RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 SLC2A9Q9NRM0 540 aa6.81□□□□□ -1.32
PDLIM5-204ENST00000380176 SCTP09683 121 aa6.81□□□□□ -1.32
PDLIM5-204ENST00000380176 APLNRP35414 380 aa6.81□□□□□ -1.32
PDLIM5-204ENST00000380176 ABCA11PQ4W5N1 156 aa6.81□□□□□ -1.32
PDLIM5-204ENST00000380176 ARSJQ5FYB0 599 aaPredicted RBP6.81□□□□□ -1.32
PDLIM5-204ENST00000380176 HAGHLQ6PII5 290 aaPredicted RBP6.81□□□□□ -1.32
PDLIM5-204ENST00000380176 LYZL2Q7Z4W2 148 aa6.81□□□□□ -1.32
PDLIM5-204ENST00000380176 C17orf78Q8N4C9 275 aa6.81□□□□□ -1.32
PDLIM5-204ENST00000380176 EIF4E3Q8N5X7 224 aaKnown RBP6.81□□□□□ -1.32
PDLIM5-204ENST00000380176 OR5T2Q8NGG2 359 aa6.81□□□□□ -1.32
PDLIM5-204ENST00000380176 OR1S2Q8NGQ3 325 aa6.81□□□□□ -1.32
PDLIM5-204ENST00000380176 STOML3Q8TAV4 291 aa6.81□□□□□ -1.32
PDLIM5-204ENST00000380176 TMED6Q8WW62 240 aa6.81□□□□□ -1.32
PDLIM5-204ENST00000380176 OR5P3Q8WZ94 311 aa6.81□□□□□ -1.32
PDLIM5-204ENST00000380176 AQP10Q96PS8 301 aa6.81□□□□□ -1.32
PDLIM5-204ENST00000380176 GPHA2Q96T91 129 aa6.81□□□□□ -1.32
PDLIM5-204ENST00000380176 SLC5A7Q9GZV3 580 aa6.81□□□□□ -1.32
PDLIM5-204ENST00000380176 NAA60Q9H7X0 242 aa6.81□□□□□ -1.32
PDLIM5-204ENST00000380176 ASCL3Q9NQ33 180 aa6.81□□□□□ -1.32
PDLIM5-204ENST00000380176 PCDHB16Q9NRJ7 776 aa6.81□□□□□ -1.32
PDLIM5-204ENST00000380176 SESN1Q9Y6P5 492 aa6.81□□□□□ -1.32
PDLIM5-204ENST00000380176 GTF3C1Q12789 2109 aa6.81□□□□□ -1.32
PDLIM5-204ENST00000380176 HOXD4P09016 255 aaPredicted RBP6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 HKR1P10072 659 aa6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 CA6P23280 308 aa6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 PLEKHN1Q494U1 663 aaPredicted RBP6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 ZNF585AQ6P3V2 769 aa6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 BAP18Q8IXM2 172 aa6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 TMEM178AQ8NBL3 297 aa6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 SLC30A7Q8NEW0 376 aa6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 OR5A2Q8NGI9 324 aa6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 GLYATL2Q8WU03 294 aa6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 MOB3AQ96BX8 217 aa6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 PLPPR2Q96GM1 343 aa6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 SHARPINQ9H0F6 387 aa6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 GP6Q9HCN6 339 aa6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 OR2S2Q9NQN1 319 aa6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 TAS2R3Q9NYW6 316 aa6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 MGAQ8IWI9 3026 aa6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 RHBDL1O75783 438 aa6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 TPT1P13693 172 aaKnown RBP6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 ERVS71-1P61550 626 aa6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 HERPUD1Q15011 391 aa6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 FAM76BQ5HYJ3 339 aa6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 CLEC9AQ6UXN8 241 aa6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 C20orf204Q6ZNR8 217 aa6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 GALNT14Q96FL9 552 aa6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 LSM5Q9Y4Y9 91 aaKnown RBP6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 INTS1Q8N201 2190 aaKnown RBP6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 KRBOX1C9JBD0 128 aa6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 TRAPPC2LH3BP13 241 aa6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 LYZL6O75951 148 aa6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 NAPSAO96009 420 aa6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 PPYP01298 95 aa6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 RCC1P18754 421 aaPredicted RBP6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 IGHV1-2P23083 117 aa6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 SAXO1Q8IYX7 474 aa6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 MSI2Q96DH6 328 aaKnown RBP6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 HIST1H2AAQ96QV6 131 aa6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 TP53RKQ96S44 253 aa6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 Q9N2K0 584 aa6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 ASF1BQ9NVP2 202 aa6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 RCC2Q9P258 522 aaKnown RBP6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 TUBD1Q9UJT1 453 aa6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 KCNIP3Q9Y2W7 256 aa6.8□□□□□ -1.32
PDLIM5-204ENST00000380176 ZNF292O60281 2723 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 IGKV1-6A0A0C4DH72 117 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 IGHV3-64DA0A0J9YX35 117 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 HS3ST1O14792 307 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 FGF16O43320 207 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 LRP3O75074 770 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 DEDDO75618 318 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 DIRAS3O95661 229 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 MBPP02686 304 aaPredicted RBP6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 OPN1MWP04001 364 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 FAM157CP0CG43 387 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 OPN1MW2P0DN77 364 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 OPN1MW3P0DN78 364 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 ZNF14P17017 642 aaPredicted RBP6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 GNRHRP30968 328 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 PMELP40967 661 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 ALKBH6Q3KRA9 238 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 KIAA2026Q5HYC2 2103 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 RPL7L1Q6DKI1 246 aaKnown RBP6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 TFAP2EQ6VUC0 442 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 P4HA3Q7Z4N8 544 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 MKXQ8IYA7 352 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 OR52M1Q8NGK5 317 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 NEK7Q8TDX7 302 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 C18orf12Q96KH6 178 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 IGKV1D-13A0A0B4J2D9 117 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 FAM90A10PA6NDY2 464 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 FAM90A18PA6NE21 464 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 FAM90A16PA6NEW6 464 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 FAM90A20PA6NIJ5 464 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 FAM90A8PA6NJQ4 464 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 ZNF98A6NK75 572 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 FAM90A7PA6NKC0 464 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 ANKRD30BLA7E2S9 258 aa6.79□□□□□ -1.32
PDLIM5-204ENST00000380176 FAM90A22PA8MWA6 464 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms