RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 LYPD3O95274 346 aa11.48□□□□□ -0.57
NPHP4-203ENST00000378169 CELA3AP09093 270 aa11.48□□□□□ -0.57
NPHP4-203ENST00000378169 UBE2V2Q15819 145 aa11.48□□□□□ -0.57
NPHP4-203ENST00000378169 EIF2S3LQ2VIR3 472 aaKnown RBP11.48□□□□□ -0.57
NPHP4-203ENST00000378169 HOGA1Q86XE5 327 aa11.48□□□□□ -0.57
NPHP4-203ENST00000378169 OR11H4Q8NGC9 324 aa11.48□□□□□ -0.57
NPHP4-203ENST00000378169 PTX4Q96A99 478 aa11.48□□□□□ -0.57
NPHP4-203ENST00000378169 GAB2Q9UQC2 676 aa11.48□□□□□ -0.57
NPHP4-203ENST00000378169 TUBAL3A6NHL2 446 aa11.48□□□□□ -0.57
NPHP4-203ENST00000378169 OPN1MWP04001 364 aa11.48□□□□□ -0.57
NPHP4-203ENST00000378169 OPN1MW2P0DN77 364 aa11.48□□□□□ -0.57
NPHP4-203ENST00000378169 OPN1MW3P0DN78 364 aa11.48□□□□□ -0.57
NPHP4-203ENST00000378169 BTNL3Q6UXE8 466 aa11.48□□□□□ -0.57
NPHP4-203ENST00000378169 OR5A2Q8NGI9 324 aa11.48□□□□□ -0.57
NPHP4-203ENST00000378169 OR4F5Q8NH21 305 aa11.48□□□□□ -0.57
NPHP4-203ENST00000378169 NANPQ8TBE9 248 aa11.48□□□□□ -0.57
NPHP4-203ENST00000378169 OR4F4Q96R69 305 aa11.48□□□□□ -0.57
NPHP4-203ENST00000378169 GPHA2Q96T91 129 aa11.48□□□□□ -0.57
NPHP4-203ENST00000378169 RNASEK-C17orf49H0YIS7 233 aa11.48□□□□□ -0.57
NPHP4-203ENST00000378169 J3QT63 122 aa11.48□□□□□ -0.57
NPHP4-203ENST00000378169 MST1P26927 711 aa11.48□□□□□ -0.57
NPHP4-203ENST00000378169 TNFAIP6P98066 277 aaPredicted RBP11.48□□□□□ -0.57
NPHP4-203ENST00000378169 TMEM108Q6UXF1 575 aa11.48□□□□□ -0.57
NPHP4-203ENST00000378169 MOB1BQ7L9L4 216 aa11.48□□□□□ -0.57
NPHP4-203ENST00000378169 ZNF837Q96EG3 531 aaPredicted RBP11.48□□□□□ -0.57
NPHP4-203ENST00000378169 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.48□□□□□ -0.577e-7■■■■□ 24.4
NPHP4-203ENST00000378169 ZNF705GA8MUZ8 300 aaPredicted RBP11.47□□□□□ -0.57
NPHP4-203ENST00000378169 SSTP61278 116 aa11.47□□□□□ -0.57
NPHP4-203ENST00000378169 SURF2Q15527 256 aaPredicted RBP11.47□□□□□ -0.57
NPHP4-203ENST00000378169 RTL8BQ17RB0 113 aa11.47□□□□□ -0.57
NPHP4-203ENST00000378169 LIAT1Q6ZQX7 453 aa11.47□□□□□ -0.57
NPHP4-203ENST00000378169 NECAP1Q8NC96 275 aa11.47□□□□□ -0.57
NPHP4-203ENST00000378169 BPIFCQ8NFQ6 507 aa11.47□□□□□ -0.57
NPHP4-203ENST00000378169 POC1BQ8TC44 478 aa11.47□□□□□ -0.57
NPHP4-203ENST00000378169 TIMD4Q96H15 378 aa11.47□□□□□ -0.57
NPHP4-203ENST00000378169 PLXNA3P51805 1871 aa11.47□□□□□ -0.57
NPHP4-203ENST00000378169 NLRC5Q86WI3 1866 aa11.47□□□□□ -0.57
NPHP4-203ENST00000378169 OR2C1O95371 312 aa11.47□□□□□ -0.57
NPHP4-203ENST00000378169 MT-ND4LP03901 98 aa11.47□□□□□ -0.57
NPHP4-203ENST00000378169 LRRC75AQ8NAA5 344 aa11.47□□□□□ -0.57
NPHP4-203ENST00000378169 SIGLEC12Q96PQ1 595 aa11.47□□□□□ -0.57
NPHP4-203ENST00000378169 LAMP3Q9UQV4 416 aa11.47□□□□□ -0.57
NPHP4-203ENST00000378169 A0A0G2JMM0 328 aa11.47□□□□□ -0.57
NPHP4-203ENST00000378169 A0A1W2PPB8 328 aa11.47□□□□□ -0.57
NPHP4-203ENST00000378169 A0A1W2PRS3 328 aa11.47□□□□□ -0.57
NPHP4-203ENST00000378169 KIR3DP1A8MWS1 328 aa11.47□□□□□ -0.57
NPHP4-203ENST00000378169 TRDCB7Z8K6 153 aa11.47□□□□□ -0.57
NPHP4-203ENST00000378169 MGST1P10620 155 aaKnown RBP11.47□□□□□ -0.57
NPHP4-203ENST00000378169 CXCL2P19875 107 aa11.47□□□□□ -0.57
NPHP4-203ENST00000378169 NDUFA6P56556 154 aa11.47□□□□□ -0.57
NPHP4-203ENST00000378169 UBE2G2P60604 165 aa11.47□□□□□ -0.57
NPHP4-203ENST00000378169 PJVKQ0ZLH3 352 aa11.47□□□□□ -0.57
NPHP4-203ENST00000378169 GUK1Q16774 197 aa11.47□□□□□ -0.57
NPHP4-203ENST00000378169 IGSF11Q5DX21 431 aa11.47□□□□□ -0.57
NPHP4-203ENST00000378169 NFAM1Q8NET5 270 aaPredicted RBP11.47□□□□□ -0.57
NPHP4-203ENST00000378169 CIB3Q96Q77 187 aaPredicted RBP11.47□□□□□ -0.57
NPHP4-203ENST00000378169 DDA1Q9BW61 102 aa11.47□□□□□ -0.57
NPHP4-203ENST00000378169 ZNF107Q9UII5 783 aaPredicted RBP11.47□□□□□ -0.57
NPHP4-203ENST00000378169 MDFIC2A0A1B0GVS7 189 aa11.46□□□□□ -0.57
NPHP4-203ENST00000378169 ZNF705FA8MVS1 300 aaPredicted RBP11.46□□□□□ -0.57
NPHP4-203ENST00000378169 ZNF705DP0CH99 300 aaPredicted RBP11.46□□□□□ -0.57
NPHP4-203ENST00000378169 ZNF705BP0CI00 300 aaPredicted RBP11.46□□□□□ -0.57
NPHP4-203ENST00000378169 HNF1AP20823 631 aa11.46□□□□□ -0.57
NPHP4-203ENST00000378169 SLC26A1Q9H2B4 701 aa11.46□□□□□ -0.57
NPHP4-203ENST00000378169 C19orf12Q9NSK7 152 aa11.46□□□□□ -0.57
NPHP4-203ENST00000378169 KIAA2026Q5HYC2 2103 aa11.46□□□□□ -0.57
NPHP4-203ENST00000378169 OR7C2O60412 319 aa11.46□□□□□ -0.57
NPHP4-203ENST00000378169 RBM11P57052 281 aaKnown RBP11.46□□□□□ -0.57
NPHP4-203ENST00000378169 PDZD11Q5EBL8 140 aa11.46□□□□□ -0.57
NPHP4-203ENST00000378169 KCNIP4Q6PIL6 250 aa11.46□□□□□ -0.57
NPHP4-203ENST00000378169 MPDZO75970 2070 aa11.46□□□□□ -0.57
NPHP4-203ENST00000378169 H7BYZ3 331 aa11.46□□□□□ -0.58
NPHP4-203ENST00000378169 CFDP00746 253 aaPredicted RBP11.46□□□□□ -0.58
NPHP4-203ENST00000378169 FCGR3AP08637 254 aa11.46□□□□□ -0.58
NPHP4-203ENST00000378169 OR5G3P0C626 314 aa11.46□□□□□ -0.58
NPHP4-203ENST00000378169 COX5AP20674 150 aa11.46□□□□□ -0.58
NPHP4-203ENST00000378169 FGF7P21781 194 aa11.46□□□□□ -0.58
NPHP4-203ENST00000378169 VDAC1P21796 283 aa11.46□□□□□ -0.58
NPHP4-203ENST00000378169 IFITM2Q01629 132 aa11.46□□□□□ -0.58
NPHP4-203ENST00000378169 MRPL14Q6P1L8 145 aaKnown RBP11.46□□□□□ -0.58
NPHP4-203ENST00000378169 MOGAT3Q86VF5 341 aa11.46□□□□□ -0.58
NPHP4-203ENST00000378169 ALX4Q9H161 411 aaPredicted RBP11.46□□□□□ -0.58
NPHP4-203ENST00000378169 LEUTXA8MZ59 168 aa11.46□□□□□ -0.58
NPHP4-203ENST00000378169 CHST1O43916 411 aa11.46□□□□□ -0.58
NPHP4-203ENST00000378169 YIF1AO95070 293 aa11.46□□□□□ -0.58
NPHP4-203ENST00000378169 DTYMKP23919 212 aa11.46□□□□□ -0.58
NPHP4-203ENST00000378169 AESQ08117 197 aa11.46□□□□□ -0.58
NPHP4-203ENST00000378169 FOXO1Q12778 655 aa11.46□□□□□ -0.58
NPHP4-203ENST00000378169 KIAA0141Q14154 515 aaPredicted RBP11.46□□□□□ -0.58
NPHP4-203ENST00000378169 FDX2Q6P4F2 183 aa11.46□□□□□ -0.58
NPHP4-203ENST00000378169 FAM214BQ7L5A3 538 aa11.46□□□□□ -0.58
NPHP4-203ENST00000378169 BHLHA15Q7RTS1 189 aaPredicted RBP11.46□□□□□ -0.58
NPHP4-203ENST00000378169 SLC36A1Q7Z2H8 476 aa11.46□□□□□ -0.58
NPHP4-203ENST00000378169 UBAC2Q8NBM4 344 aa11.46□□□□□ -0.58
NPHP4-203ENST00000378169 DAZAP1Q96EP5 407 aaKnown RBP11.46□□□□□ -0.58
NPHP4-203ENST00000378169 GMPPAQ96IJ6 420 aaPredicted RBP11.46□□□□□ -0.58
NPHP4-203ENST00000378169 SLC35E1Q96K37 410 aa11.46□□□□□ -0.58
NPHP4-203ENST00000378169 LINC00052Q96N35 136 aa11.46□□□□□ -0.58
NPHP4-203ENST00000378169 SMIM7Q9BQ49 75 aa11.46□□□□□ -0.58
NPHP4-203ENST00000378169 CXXC4Q9H2H0 198 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms