RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 IGF2P01344 180 aa13.19□□□□□ -0.3
NPHP4-201ENST00000378156 CD200P41217 278 aa13.19□□□□□ -0.3
NPHP4-201ENST00000378156 ASCL1P50553 236 aa13.19□□□□□ -0.3
NPHP4-201ENST00000378156 TMEM211Q6ICI0 200 aa13.19□□□□□ -0.3
NPHP4-201ENST00000378156 SLC16A13Q7RTY0 426 aa13.19□□□□□ -0.3
NPHP4-201ENST00000378156 TMEM74BQ9NUR3 256 aa13.19□□□□□ -0.3
NPHP4-201ENST00000378156 CRYM-AS1A6NIL9 109 aa13.19□□□□□ -0.3
NPHP4-201ENST00000378156 KRASP01116 189 aa13.19□□□□□ -0.3
NPHP4-201ENST00000378156 ZNF816Q0VGE8 651 aaPredicted RBP13.19□□□□□ -0.3
NPHP4-201ENST00000378156 STPG1Q5TH74 334 aa13.19□□□□□ -0.3
NPHP4-201ENST00000378156 GPR35Q9HC97 309 aa13.19□□□□□ -0.3
NPHP4-201ENST00000378156 BET1LQ9NYM9 111 aa13.19□□□□□ -0.3
NPHP4-201ENST00000378156 PIN1P1O15428 100 aa13.19□□□□□ -0.3
NPHP4-201ENST00000378156 HLA-DRB3P79483 266 aa13.19□□□□□ -0.3
NPHP4-201ENST00000378156 LOC102723971A0A1B0GUV8 181 aa13.19□□□□□ -0.3
NPHP4-201ENST00000378156 SERTM2A0A1B0GWG4 89 aa13.19□□□□□ -0.3
NPHP4-201ENST00000378156 FAM90A27PA6NNH2 459 aa13.19□□□□□ -0.3
NPHP4-201ENST00000378156 YIF1AO95070 293 aa13.19□□□□□ -0.3
NPHP4-201ENST00000378156 IFI6P09912 130 aa13.19□□□□□ -0.3
NPHP4-201ENST00000378156 VSIG8P0DPA2 414 aa13.19□□□□□ -0.3
NPHP4-201ENST00000378156 C1QTNF12Q5T7M4 302 aa13.19□□□□□ -0.3
NPHP4-201ENST00000378156 CTHRC1Q96CG8 243 aa13.19□□□□□ -0.3
NPHP4-201ENST00000378156 SLC25A38Q96DW6 304 aa13.19□□□□□ -0.3
NPHP4-201ENST00000378156 PRDM6Q9NQX0 595 aa13.19□□□□□ -0.3
NPHP4-201ENST00000378156 LPAR3Q9UBY5 353 aa13.19□□□□□ -0.3
NPHP4-201ENST00000378156 CHD5Q8TDI0 1954 aa13.18□□□□□ -0.3
NPHP4-201ENST00000378156 A0A0J9YW62 118 aa13.18□□□□□ -0.3
NPHP4-201ENST00000378156 M0R1X1 148 aa13.18□□□□□ -0.3
NPHP4-201ENST00000378156 DXOO77932 396 aaKnown RBP13.18□□□□□ -0.3
NPHP4-201ENST00000378156 PMCHP20382 165 aa13.18□□□□□ -0.3
NPHP4-201ENST00000378156 IL11P20809 199 aa13.18□□□□□ -0.3
NPHP4-201ENST00000378156 LTBRP36941 435 aa13.18□□□□□ -0.3
NPHP4-201ENST00000378156 TMEM104Q8NE00 496 aa13.18□□□□□ -0.3
NPHP4-201ENST00000378156 ADAT3Q96EY9 351 aaPredicted RBP13.18□□□□□ -0.3
NPHP4-201ENST00000378156 ZNF385AQ96PM9 386 aaKnown RBP13.18□□□□□ -0.3
NPHP4-201ENST00000378156 PRO1933Q9H354 126 aa13.18□□□□□ -0.3
NPHP4-201ENST00000378156 MRPS18BQ9Y676 258 aaKnown RBP13.18□□□□□ -0.3
NPHP4-201ENST00000378156 ABCA7Q8IZY2 2146 aa13.18□□□□□ -0.3
NPHP4-201ENST00000378156 A0A087X0M5 115 aa13.18□□□□□ -0.3
NPHP4-201ENST00000378156 TEX50A0A1B0GTY4 177 aa13.18□□□□□ -0.3
NPHP4-201ENST00000378156 A0A1B0GX30 115 aa13.18□□□□□ -0.3
NPHP4-201ENST00000378156 GPR37O15354 613 aa13.18□□□□□ -0.3
NPHP4-201ENST00000378156 CEACAM6P40199 344 aa13.18□□□□□ -0.3
NPHP4-201ENST00000378156 ZNF154Q13106 437 aa13.18□□□□□ -0.3
NPHP4-201ENST00000378156 CEBPEQ15744 281 aa13.18□□□□□ -0.3
NPHP4-201ENST00000378156 C19orf48Q6RUI8 117 aa13.18□□□□□ -0.3
NPHP4-201ENST00000378156 LRRC29Q8WV35 223 aa13.18□□□□□ -0.3
NPHP4-201ENST00000378156 C10orf35Q96D05 121 aa13.18□□□□□ -0.3
NPHP4-201ENST00000378156 CELA2AP08217 269 aa13.18□□□□□ -0.3
NPHP4-201ENST00000378156 FA2HQ7L5A8 372 aa13.18□□□□□ -0.3
NPHP4-201ENST00000378156 OR10V1Q8NGI7 309 aa13.18□□□□□ -0.3
NPHP4-201ENST00000378156 CD1AP06126 327 aa13.18□□□□□ -0.3
NPHP4-201ENST00000378156 LIMK1P53667 647 aa13.18□□□□□ -0.3
NPHP4-201ENST00000378156 GNB2P62879 340 aa13.18□□□□□ -0.3
NPHP4-201ENST00000378156 INPP5JQ15735 1006 aaPredicted RBP13.18□□□□□ -0.3
NPHP4-201ENST00000378156 TMEM38BQ9NVV0 291 aa13.18□□□□□ -0.3
NPHP4-201ENST00000378156 ELF5Q9UKW6 265 aaPredicted RBP13.18□□□□□ -0.3
NPHP4-201ENST00000378156 VSIG10L2P0DP72 767 aa13.17□□□□□ -0.3
NPHP4-201ENST00000378156 TNFAIP6P98066 277 aaPredicted RBP13.17□□□□□ -0.3
NPHP4-201ENST00000378156 PMS2P11Q13670 270 aa13.17□□□□□ -0.3
NPHP4-201ENST00000378156 OR2H1Q9GZK4 316 aa13.17□□□□□ -0.3
NPHP4-201ENST00000378156 SLC26A1Q9H2B4 701 aa13.17□□□□□ -0.3
NPHP4-201ENST00000378156 MYOZ1Q9NP98 299 aaPredicted RBP13.17□□□□□ -0.3
NPHP4-201ENST00000378156 UBE2L5PA0A1B0GUS4 154 aa13.17□□□□□ -0.3
NPHP4-201ENST00000378156 DUXBA0A1W2PPF3 345 aa13.17□□□□□ -0.3
NPHP4-201ENST00000378156 A0A1W2PQM1 296 aa13.17□□□□□ -0.3
NPHP4-201ENST00000378156 MEX3AA1L020 520 aaKnown RBP13.17□□□□□ -0.3
NPHP4-201ENST00000378156 B4DEV8 164 aa13.17□□□□□ -0.3
NPHP4-201ENST00000378156 TMEM11P17152 192 aa13.17□□□□□ -0.3
NPHP4-201ENST00000378156 MGAT2Q10469 447 aa13.17□□□□□ -0.3
NPHP4-201ENST00000378156 NAT8BQ9UHF3 227 aa13.17□□□□□ -0.3
NPHP4-201ENST00000378156 MAP1LC3B2A6NCE7 125 aa13.17□□□□□ -0.3
NPHP4-201ENST00000378156 ERVH48-1M5A8F1 160 aa13.17□□□□□ -0.3
NPHP4-201ENST00000378156 UPK3AO75631 287 aa13.17□□□□□ -0.3
NPHP4-201ENST00000378156 COX19Q49B96 90 aa13.17□□□□□ -0.3
NPHP4-201ENST00000378156 CLEC18BQ6UXF7 455 aa13.17□□□□□ -0.3
NPHP4-201ENST00000378156 CCL17Q92583 94 aa13.17□□□□□ -0.3
NPHP4-201ENST00000378156 GPX7Q96SL4 187 aaPredicted RBP13.17□□□□□ -0.3
NPHP4-201ENST00000378156 MAP1LC3BQ9GZQ8 125 aa13.17□□□□□ -0.3
NPHP4-201ENST00000378156 KLF4O43474 513 aa13.17□□□□□ -0.3
NPHP4-201ENST00000378156 ADRA2AP08913 450 aa13.17□□□□□ -0.3
NPHP4-201ENST00000378156 ZP4Q12836 540 aa13.17□□□□□ -0.3
NPHP4-201ENST00000378156 WDR73Q6P4I2 378 aa13.17□□□□□ -0.3
NPHP4-201ENST00000378156 FAM219AQ8IW50 185 aa13.17□□□□□ -0.3
NPHP4-201ENST00000378156 OR2C3Q8N628 320 aa13.17□□□□□ -0.3
NPHP4-201ENST00000378156 Q9N2K0 584 aa13.17□□□□□ -0.3
NPHP4-201ENST00000378156 RNF24Q9Y225 148 aa13.17□□□□□ -0.3
NPHP4-201ENST00000378156 GOLT1BQ9Y3E0 138 aa13.17□□□□□ -0.3
NPHP4-201ENST00000378156 C17orf78Q8N4C9 275 aa13.16□□□□□ -0.3
NPHP4-201ENST00000378156 RPS4Y2Q8TD47 263 aa13.16□□□□□ -0.3
NPHP4-201ENST00000378156 PECRQ9BY49 303 aa13.16□□□□□ -0.3
NPHP4-201ENST00000378156 FBXL17Q9UF56 701 aa13.16□□□□□ -0.3
NPHP4-201ENST00000378156 TMEM229AB2RXF0 380 aa13.16□□□□□ -0.3
NPHP4-201ENST00000378156 ONECUT2O95948 504 aa13.16□□□□□ -0.3
NPHP4-201ENST00000378156 CRHP06850 196 aa13.16□□□□□ -0.3
NPHP4-201ENST00000378156 MDH2P40926 338 aaKnown RBP13.16□□□□□ -0.3
NPHP4-201ENST00000378156 FAM181AQ8N9Y4 354 aa13.16□□□□□ -0.3
NPHP4-201ENST00000378156 VWCEQ96DN2 955 aa13.16□□□□□ -0.3
NPHP4-201ENST00000378156 ESRP2Q9H6T0 727 aaKnown RBP13.16□□□□□ -0.3
NPHP4-201ENST00000378156 COX7A2P2O60397 106 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms