 ZNF528Q3MIS6 628 aa12.66□□□□□ -0.38
PSME4-201ENST00000389993 POM121L2Q96KW2 1035 aa12.66□□□□□ -0.38
PSME4-201ENST00000389993 IGKV3-11P04433 115 aa12.66□□□□□ -0.38
PSME4-201ENST00000389993 ORM2P19652 201 aa12.66□□□□□ -0.38
PSME4-201ENST00000389993 IL36GQ9NZH8 169 aa12.66□□□□□ -0.38
PSME4-201ENST00000389993 NKX2-6A6NCS4 301 aa12.66□□□□□ -0.38
PSME4-201ENST00000389993 CHST1O43916 411 aa12.66□□□□□ -0.38
PSME4-201ENST00000389993 CFHR1Q03591 330 aa12.66□□□□□ -0.38
PSME4-201ENST00000389993 ACOT6Q3I5F7 207 aaPredicted RBP12.66□□□□□ -0.38
PSME4-201ENST00000389993 TMEM41BQ5BJD5 291 aa12.66□□□□□ -0.38
PSME4-201ENST00000389993 Q8IYB0 196 aa12.66□□□□□ -0.38
PSME4-201ENST00000389993 EAF1Q96JC9 268 aaPredicted RBP12.66□□□□□ -0.38
PSME4-201ENST00000389993 TGIF2Q9GZN2 237 aa12.66□□□□□ -0.38
PSME4-201ENST00000389993 LIPGQ9Y5X9 500 aa12.66□□□□□ -0.38
PSME4-201ENST00000389993 DCAF12L2Q5VW00 463 aa12.66□□□□□ -0.38
PSME4-201ENST00000389993 GUCD1Q96NT3 240 aa12.66□□□□□ -0.38
PSME4-201ENST00000389993 SMIM7Q9BQ49 75 aa12.66□□□□□ -0.38
PSME4-201ENST00000389993 PCGF1Q9BSM1 259 aa12.66□□□□□ -0.38
PSME4-201ENST00000389993 RAB33BQ9H082 229 aa12.66□□□□□ -0.38
PSME4-201ENST00000389993 SLC17A5Q9NRA2 495 aa12.66□□□□□ -0.38
PSME4-201ENST00000389993 SLC38A11Q08AI6 406 aa12.66□□□□□ -0.38
PSME4-201ENST00000389993 C1orf185Q5T7R7 199 aa12.66□□□□□ -0.38
PSME4-201ENST00000389993 SSMEM1Q8WWF3 244 aa12.66□□□□□ -0.38
PSME4-201ENST00000389993 PLEKHA2Q9HB19 425 aa12.66□□□□□ -0.38
PSME4-201ENST00000389993 GVINP1Q7Z2Y8 2422 aa12.66□□□□□ -0.38
PSME4-201ENST00000389993 PRR19A6NJB7 356 aa12.66□□□□□ -0.38
PSME4-201ENST00000389993 C16orf97H3BN30 126 aa12.66□□□□□ -0.38
PSME4-201ENST00000389993 K7ESF4 209 aa12.66□□□□□ -0.38
PSME4-201ENST00000389993 ZNF17P17021 662 aa12.66□□□□□ -0.38
PSME4-201ENST00000389993 GALP22466 123 aa12.66□□□□□ -0.38
PSME4-201ENST00000389993 UCP2P55851 309 aa12.66□□□□□ -0.38
PSME4-201ENST00000389993 KLHDC3Q9BQ90 382 aa12.66□□□□□ -0.38
PSME4-201ENST00000389993 RCC1P18754 421 aaPredicted RBP12.65□□□□□ -0.38
PSME4-201ENST00000389993 H3F3AP84243 136 aa12.65□□□□□ -0.38
PSME4-201ENST00000389993 OR2V2Q96R30 315 aa12.65□□□□□ -0.38
PSME4-201ENST00000389993 CHST5Q9GZS9 411 aa12.65□□□□□ -0.38
PSME4-201ENST00000389993 TP53BP1Q12888 1972 aaPredicted RBP12.65□□□□□ -0.38
PSME4-201ENST00000389993 MYLKQ15746 1914 aa12.65□□□□□ -0.38
PSME4-201ENST00000389993 TAAR5O14804 337 aa12.65□□□□□ -0.38
PSME4-201ENST00000389993 SLC25A30Q5SVS4 291 aa12.65□□□□□ -0.38
PSME4-201ENST00000389993 C15orf54Q8N8G6 183 aa12.65□□□□□ -0.38
PSME4-201ENST00000389993 PPYP01298 95 aa12.65□□□□□ -0.38
PSME4-201ENST00000389993 TFF1P04155 84 aa12.65□□□□□ -0.38
PSME4-201ENST00000389993 TMEM33P57088 247 aa12.65□□□□□ -0.38
PSME4-201ENST00000389993 SCGB2A2Q13296 93 aa12.65□□□□□ -0.38
PSME4-201ENST00000389993 GGTLC2Q14390 218 aa12.65□□□□□ -0.38
PSME4-201ENST00000389993 IZUMO4Q1ZYL8 232 aa12.65□□□□□ -0.38
PSME4-201ENST00000389993 AURKAIP1Q9NWT8 199 aaPredicted RBP12.65□□□□□ -0.38
PSME4-201ENST00000389993 VSIG10L2P0DP72 767 aa12.65□□□□□ -0.39
PSME4-201ENST00000389993 NXF2Q9GZY0 626 aaKnown RBP12.65□□□□□ -0.39
PSME4-201ENST00000389993 MPC1Q9Y5U8 109 aa12.65□□□□□ -0.39
PSME4-201ENST00000389993 EP300Q09472 2414 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms