RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 TMEM218A2RU14 115 aa10.57□□□□□ -0.72
VRK3-202ENST00000377011 FAM25EA8MYX2 175 aa10.57□□□□□ -0.72
VRK3-202ENST00000377011 RPL36A-HNRNPH2H7BZ11 118 aa10.57□□□□□ -0.72
VRK3-202ENST00000377011 SOCS1O15524 211 aa10.57□□□□□ -0.72
VRK3-202ENST00000377011 NDUFS7O75251 213 aa10.57□□□□□ -0.72
VRK3-202ENST00000377011 MTRF1O75570 445 aaKnown RBP10.57□□□□□ -0.72
VRK3-202ENST00000377011 CRTAPO75718 401 aaPredicted RBP10.57□□□□□ -0.72
VRK3-202ENST00000377011 DHRS3O75911 302 aa10.57□□□□□ -0.72
VRK3-202ENST00000377011 GOSR1O95249 250 aa10.57□□□□□ -0.72
VRK3-202ENST00000377011 CD3EP07766 207 aa10.57□□□□□ -0.72
VRK3-202ENST00000377011 DANCRP0C864 163 aa10.57□□□□□ -0.72
VRK3-202ENST00000377011 AMY2BP19961 511 aa10.57□□□□□ -0.72
VRK3-202ENST00000377011 OTX1P32242 354 aaPredicted RBP10.57□□□□□ -0.72
VRK3-202ENST00000377011 CDAP32320 146 aa10.57□□□□□ -0.72
VRK3-202ENST00000377011 SLC6A9P48067 706 aa10.57□□□□□ -0.72
VRK3-202ENST00000377011 EIF5AP63241 154 aaKnown RBP10.57□□□□□ -0.72
VRK3-202ENST00000377011 ZNF672Q499Z4 452 aaPredicted RBP10.57□□□□□ -0.72
VRK3-202ENST00000377011 LRRC37A5PQ49AS3 106 aa10.57□□□□□ -0.72
VRK3-202ENST00000377011 ELP2Q6IA86 826 aa10.57□□□□□ -0.72
VRK3-202ENST00000377011 PRSS54Q6PEW0 395 aa10.57□□□□□ -0.72
VRK3-202ENST00000377011 EMG1Q92979 244 aaKnown RBP10.57□□□□□ -0.72
VRK3-202ENST00000377011 TMEM230Q96A57 120 aa10.57□□□□□ -0.72
VRK3-202ENST00000377011 MBD6Q96DN6 1003 aa10.57□□□□□ -0.72
VRK3-202ENST00000377011 MUCL1Q96DR8 90 aa10.57□□□□□ -0.72
VRK3-202ENST00000377011 CPNE2Q96FN4 548 aaPredicted RBP10.57□□□□□ -0.72
VRK3-202ENST00000377011 ZNF75AQ96N20 296 aa10.57□□□□□ -0.72
VRK3-202ENST00000377011 CHST5Q9GZS9 411 aa10.57□□□□□ -0.72
VRK3-202ENST00000377011 C5orf66Q9H5L9 145 aa10.57□□□□□ -0.72
VRK3-202ENST00000377011 ZNF319Q9P2F9 582 aa10.57□□□□□ -0.72
VRK3-202ENST00000377011 LAMP3Q9UQV4 416 aa10.57□□□□□ -0.72
VRK3-202ENST00000377011 PRELID3BQ9Y3B1 194 aa10.57□□□□□ -0.72
VRK3-202ENST00000377011 SVEP1Q4LDE5 3571 aa10.56□□□□□ -0.72
VRK3-202ENST00000377011 LOC100509620A0A075B734 347 aa10.56□□□□□ -0.72
VRK3-202ENST00000377011 IGKV1-9A0A0C4DH69 117 aa10.56□□□□□ -0.72
VRK3-202ENST00000377011 CPT2P23786 658 aa10.56□□□□□ -0.72
VRK3-202ENST00000377011 PTGFRP43088 359 aa10.56□□□□□ -0.72
VRK3-202ENST00000377011 ARFRP1Q13795 201 aa10.56□□□□□ -0.72
VRK3-202ENST00000377011 KISS1Q15726 138 aa10.56□□□□□ -0.72
VRK3-202ENST00000377011 C10orf91Q5T1B1 145 aa10.56□□□□□ -0.72
VRK3-202ENST00000377011 ATRAIDQ6UW56 229 aa10.56□□□□□ -0.72
VRK3-202ENST00000377011 DRAM2Q6UX65 266 aa10.56□□□□□ -0.72
VRK3-202ENST00000377011 SPNS3Q6ZMD2 512 aa10.56□□□□□ -0.72
VRK3-202ENST00000377011 GPR137CQ8N3F9 429 aa10.56□□□□□ -0.72
VRK3-202ENST00000377011 C1orf162Q8NEQ5 155 aaPredicted RBP10.56□□□□□ -0.72
VRK3-202ENST00000377011 RNF141Q8WVD5 230 aa10.56□□□□□ -0.72
VRK3-202ENST00000377011 DCUN1D4Q92564 292 aa10.56□□□□□ -0.72
VRK3-202ENST00000377011 PERPQ96FX8 193 aa10.56□□□□□ -0.72
VRK3-202ENST00000377011 AQP10Q96PS8 301 aa10.56□□□□□ -0.72
VRK3-202ENST00000377011 CCL19Q99731 98 aa10.56□□□□□ -0.72
VRK3-202ENST00000377011 ESRP2Q9H6T0 727 aaKnown RBP10.56□□□□□ -0.72
VRK3-202ENST00000377011 HLA-HP01893 362 aa10.55□□□□□ -0.72
VRK3-202ENST00000377011 CD79AP11912 226 aa10.55□□□□□ -0.72
VRK3-202ENST00000377011 B4GALT1P15291 398 aa10.55□□□□□ -0.72
VRK3-202ENST00000377011 HOXC12P31275 282 aa10.55□□□□□ -0.72
VRK3-202ENST00000377011 CDKN1AP38936 164 aa10.55□□□□□ -0.72
VRK3-202ENST00000377011 ZNF84P51523 738 aa10.55□□□□□ -0.72
VRK3-202ENST00000377011 ENDOGQ14249 297 aaKnown RBP10.55□□□□□ -0.72
VRK3-202ENST00000377011 FAM74A1Q5RGS3 127 aa10.55□□□□□ -0.72
VRK3-202ENST00000377011 BAP18Q8IXM2 172 aa10.55□□□□□ -0.72
VRK3-202ENST00000377011 ARL11Q969Q4 196 aa10.55□□□□□ -0.72
VRK3-202ENST00000377011 BOD1Q96IK1 185 aa10.55□□□□□ -0.72
VRK3-202ENST00000377011 ARHGAP5-AS1Q96IT6 56 aa10.55□□□□□ -0.72
VRK3-202ENST00000377011 C2orf50Q96LR7 162 aa10.55□□□□□ -0.72
VRK3-202ENST00000377011 RNF126Q9BV68 326 aa10.55□□□□□ -0.72
VRK3-202ENST00000377011 PCDHB10Q9UN67 800 aa10.55□□□□□ -0.72
VRK3-202ENST00000377011 ARFGEF3Q5TH69 2177 aa10.55□□□□□ -0.72
VRK3-202ENST00000377011 H7C2Y5 167 aa10.55□□□□□ -0.72
VRK3-202ENST00000377011 TAAR5O14804 337 aa10.55□□□□□ -0.72
VRK3-202ENST00000377011 CECR9P0C854 216 aa10.55□□□□□ -0.72
VRK3-202ENST00000377011 SLC2A1P11166 492 aa10.55□□□□□ -0.72
VRK3-202ENST00000377011 PGAM2P15259 253 aa10.55□□□□□ -0.72
VRK3-202ENST00000377011 ATXN7L3Q14CW9 347 aaPredicted RBP10.55□□□□□ -0.72
VRK3-202ENST00000377011 SGCAQ16586 387 aa10.55□□□□□ -0.72
VRK3-202ENST00000377011 IL34Q6ZMJ4 242 aa10.55□□□□□ -0.72
VRK3-202ENST00000377011 MDP1Q86V88 176 aa10.55□□□□□ -0.72
VRK3-202ENST00000377011 CIARTQ8N365 385 aaPredicted RBP10.55□□□□□ -0.72
VRK3-202ENST00000377011 C17orf78Q8N4C9 275 aa10.55□□□□□ -0.72
VRK3-202ENST00000377011 ZNF611Q8N823 705 aa10.55□□□□□ -0.72
VRK3-202ENST00000377011 OR51T1Q8NGJ9 327 aa10.55□□□□□ -0.72
VRK3-202ENST00000377011 OR13G1Q8NGZ3 307 aa10.55□□□□□ -0.72
VRK3-202ENST00000377011 SPTSSAQ969W0 71 aa10.55□□□□□ -0.72
VRK3-202ENST00000377011 NABP1Q96AH0 204 aa10.55□□□□□ -0.72
VRK3-202ENST00000377011 TSNAXQ99598 290 aaKnown RBP10.55□□□□□ -0.72
VRK3-202ENST00000377011 RTBDNQ9BSG5 229 aaPredicted RBP10.55□□□□□ -0.72
VRK3-202ENST00000377011 PECRQ9BY49 303 aa10.55□□□□□ -0.72
VRK3-202ENST00000377011 BANF2Q9H503 90 aa10.55□□□□□ -0.72
VRK3-202ENST00000377011 CISD1Q9NZ45 108 aaKnown RBP10.55□□□□□ -0.72
VRK3-202ENST00000377011 EDARQ9UNE0 448 aa10.55□□□□□ -0.72
VRK3-202ENST00000377011 CARHSP1Q9Y2V2 147 aaKnown RBP10.55□□□□□ -0.72
VRK3-202ENST00000377011 C13orf42A0A1B0GVH6 325 aa10.54□□□□□ -0.72
VRK3-202ENST00000377011 DHHO43323 396 aa10.54□□□□□ -0.72
VRK3-202ENST00000377011 NPY4RP50391 375 aa10.54□□□□□ -0.72
VRK3-202ENST00000377011 SNU13P55769 128 aaKnown RBP10.54□□□□□ -0.72
VRK3-202ENST00000377011 MRPS34P82930 218 aaKnown RBP10.54□□□□□ -0.72
VRK3-202ENST00000377011 TGFBR3Q03167 851 aa10.54□□□□□ -0.72
VRK3-202ENST00000377011 IL15RAQ13261 267 aa10.54□□□□□ -0.72
VRK3-202ENST00000377011 MSMPQ1L6U9 139 aa10.54□□□□□ -0.72
VRK3-202ENST00000377011 AADACL3Q5VUY0 350 aa10.54□□□□□ -0.72
VRK3-202ENST00000377011 EIF5AL1Q6IS14 154 aaKnown RBP10.54□□□□□ -0.72
VRK3-202ENST00000377011 CRIP3Q6Q6R5 217 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms