RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 IL24Q13007 206 aa12.49□□□□□ -0.41
RTF1-201ENST00000389629 UNC119Q13432 240 aa12.49□□□□□ -0.41
RTF1-201ENST00000389629 PIGYQ3MUY2 71 aa12.49□□□□□ -0.41
RTF1-201ENST00000389629 ZNF331Q9NQX6 463 aaPredicted RBP12.49□□□□□ -0.41
RTF1-201ENST00000389629 CLCF1Q9UBD9 225 aa12.49□□□□□ -0.41
RTF1-201ENST00000389629 NOSIPQ9Y314 301 aaKnown RBP12.49□□□□□ -0.41
RTF1-201ENST00000389629 PDCD6O75340 191 aa12.49□□□□□ -0.41
RTF1-201ENST00000389629 PPYP01298 95 aa12.49□□□□□ -0.41
RTF1-201ENST00000389629 ZNF124Q15973 351 aa12.49□□□□□ -0.41
RTF1-201ENST00000389629 C16orf82Q7Z2V1 217 aa12.49□□□□□ -0.41
RTF1-201ENST00000389629 GAPTQ8N292 157 aa12.49□□□□□ -0.41
RTF1-201ENST00000389629 OR10AD1Q8NGE0 317 aa12.49□□□□□ -0.41
RTF1-201ENST00000389629 TNFSF11O14788 317 aa12.48□□□□□ -0.41
RTF1-201ENST00000389629 ISG15P05161 165 aa12.48□□□□□ -0.41
RTF1-201ENST00000389629 CCKARP32238 428 aa12.48□□□□□ -0.41
RTF1-201ENST00000389629 TMEM252Q8N6L7 170 aa12.48□□□□□ -0.41
RTF1-201ENST00000389629 RSG1Q9BU20 258 aa12.48□□□□□ -0.41
RTF1-201ENST00000389629 VAX2Q9UIW0 290 aa12.48□□□□□ -0.41
RTF1-201ENST00000389629 TIMM10BQ9Y5J6 103 aa12.48□□□□□ -0.41
RTF1-201ENST00000389629 A0A1B0GTQ1 180 aa12.48□□□□□ -0.41
RTF1-201ENST00000389629 OR8U8P0C7N1 319 aa12.48□□□□□ -0.41
RTF1-201ENST00000389629 GPM6AP51674 278 aa12.48□□□□□ -0.41
RTF1-201ENST00000389629 ZNF519Q8TB69 540 aa12.48□□□□□ -0.41
RTF1-201ENST00000389629 RAB40CQ96S21 281 aa12.48□□□□□ -0.41
RTF1-201ENST00000389629 LRP5LA4QPB2 252 aa12.48□□□□□ -0.41
RTF1-201ENST00000389629 LMO7DNF2Z398 122 aa12.48□□□□□ -0.41
RTF1-201ENST00000389629 LBX1P52954 281 aa12.48□□□□□ -0.41
RTF1-201ENST00000389629 EDDM3BP56851 147 aa12.48□□□□□ -0.41
RTF1-201ENST00000389629 TAS2R60P59551 318 aa12.48□□□□□ -0.41
RTF1-201ENST00000389629 ZNF774Q6NX45 483 aa12.48□□□□□ -0.41
RTF1-201ENST00000389629 CTDSP1Q9GZU7 261 aa12.48□□□□□ -0.41
RTF1-201ENST00000389629 FCN1O00602 326 aa12.48□□□□□ -0.41
RTF1-201ENST00000389629 ZNF17P17021 662 aa12.48□□□□□ -0.41
RTF1-201ENST00000389629 FKBP2P26885 142 aaKnown RBP12.48□□□□□ -0.41
RTF1-201ENST00000389629 FUT6P51993 359 aa12.48□□□□□ -0.41
RTF1-201ENST00000389629 CXorf66Q5JRM2 361 aaPredicted RBP12.48□□□□□ -0.41
RTF1-201ENST00000389629 GCNT2Q8N0V5 402 aa12.48□□□□□ -0.41
RTF1-201ENST00000389629 VN1R17PQ8TDU5 208 aa12.48□□□□□ -0.41
RTF1-201ENST00000389629 PCGF1Q9BSM1 259 aa12.48□□□□□ -0.41
RTF1-201ENST00000389629 DUXBA0A1W2PPF3 345 aa12.47□□□□□ -0.41
RTF1-201ENST00000389629 GRPP07492 148 aa12.47□□□□□ -0.41
RTF1-201ENST00000389629 FOXK1P85037 733 aa12.47□□□□□ -0.41
RTF1-201ENST00000389629 SPINK9Q5DT21 86 aa12.47□□□□□ -0.41
RTF1-201ENST00000389629 C9orf50Q5SZB4 431 aa12.47□□□□□ -0.41
RTF1-201ENST00000389629 LRRC75AQ8NAA5 344 aa12.47□□□□□ -0.41
RTF1-201ENST00000389629 GNRHR2Q96P88 292 aa12.47□□□□□ -0.41
RTF1-201ENST00000389629 HIPK2Q9H2X6 1198 aa12.47□□□□□ -0.41
RTF1-201ENST00000389629 VDAC1P21796 283 aa12.47□□□□□ -0.41
RTF1-201ENST00000389629 GALNSP34059 522 aa12.47□□□□□ -0.41
RTF1-201ENST00000389629 FOXO1Q12778 655 aa12.47□□□□□ -0.41
RTF1-201ENST00000389629 RPS19BP1Q86WX3 136 aaKnown RBP12.47□□□□□ -0.41
RTF1-201ENST00000389629 OR1P1Q8NH06 330 aa12.47□□□□□ -0.41
RTF1-201ENST00000389629 SPACA9Q96E40 222 aaPredicted RBP12.47□□□□□ -0.41
RTF1-201ENST00000389629 CCDC74BQ96LY2 380 aa12.47□□□□□ -0.41
RTF1-201ENST00000389629 CCL28Q9NRJ3 127 aa12.47□□□□□ -0.41
RTF1-201ENST00000389629 SLC35D1Q9NTN3 355 aa12.47□□□□□ -0.41
RTF1-201ENST00000389629 C5orf49A4QMS7 147 aa12.47□□□□□ -0.41
RTF1-201ENST00000389629 GABRA2P47869 451 aa12.47□□□□□ -0.41
RTF1-201ENST00000389629 ERVFC1-1P60608 527 aa12.47□□□□□ -0.41
RTF1-201ENST00000389629 PAX5Q02548 391 aa12.47□□□□□ -0.41
RTF1-201ENST00000389629 SHHQ15465 462 aa12.47□□□□□ -0.41
RTF1-201ENST00000389629 ZNF468Q5VIY5 522 aaPredicted RBP12.47□□□□□ -0.41
RTF1-201ENST00000389629 LURAP1LQ8IV03 231 aa12.47□□□□□ -0.41
RTF1-201ENST00000389629 OR10G4Q8NGN3 311 aa12.47□□□□□ -0.41
RTF1-201ENST00000389629 OR10G9Q8NGN4 311 aa12.47□□□□□ -0.41
RTF1-201ENST00000389629 OR10G7Q8NGN6 311 aa12.47□□□□□ -0.41
RTF1-201ENST00000389629 ARL2-SNX15V9GYD0 113 aa12.47□□□□□ -0.41
RTF1-201ENST00000389629 AQP7P3A6NL99 342 aa12.47□□□□□ -0.41
RTF1-201ENST00000389629 CXCL13O43927 109 aa12.47□□□□□ -0.41
RTF1-201ENST00000389629 SPNS3Q6ZMD2 512 aa12.47□□□□□ -0.41
RTF1-201ENST00000389629 Q6ZN92 141 aa12.47□□□□□ -0.41
RTF1-201ENST00000389629 TMEM9BQ9NQ34 198 aa12.47□□□□□ -0.41
RTF1-201ENST00000389629 NAT8BQ9UHF3 227 aa12.47□□□□□ -0.41
RTF1-201ENST00000389629 MED12Q93074 2177 aa12.46□□□□□ -0.41
RTF1-201ENST00000389629 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.46□□□□□ -0.41
RTF1-201ENST00000389629 CYB5R3P00387 301 aaPredicted RBP12.46□□□□□ -0.41
RTF1-201ENST00000389629 SLC22A18ASQ8N1D0 253 aa12.46□□□□□ -0.41
RTF1-201ENST00000389629 OR1K1Q8NGR3 316 aa12.46□□□□□ -0.41
RTF1-201ENST00000389629 SMDT1Q9H4I9 107 aa12.46□□□□□ -0.41
RTF1-201ENST00000389629 LIN7CQ9NUP9 197 aaKnown RBP12.46□□□□□ -0.41
RTF1-201ENST00000389629 DHRS7CA6NNS2 312 aa12.46□□□□□ -0.41
RTF1-201ENST00000389629 ZNF732B4DXR9 585 aa12.46□□□□□ -0.41
RTF1-201ENST00000389629 ZNF814B7Z6K7 855 aa12.46□□□□□ -0.41
RTF1-201ENST00000389629 ZNF735P0CB33 412 aa12.46□□□□□ -0.41
RTF1-201ENST00000389629 BCL2P10415 239 aa12.46□□□□□ -0.41
RTF1-201ENST00000389629 GAB4Q2WGN9 574 aa12.46□□□□□ -0.41
RTF1-201ENST00000389629 OR6X1Q8NH79 312 aa12.46□□□□□ -0.41
RTF1-201ENST00000389629 FAM206AQ9NX38 181 aa12.46□□□□□ -0.41
RTF1-201ENST00000389629 CDS2O95674 445 aa12.46□□□□□ -0.42
RTF1-201ENST00000389629 AMTP48728 403 aa12.46□□□□□ -0.42
RTF1-201ENST00000389629 FABP6P51161 128 aa12.46□□□□□ -0.42
RTF1-201ENST00000389629 EDDM3AQ14507 147 aa12.46□□□□□ -0.42
RTF1-201ENST00000389629 C1orf53Q5VUE5 145 aa12.46□□□□□ -0.42
RTF1-201ENST00000389629 OR1F12Q8NHA8 337 aa12.46□□□□□ -0.42
RTF1-201ENST00000389629 NAT6Q93015 286 aa12.46□□□□□ -0.42
RTF1-201ENST00000389629 SLC7A10Q9NS82 523 aa12.46□□□□□ -0.42
RTF1-201ENST00000389629 LOC102724200A0A096LPH7 203 aaPredicted RBP12.46□□□□□ -0.42
RTF1-201ENST00000389629 CRISP2P16562 243 aa12.46□□□□□ -0.42
RTF1-201ENST00000389629 OR10J1P30954 320 aa12.46□□□□□ -0.42
RTF1-201ENST00000389629 PRAMEF5Q5TYX0 476 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms