RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 DUSP13Q9UII6 198 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 SLIT3O75094 1523 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 CTAG2O75638 210 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 DRD1P21728 446 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 CRYBB2P43320 205 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 NR0B2Q15466 257 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 PCGF1Q9BSM1 259 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 C1orf43Q9BWL3 253 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 TMEM8BA6NDV4 472 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 FAM219AQ8IW50 185 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 ARIH2OSQ8N7S6 290 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 ASB5Q8WWX0 329 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 IRF7Q92985 503 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 ZG16BQ96DA0 208 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 LINC00470Q9BZP3 86 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 NTMQ9P121 344 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 PGPEP1LA6NFU8 196 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 ALOX12BO75342 701 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 FGF18O76093 207 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 SNHG28P0DPA3 235 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 C10orf113Q5VZT2 155 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 BCDIN3DQ7Z5W3 292 aaKnown RBP7.79□□□□□ -1.16
LIG3-202ENST00000378526 ZPBPQ9BS86 351 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 APOBEC3BQ9UH17 382 aaKnown RBP7.79□□□□□ -1.16
LIG3-202ENST00000378526 COA3Q9Y2R0 106 aaPredicted RBP7.79□□□□□ -1.16
LIG3-202ENST00000378526 AMMECR1Q9Y4X0 333 aaPredicted RBP7.79□□□□□ -1.16
LIG3-202ENST00000378526 MARCH11A6NNE9 402 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 VDAC1P21796 283 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 ATP6V0CP27449 155 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 SELENOPP49908 381 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 MRGPRX1Q96LB2 322 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 HSD17B10Q99714 261 aaKnown RBP7.79□□□□□ -1.16
LIG3-202ENST00000378526 WDR13Q9H1Z4 485 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 DOPEY2Q9Y3R5 2298 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 ARHGAP32A7KAX9 2087 aa7.79□□□□□ -1.16
LIG3-202ENST00000378526 KHDC1LQ5JSQ8 128 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 NKAIN4Q8IVV8 208 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 KCNS1Q96KK3 526 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 OXGR1Q96P68 337 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 TSPAN32Q96QS1 320 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 IKZF4Q9H2S9 585 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 PTRH2Q9Y3E5 179 aaKnown RBP7.78□□□□□ -1.16
LIG3-202ENST00000378526 CRYAAP02489 173 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 SSR4P51571 173 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 LCN2P80188 198 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 ZNF441Q8N8Z8 693 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 OR4P4Q8NGL7 312 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 DISP1Q96F81 1524 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 C17orf51A8MQB3 221 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 S1PR2O95136 353 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 FCGR2BP31994 310 aaPredicted RBP7.78□□□□□ -1.16
LIG3-202ENST00000378526 GPR183P32249 361 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 SLC25A35Q3KQZ1 300 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 MEIG1Q5JSS6 88 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 TMEM99Q8N816 258 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 OR4D5Q8NGN0 318 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 OVOL2Q9BRP0 275 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 IL36GQ9NZH8 169 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 TNFSF18Q9UNG2 199 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 TIAM2Q8IVF5 1701 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 PAGE4O60829 102 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 KLRK1P26718 216 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 GALNSP34059 522 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 P2RY4P51582 365 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 TEPPQ6URK8 271 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 MRGPRDQ8TDS7 321 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 SCAMP4Q969E2 229 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 SMOC1Q9H4F8 434 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 TMEM272A0A1B0GTI8 110 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 IGLON5A6NGN9 336 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 DSCR3O14972 297 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 GUCA2BQ16661 112 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 OR52N5Q8NH56 324 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 FNDC4Q9H6D8 234 aaPredicted RBP7.78□□□□□ -1.16
LIG3-202ENST00000378526 IGF2P01344 180 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 SPINK8P0C7L1 97 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 NUTF2P61970 127 aaKnown RBP7.78□□□□□ -1.16
LIG3-202ENST00000378526 CCSMST1Q4G0I0 132 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 LDLRAD3Q86YD5 345 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 GALNT14Q96FL9 552 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 KIR2DL4Q99706 377 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 HINT3Q9NQE9 182 aaKnown RBP7.78□□□□□ -1.16
LIG3-202ENST00000378526 FGF21Q9NSA1 209 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 DIP2CQ9Y2E4 1556 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 PRSS37A4D1T9 235 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 FZD5Q13467 585 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 RNPS1Q15287 305 aaKnown RBP7.78□□□□□ -1.16
LIG3-202ENST00000378526 OR11H7Q8NGC8 314 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 Q96M85 177 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 RNF208Q9H0X6 261 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 CXorf36Q9H7Y0 433 aa7.78□□□□□ -1.16
LIG3-202ENST00000378526 TMEM189A5PLL7 270 aa7.77□□□□□ -1.16
LIG3-202ENST00000378526 CYBAP13498 195 aa7.77□□□□□ -1.16
LIG3-202ENST00000378526 RAC3P60763 192 aa7.77□□□□□ -1.16
LIG3-202ENST00000378526 TTC9BQ8N6N2 239 aa7.77□□□□□ -1.16
LIG3-202ENST00000378526 ABHD14BQ96IU4 210 aa7.77□□□□□ -1.16
LIG3-202ENST00000378526 ISG20L2Q9H9L3 353 aaKnown RBP7.77□□□□□ -1.16
LIG3-202ENST00000378526 COX20Q5RI15 118 aa7.77□□□□□ -1.17
LIG3-202ENST00000378526 SLC39A5Q6ZMH5 540 aa7.77□□□□□ -1.17
LIG3-202ENST00000378526 PLSCR2Q9NRY7 297 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms