RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 KIR2DS4P43632 304 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 KIR2DS1Q14954 304 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 EXT1Q16394 746 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 SPINK9Q5DT21 86 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 KCNIP4Q6PIL6 250 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 SLC25A47Q6Q0C1 308 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 CISD2Q8N5K1 135 aaKnown RBP9.91□□□□□ -0.82
SMAD9-202ENST00000379826 CYB561D1Q8N8Q1 229 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 BARX1Q9HBU1 254 aaPredicted RBP9.91□□□□□ -0.82
SMAD9-202ENST00000379826 OBP2BQ9NPH6 170 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 CCL28Q9NRJ3 127 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 A0A1W2PPQ1 181 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 PPYP01298 95 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 MELTFP08582 738 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 ZDHHC23Q8IYP9 409 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 FAM210BQ96KR6 192 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 OCIAD1Q9NX40 245 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 A0A1W2PPV4 95 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 H0YL77 283 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 PDCD6O75340 191 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 METTL15P1P0C7V9 234 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 CCL3P10147 92 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 GCH1P30793 250 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 ERVS71-1P61550 626 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 ACER2Q5QJU3 275 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 ASPHD2Q6ICH7 369 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 ZNF343Q6P1L6 599 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 VHLLQ6RSH7 139 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 SMIM8Q96KF7 97 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 IL2RGP31785 369 aa9.9□□□□□ -0.82
SMAD9-202ENST00000379826 ZNF816Q0VGE8 651 aaPredicted RBP9.9□□□□□ -0.82
SMAD9-202ENST00000379826 NCR3LG1Q68D85 454 aa9.9□□□□□ -0.82
SMAD9-202ENST00000379826 KMT5CQ86Y97 462 aa9.9□□□□□ -0.82
SMAD9-202ENST00000379826 OR10AD1Q8NGE0 317 aa9.9□□□□□ -0.82
SMAD9-202ENST00000379826 LHX4Q969G2 390 aa9.9□□□□□ -0.82
SMAD9-202ENST00000379826 BSCL2Q96G97 398 aaPredicted RBP9.9□□□□□ -0.82
SMAD9-202ENST00000379826 SNX22Q96L94 193 aa9.9□□□□□ -0.82
SMAD9-202ENST00000379826 ZNF319Q9P2F9 582 aa9.9□□□□□ -0.82
SMAD9-202ENST00000379826 HSF4Q9ULV5 492 aa9.9□□□□□ -0.82
SMAD9-202ENST00000379826 OBSL1O75147 1896 aa9.9□□□□□ -0.82
SMAD9-202ENST00000379826 FKBP2P26885 142 aaKnown RBP9.9□□□□□ -0.82
SMAD9-202ENST00000379826 UBE2G2P60604 165 aa9.9□□□□□ -0.82
SMAD9-202ENST00000379826 KHDC1LQ5JSQ8 128 aa9.9□□□□□ -0.82
SMAD9-202ENST00000379826 NSUN5P2Q63ZY6 315 aa9.9□□□□□ -0.82
SMAD9-202ENST00000379826 FAM166AQ6J272 317 aa9.9□□□□□ -0.82
SMAD9-202ENST00000379826 RHBDD2Q6NTF9 364 aa9.9□□□□□ -0.82
SMAD9-202ENST00000379826 ZNF705AQ6ZN79 300 aaPredicted RBP9.9□□□□□ -0.82
SMAD9-202ENST00000379826 OR13D1Q8NGV5 346 aa9.9□□□□□ -0.82
SMAD9-202ENST00000379826 ZNF501Q96CX3 271 aaPredicted RBP9.9□□□□□ -0.82
SMAD9-202ENST00000379826 SLC7A10Q9NS82 523 aa9.9□□□□□ -0.82
SMAD9-202ENST00000379826 P4HTMQ9NXG6 502 aa9.9□□□□□ -0.82
SMAD9-202ENST00000379826 ERRFI1Q9UJM3 462 aaPredicted RBP9.9□□□□□ -0.82
SMAD9-202ENST00000379826 CEP350Q5VT06 3117 aa9.9□□□□□ -0.82
SMAD9-202ENST00000379826 NOTCH4Q99466 2003 aa9.9□□□□□ -0.82
SMAD9-202ENST00000379826 LOC390937A0A1W2PQ73 354 aa9.9□□□□□ -0.82
SMAD9-202ENST00000379826 SOX15O60248 233 aa9.9□□□□□ -0.82
SMAD9-202ENST00000379826 NXPH2O95156 264 aa9.9□□□□□ -0.82
SMAD9-202ENST00000379826 ACAA1P09110 424 aaPredicted RBP9.9□□□□□ -0.82
SMAD9-202ENST00000379826 PRDX4Q13162 271 aa9.9□□□□□ -0.82
SMAD9-202ENST00000379826 ZDHHC16Q969W1 377 aa9.9□□□□□ -0.82
SMAD9-202ENST00000379826 MEGF10Q96KG7 1140 aa9.9□□□□□ -0.82
SMAD9-202ENST00000379826 TRAV39A0A0B4J263 110 aa9.9□□□□□ -0.82
SMAD9-202ENST00000379826 HLA-DRB3P79483 266 aa9.9□□□□□ -0.82
SMAD9-202ENST00000379826 CLDN23Q96B33 292 aa9.9□□□□□ -0.82
SMAD9-202ENST00000379826 IGKV1D-8A0A087WSZ0 117 aa9.9□□□□□ -0.83
SMAD9-202ENST00000379826 PPP5D1E7EU14 171 aa9.9□□□□□ -0.83
SMAD9-202ENST00000379826 LSM6P62312 80 aaKnown RBP9.9□□□□□ -0.83
SMAD9-202ENST00000379826 FAM185AQ8N0U4 392 aa9.9□□□□□ -0.83
SMAD9-202ENST00000379826 OR1K1Q8NGR3 316 aa9.9□□□□□ -0.83
SMAD9-202ENST00000379826 SPSB2Q99619 263 aa9.9□□□□□ -0.83
SMAD9-202ENST00000379826 A0A1W2PNV4 684 aa9.89□□□□□ -0.83
SMAD9-202ENST00000379826 LDLRAD4O15165 306 aa9.89□□□□□ -0.83
SMAD9-202ENST00000379826 DANCRP0C864 163 aa9.89□□□□□ -0.83
SMAD9-202ENST00000379826 CFHR1Q03591 330 aa9.89□□□□□ -0.83
SMAD9-202ENST00000379826 TMEM187Q14656 261 aa9.89□□□□□ -0.83
SMAD9-202ENST00000379826 OR10S1Q8NGN2 331 aa9.89□□□□□ -0.83
SMAD9-202ENST00000379826 POM121Q96HA1 1249 aa9.89□□□□□ -0.83
SMAD9-202ENST00000379826 CCL21O00585 134 aa9.89□□□□□ -0.83
SMAD9-202ENST00000379826 GAPDHP04406 335 aaKnown RBP9.89□□□□□ -0.83
SMAD9-202ENST00000379826 CACNG5Q9UF02 275 aa9.89□□□□□ -0.83
SMAD9-202ENST00000379826 IGKV3D-11A0A0A0MRZ8 115 aa9.89□□□□□ -0.83
SMAD9-202ENST00000379826 B2MP61769 119 aa9.89□□□□□ -0.83
SMAD9-202ENST00000379826 CXorf66Q5JRM2 361 aaPredicted RBP9.89□□□□□ -0.83
SMAD9-202ENST00000379826 DMBX1Q8NFW5 382 aa9.89□□□□□ -0.83
SMAD9-202ENST00000379826 ATP5SQ99766 215 aa9.89□□□□□ -0.83
SMAD9-202ENST00000379826 TIMM8BQ9Y5J9 83 aaPredicted RBP9.89□□□□□ -0.83
SMAD9-202ENST00000379826 H7BYZ3 331 aa9.89□□□□□ -0.83
SMAD9-202ENST00000379826 TRGC2P03986 189 aa9.89□□□□□ -0.83
SMAD9-202ENST00000379826 CLN3Q13286 438 aa9.89□□□□□ -0.83
SMAD9-202ENST00000379826 BTNL8Q6UX41 500 aa9.89□□□□□ -0.83
SMAD9-202ENST00000379826 UCK1Q9HA47 277 aa9.89□□□□□ -0.83
SMAD9-202ENST00000379826 COA4Q9NYJ1 87 aa9.89□□□□□ -0.83
SMAD9-202ENST00000379826 TERTO14746 1132 aaKnown RBP9.88□□□□□ -0.83
SMAD9-202ENST00000379826 CBR3O75828 277 aa9.88□□□□□ -0.83
SMAD9-202ENST00000379826 LRP11Q86VZ4 500 aa9.88□□□□□ -0.83
SMAD9-202ENST00000379826 OPA3Q9H6K4 179 aa9.88□□□□□ -0.83
SMAD9-202ENST00000379826 ASCC3Q8N3C0 2202 aaKnown RBP9.88□□□□□ -0.83
SMAD9-202ENST00000379826 SNRNP200O75643 2136 aaKnown RBP9.88□□□□□ -0.83
SMAD9-202ENST00000379826 GDF9O60383 454 aa9.88□□□□□ -0.83
SMAD9-202ENST00000379826 TIAF1O95411 115 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms