RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 CRYGSP22914 178 aa12.17□□□□□ -0.46
CLCNKA-202ENST00000375692 GNRHRP30968 328 aa12.17□□□□□ -0.46
CLCNKA-202ENST00000375692 DYNLT3P51808 116 aa12.17□□□□□ -0.46
CLCNKA-202ENST00000375692 SPIN3Q5JUX0 258 aa12.17□□□□□ -0.46
CLCNKA-202ENST00000375692 ODF3L1Q8IXM7 274 aa12.17□□□□□ -0.46
CLCNKA-202ENST00000375692 TMEM252Q8N6L7 170 aa12.17□□□□□ -0.46
CLCNKA-202ENST00000375692 ZNF442Q9H7R0 627 aa12.17□□□□□ -0.46
CLCNKA-202ENST00000375692 UBE2J1Q9Y385 318 aaPredicted RBP12.17□□□□□ -0.46
CLCNKA-202ENST00000375692 DMRT1Q9Y5R6 373 aa12.17□□□□□ -0.46
CLCNKA-202ENST00000375692 TRDCB7Z8K6 153 aa12.17□□□□□ -0.46
CLCNKA-202ENST00000375692 NTF4P34130 210 aa12.17□□□□□ -0.46
CLCNKA-202ENST00000375692 DUSP3P51452 185 aaPredicted RBP12.17□□□□□ -0.46
CLCNKA-202ENST00000375692 ICAM4Q14773 271 aa12.17□□□□□ -0.46
CLCNKA-202ENST00000375692 CNN3Q15417 329 aaKnown RBP12.17□□□□□ -0.46
CLCNKA-202ENST00000375692 CCDC71LQ8N9Z2 235 aa12.17□□□□□ -0.46
CLCNKA-202ENST00000375692 RARRES3Q9UL19 164 aa12.17□□□□□ -0.46
CLCNKA-202ENST00000375692 PCNX2A6NKB5 2137 aa12.16□□□□□ -0.46
CLCNKA-202ENST00000375692 TNFSF11O14788 317 aa12.16□□□□□ -0.46
CLCNKA-202ENST00000375692 ZNHIT1O43257 154 aa12.16□□□□□ -0.46
CLCNKA-202ENST00000375692 ADAM20O43506 726 aa12.16□□□□□ -0.46
CLCNKA-202ENST00000375692 OR7C1O76099 320 aaPredicted RBP12.16□□□□□ -0.46
CLCNKA-202ENST00000375692 SLC34A2O95436 690 aa12.16□□□□□ -0.46
CLCNKA-202ENST00000375692 NR2C1P13056 603 aa12.16□□□□□ -0.46
CLCNKA-202ENST00000375692 NPBWR2P48146 333 aa12.16□□□□□ -0.46
CLCNKA-202ENST00000375692 ZFP36L1Q07352 338 aaKnown RBP12.16□□□□□ -0.46
CLCNKA-202ENST00000375692 MALLQ13021 153 aa12.16□□□□□ -0.46
CLCNKA-202ENST00000375692 ZNF266Q14584 549 aa12.16□□□□□ -0.46
CLCNKA-202ENST00000375692 FAM27BQ5VT28 67 aa12.16□□□□□ -0.46
CLCNKA-202ENST00000375692 TBC1D26Q86UD7 250 aa12.16□□□□□ -0.46
CLCNKA-202ENST00000375692 ZNF695Q8IW36 515 aa12.16□□□□□ -0.46
CLCNKA-202ENST00000375692 TMEM222Q9H0R3 208 aa12.16□□□□□ -0.46
CLCNKA-202ENST00000375692 PLEKHF2Q9H8W4 249 aa12.16□□□□□ -0.46
CLCNKA-202ENST00000375692 SLC7A10Q9NS82 523 aa12.16□□□□□ -0.46
CLCNKA-202ENST00000375692 PARPBPQ9NWS1 579 aa12.16□□□□□ -0.46
CLCNKA-202ENST00000375692 FOXD3Q9UJU5 478 aaPredicted RBP12.16□□□□□ -0.46
CLCNKA-202ENST00000375692 ZNF729A6NN14 1252 aaPredicted RBP12.16□□□□□ -0.46
CLCNKA-202ENST00000375692 SYNGR3O43761 229 aa12.16□□□□□ -0.46
CLCNKA-202ENST00000375692 PITX3O75364 302 aa12.16□□□□□ -0.46
CLCNKA-202ENST00000375692 S100A2P29034 98 aa12.16□□□□□ -0.46
CLCNKA-202ENST00000375692 UCP3P55916 312 aa12.16□□□□□ -0.46
CLCNKA-202ENST00000375692 TCF15Q12870 199 aa12.16□□□□□ -0.46
CLCNKA-202ENST00000375692 DAZAP2Q15038 168 aaPredicted RBP12.16□□□□□ -0.46
CLCNKA-202ENST00000375692 ASCL4Q6XD76 172 aa12.16□□□□□ -0.46
CLCNKA-202ENST00000375692 ZNF610Q8N9Z0 462 aa12.16□□□□□ -0.46
CLCNKA-202ENST00000375692 OR10D4PQ8NGN7 298 aa12.16□□□□□ -0.46
CLCNKA-202ENST00000375692 PIGCQ92535 297 aa12.16□□□□□ -0.46
CLCNKA-202ENST00000375692 GAR1Q9NY12 217 aaKnown RBP12.16□□□□□ -0.46
CLCNKA-202ENST00000375692 ASPMQ8IZT6 3477 aa12.16□□□□□ -0.46
CLCNKA-202ENST00000375692 PRR33A8MZF0 331 aa12.15□□□□□ -0.46
CLCNKA-202ENST00000375692 CYB5BO43169 146 aa12.15□□□□□ -0.46
CLCNKA-202ENST00000375692 HIST1H2BKO60814 126 aa12.15□□□□□ -0.46
CLCNKA-202ENST00000375692 PDCD6O75340 191 aa12.15□□□□□ -0.46
CLCNKA-202ENST00000375692 SCAF4O95104 1147 aaKnown RBP12.15□□□□□ -0.46
CLCNKA-202ENST00000375692 TRGC2P03986 189 aa12.15□□□□□ -0.46
CLCNKA-202ENST00000375692 HIST1H2BJP06899 126 aa12.15□□□□□ -0.46
CLCNKA-202ENST00000375692 JMJD7P0C870 316 aa12.15□□□□□ -0.46
CLCNKA-202ENST00000375692 ZNF883P0CG24 379 aa12.15□□□□□ -0.46
CLCNKA-202ENST00000375692 CCL3P10147 92 aa12.15□□□□□ -0.46
CLCNKA-202ENST00000375692 TCN2P20062 427 aa12.15□□□□□ -0.46
CLCNKA-202ENST00000375692 HIST1H2BOP23527 126 aa12.15□□□□□ -0.46
CLCNKA-202ENST00000375692 ACP1P24666 158 aa12.15□□□□□ -0.46
CLCNKA-202ENST00000375692 HIST1H2BBP33778 126 aa12.15□□□□□ -0.46
CLCNKA-202ENST00000375692 HIST1H2BDP58876 126 aa12.15□□□□□ -0.46
CLCNKA-202ENST00000375692 HIST1H2BCP62807 126 aa12.15□□□□□ -0.46
CLCNKA-202ENST00000375692 HIST2H2BEQ16778 126 aa12.15□□□□□ -0.46
CLCNKA-202ENST00000375692 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.15□□□□□ -0.46
CLCNKA-202ENST00000375692 ZNF468Q5VIY5 522 aaPredicted RBP12.15□□□□□ -0.46
CLCNKA-202ENST00000375692 LHFPL2Q6ZUX7 228 aa12.15□□□□□ -0.46
CLCNKA-202ENST00000375692 CALHM1Q8IU99 346 aa12.15□□□□□ -0.46
CLCNKA-202ENST00000375692 SELENOHQ8IZQ5 122 aaKnown RBP12.15□□□□□ -0.46
CLCNKA-202ENST00000375692 OR1F12Q8NHA8 337 aa12.15□□□□□ -0.46
CLCNKA-202ENST00000375692 HIST1H2BHQ93079 126 aa12.15□□□□□ -0.46
CLCNKA-202ENST00000375692 HIST1H2BNQ99877 126 aa12.15□□□□□ -0.46
CLCNKA-202ENST00000375692 HIST1H2BMQ99879 126 aa12.15□□□□□ -0.46
CLCNKA-202ENST00000375692 COL25A1Q9BXS0 654 aaPredicted RBP12.15□□□□□ -0.46
CLCNKA-202ENST00000375692 SRXN1Q9BYN0 137 aa12.15□□□□□ -0.46
CLCNKA-202ENST00000375692 CRLF2Q9HC73 371 aa12.15□□□□□ -0.46
CLCNKA-202ENST00000375692 PARD6AQ9NPB6 346 aa12.15□□□□□ -0.46
CLCNKA-202ENST00000375692 WSB1Q9Y6I7 421 aa12.15□□□□□ -0.46
CLCNKA-202ENST00000375692 CNOT1A5YKK6 2376 aaKnown RBP12.15□□□□□ -0.46
CLCNKA-202ENST00000375692 A0A0J9YW62 118 aa12.15□□□□□ -0.47
CLCNKA-202ENST00000375692 WRBO00258 174 aa12.15□□□□□ -0.47
CLCNKA-202ENST00000375692 ZIC3O60481 467 aa12.15□□□□□ -0.47
CLCNKA-202ENST00000375692 CDS2O95674 445 aa12.15□□□□□ -0.47
CLCNKA-202ENST00000375692 B4GALT1P15291 398 aa12.15□□□□□ -0.47
CLCNKA-202ENST00000375692 HAAOP46952 286 aa12.15□□□□□ -0.47
CLCNKA-202ENST00000375692 VAMP2P63027 116 aa12.15□□□□□ -0.47
CLCNKA-202ENST00000375692 ZNF92Q03936 586 aa12.15□□□□□ -0.47
CLCNKA-202ENST00000375692 ZNF154Q13106 437 aa12.15□□□□□ -0.47
CLCNKA-202ENST00000375692 ZNF100Q8IYN0 542 aa12.15□□□□□ -0.47
CLCNKA-202ENST00000375692 FGFBP3Q8TAT2 258 aa12.15□□□□□ -0.47
CLCNKA-202ENST00000375692 GPR61Q9BZJ8 451 aa12.15□□□□□ -0.47
CLCNKA-202ENST00000375692 SMDT1Q9H4I9 107 aa12.15□□□□□ -0.47
CLCNKA-202ENST00000375692 LYRM2Q9NU23 88 aaPredicted RBP12.15□□□□□ -0.47
CLCNKA-202ENST00000375692 KIAA1456Q9P272 454 aa12.15□□□□□ -0.47
CLCNKA-202ENST00000375692 GATCO43716 136 aaKnown RBP12.14□□□□□ -0.47
CLCNKA-202ENST00000375692 KLK3P07288 261 aaPredicted RBP12.14□□□□□ -0.47
CLCNKA-202ENST00000375692 ZNF32P17041 273 aa12.14□□□□□ -0.47
CLCNKA-202ENST00000375692 MRPS34P82930 218 aaKnown RBP12.14□□□□□ -0.47
CLCNKA-202ENST00000375692 RAB35Q15286 201 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms