RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 CXCL12P48061 93 aa11.49□□□□□ -0.57
TRAPPC9-201ENST00000389328 RNF151Q2KHN1 245 aa11.49□□□□□ -0.57
TRAPPC9-201ENST00000389328 LYSMD4Q5XG99 296 aa11.49□□□□□ -0.57
TRAPPC9-201ENST00000389328 BTNL8Q6UX41 500 aa11.49□□□□□ -0.57
TRAPPC9-201ENST00000389328 OR2T10Q8NGZ9 312 aa11.49□□□□□ -0.57
TRAPPC9-201ENST00000389328 ZNF665Q9H7R5 613 aa11.49□□□□□ -0.57
TRAPPC9-201ENST00000389328 GPR27Q9NS67 375 aa11.49□□□□□ -0.57
TRAPPC9-201ENST00000389328 ZSWIM8A7E2V4 1837 aa11.49□□□□□ -0.57
TRAPPC9-201ENST00000389328 TNS1Q9HBL0 1735 aaKnown RBP11.49□□□□□ -0.57
TRAPPC9-201ENST00000389328 CRYM-AS1A6NIL9 109 aa11.49□□□□□ -0.57
TRAPPC9-201ENST00000389328 SPINK4O60575 86 aa11.49□□□□□ -0.57
TRAPPC9-201ENST00000389328 TMEM50BP56557 158 aa11.49□□□□□ -0.57
TRAPPC9-201ENST00000389328 SPINK9Q5DT21 86 aa11.49□□□□□ -0.57
TRAPPC9-201ENST00000389328 LINC00696Q6ZRV3 163 aa11.49□□□□□ -0.57
TRAPPC9-201ENST00000389328 RSG1Q9BU20 258 aa11.49□□□□□ -0.57
TRAPPC9-201ENST00000389328 RPH3ALQ9UNE2 315 aa11.49□□□□□ -0.57
TRAPPC9-201ENST00000389328 ARHGEF17Q96PE2 2063 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC9-201ENST00000389328 TRAV39A0A0B4J263 110 aa11.48□□□□□ -0.57
TRAPPC9-201ENST00000389328 TRDCB7Z8K6 153 aa11.48□□□□□ -0.57
TRAPPC9-201ENST00000389328 GCH1P30793 250 aa11.48□□□□□ -0.57
TRAPPC9-201ENST00000389328 LSM6P62312 80 aaKnown RBP11.48□□□□□ -0.57
TRAPPC9-201ENST00000389328 SMAD4Q13485 552 aaKnown RBP11.48□□□□□ -0.57
TRAPPC9-201ENST00000389328 GAMTQ14353 236 aa11.48□□□□□ -0.57
TRAPPC9-201ENST00000389328 CNEP1R1Q8N9A8 125 aa11.48□□□□□ -0.57
TRAPPC9-201ENST00000389328 POC1BQ8TC44 478 aa11.48□□□□□ -0.57
TRAPPC9-201ENST00000389328 APH1AQ96BI3 265 aa11.48□□□□□ -0.57
TRAPPC9-201ENST00000389328 DTYMKP23919 212 aa11.48□□□□□ -0.57
TRAPPC9-201ENST00000389328 HIST1H3AP68431 136 aa11.48□□□□□ -0.57
TRAPPC9-201ENST00000389328 EXT1Q16394 746 aa11.48□□□□□ -0.57
TRAPPC9-201ENST00000389328 ZNF573Q86YE8 665 aa11.48□□□□□ -0.57
TRAPPC9-201ENST00000389328 FAM58AQ8N1B3 248 aa11.48□□□□□ -0.57
TRAPPC9-201ENST00000389328 ZNF385AQ96PM9 386 aaKnown RBP11.48□□□□□ -0.57
TRAPPC9-201ENST00000389328 RTBDNQ9BSG5 229 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC9-201ENST00000389328 ZNF586Q9NXT0 402 aa11.48□□□□□ -0.57
TRAPPC9-201ENST00000389328 MTCH1Q9NZJ7 389 aa11.48□□□□□ -0.57
TRAPPC9-201ENST00000389328 NAT8Q9UHE5 227 aa11.48□□□□□ -0.57
TRAPPC9-201ENST00000389328 LHX6Q9UPM6 363 aa11.48□□□□□ -0.57
TRAPPC9-201ENST00000389328 B4DEV8 164 aa11.48□□□□□ -0.57
TRAPPC9-201ENST00000389328 SYNGR2O43760 224 aa11.48□□□□□ -0.57
TRAPPC9-201ENST00000389328 MELTFP08582 738 aa11.48□□□□□ -0.57
TRAPPC9-201ENST00000389328 ZNF25P17030 456 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC9-201ENST00000389328 EDDM3BP56851 147 aa11.48□□□□□ -0.57
TRAPPC9-201ENST00000389328 KHDC3LQ587J8 217 aa11.48□□□□□ -0.57
TRAPPC9-201ENST00000389328 OR1K1Q8NGR3 316 aa11.48□□□□□ -0.57
TRAPPC9-201ENST00000389328 PPP1R35Q8TAP8 253 aa11.48□□□□□ -0.57
TRAPPC9-201ENST00000389328 ADIPOR1Q96A54 375 aa11.48□□□□□ -0.57
TRAPPC9-201ENST00000389328 RIMS4Q9H426 269 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC9-201ENST00000389328 TREM2Q9NZC2 230 aa11.48□□□□□ -0.57
TRAPPC9-201ENST00000389328 VWA8A3KMH1 1905 aa11.47□□□□□ -0.57
TRAPPC9-201ENST00000389328 COLCA2A8K830 154 aa11.47□□□□□ -0.57
TRAPPC9-201ENST00000389328 M0R143 59 aa11.47□□□□□ -0.57
TRAPPC9-201ENST00000389328 CYB561P49447 251 aa11.47□□□□□ -0.57
TRAPPC9-201ENST00000389328 WDR25Q64LD2 544 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC9-201ENST00000389328 TMEM68Q96MH6 324 aa11.47□□□□□ -0.57
TRAPPC9-201ENST00000389328 COA4Q9NYJ1 87 aa11.47□□□□□ -0.57
TRAPPC9-201ENST00000389328 F8VVB4 439 aa11.47□□□□□ -0.57
TRAPPC9-201ENST00000389328 F8VWA3 439 aa11.47□□□□□ -0.57
TRAPPC9-201ENST00000389328 PIAS2O75928 621 aa11.47□□□□□ -0.57
TRAPPC9-201ENST00000389328 RNF224P0DH78 156 aa11.47□□□□□ -0.57
TRAPPC9-201ENST00000389328 ADCYAP1P18509 176 aa11.47□□□□□ -0.57
TRAPPC9-201ENST00000389328 WIPI1Q5MNZ9 446 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC9-201ENST00000389328 ZNF468Q5VIY5 522 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC9-201ENST00000389328 STRADBQ9C0K7 418 aa11.47□□□□□ -0.57
TRAPPC9-201ENST00000389328 VAX2Q9UIW0 290 aa11.47□□□□□ -0.57
TRAPPC9-201ENST00000389328 WDR90Q96KV7 1748 aa11.47□□□□□ -0.57
TRAPPC9-201ENST00000389328 H0Y8G0 127 aa11.47□□□□□ -0.57
TRAPPC9-201ENST00000389328 ZNHIT1O43257 154 aa11.47□□□□□ -0.57
TRAPPC9-201ENST00000389328 TRGC1P0CF51 173 aa11.47□□□□□ -0.57
TRAPPC9-201ENST00000389328 ZP4Q12836 540 aa11.47□□□□□ -0.57
TRAPPC9-201ENST00000389328 PRDX4Q13162 271 aa11.47□□□□□ -0.57
TRAPPC9-201ENST00000389328 MYPOPQ86VE0 399 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC9-201ENST00000389328 OR10G4Q8NGN3 311 aa11.47□□□□□ -0.57
TRAPPC9-201ENST00000389328 OR10G9Q8NGN4 311 aa11.47□□□□□ -0.57
TRAPPC9-201ENST00000389328 OR10G7Q8NGN6 311 aa11.47□□□□□ -0.57
TRAPPC9-201ENST00000389328 VAMP8Q9BV40 100 aa11.47□□□□□ -0.57
TRAPPC9-201ENST00000389328 PISDQ9UG56 409 aa11.47□□□□□ -0.57
TRAPPC9-201ENST00000389328 CBY1Q9Y3M2 126 aa11.47□□□□□ -0.57
TRAPPC9-201ENST00000389328 CBR3O75828 277 aa11.47□□□□□ -0.57
TRAPPC9-201ENST00000389328 IGFBP3P17936 291 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC9-201ENST00000389328 RAB4AP20338 218 aa11.47□□□□□ -0.57
TRAPPC9-201ENST00000389328 DSCR4P56555 118 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC9-201ENST00000389328 GCNT2Q8N0V5 402 aa11.47□□□□□ -0.57
TRAPPC9-201ENST00000389328 SELENOVP59797 346 aa11.46□□□□□ -0.57
TRAPPC9-201ENST00000389328 PHYHD1Q5SRE7 291 aa11.46□□□□□ -0.57
TRAPPC9-201ENST00000389328 RASL10BQ96S79 203 aa11.46□□□□□ -0.57
TRAPPC9-201ENST00000389328 SMDT1Q9H4I9 107 aa11.46□□□□□ -0.57
TRAPPC9-201ENST00000389328 Q9N2K0 584 aa11.46□□□□□ -0.57
TRAPPC9-201ENST00000389328 TRAV34A0A0B4J273 112 aa11.46□□□□□ -0.57
TRAPPC9-201ENST00000389328 AQP7O14520 342 aa11.46□□□□□ -0.57
TRAPPC9-201ENST00000389328 HYAL1Q12794 435 aa11.46□□□□□ -0.57
TRAPPC9-201ENST00000389328 MRGPRFQ96AM1 343 aa11.46□□□□□ -0.57
TRAPPC9-201ENST00000389328 TAAR9Q96RI9 348 aa11.46□□□□□ -0.57
TRAPPC9-201ENST00000389328 IL17BQ9UHF5 180 aa11.46□□□□□ -0.57
TRAPPC9-201ENST00000389328 POU2F2P09086 479 aa11.46□□□□□ -0.58
TRAPPC9-201ENST00000389328 HLA-GP17693 338 aa11.46□□□□□ -0.58
TRAPPC9-201ENST00000389328 PAQR4Q8N4S7 273 aaPredicted RBP11.46□□□□□ -0.58
TRAPPC9-201ENST00000389328 TMEM230Q96A57 120 aa11.46□□□□□ -0.58
TRAPPC9-201ENST00000389328 RAMP1O60894 148 aa11.45□□□□□ -0.58
TRAPPC9-201ENST00000389328 PITX3O75364 302 aa11.45□□□□□ -0.58
TRAPPC9-201ENST00000389328 IGHV4-34P06331 123 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms