RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 TIAL1Q01085 375 aaKnown RBP eCLIP9.01□□□□□ -0.97
PTCH1-204ENST00000375290 LILRA3Q8N6C8 439 aaPredicted RBP9.01□□□□□ -0.97
PTCH1-204ENST00000375290 RELTQ969Z4 430 aa9.01□□□□□ -0.97
PTCH1-204ENST00000375290 DIRC3C9JPN6 131 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 LSM10Q969L4 123 aaKnown RBP9□□□□□ -0.97
PTCH1-204ENST00000375290 P01737 135 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 NCMAPQ5T1S8 102 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 UNQ9370/PRO34162Q6UXP9 181 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 SAXO1Q8IYX7 474 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 OR13G1Q8NGZ3 307 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 KLF7O75840 302 aaPredicted RBP9□□□□□ -0.97
PTCH1-204ENST00000375290 DIRC2Q96SL1 478 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 CCL26Q9Y258 94 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 CA3P07451 260 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 RD3LP0DJH9 198 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 PEF1Q9UBV8 284 aaKnown RBP9□□□□□ -0.97
PTCH1-204ENST00000375290 RALYQ9UKM9 306 aaKnown RBP9□□□□□ -0.97
PTCH1-204ENST00000375290 DIDO1Q9BTC0 2240 aaKnown RBP9□□□□□ -0.97
PTCH1-204ENST00000375290 SPTY2D1-AS1A0A0U1RR47 76 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 IAPPP10997 89 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 PTGER1P34995 402 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 WDFY1Q8IWB7 410 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 IMMP2LQ96T52 175 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 GGACTQ9BVM4 153 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 K7ESM1 405 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 OR1L3Q8NH93 324 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 RPH3ALQ9UNE2 315 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 SPAG17Q6Q759 2223 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 OR4A8P0C604 315 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 MPLP40238 635 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 CD226Q15762 336 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 GABRA6Q16445 453 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 TBC1D26Q86UD7 250 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 RDH5Q92781 318 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 A8MWL6 223 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 ZGLP1P0C6A0 271 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 MUC1P15941 1255 aaPredicted RBP9□□□□□ -0.97
PTCH1-204ENST00000375290 F2RP25116 425 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 SRD5A2P31213 254 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 CEACAM3P40198 252 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 MRPL38Q96DV4 380 aaKnown RBP9□□□□□ -0.97
PTCH1-204ENST00000375290 MED29Q9NX70 200 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 GPR37O15354 613 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 APCSP02743 223 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 MPZP25189 248 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 PGLYRP3Q96LB9 341 aa9□□□□□ -0.97
PTCH1-204ENST00000375290 EID2BQ96D98 161 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 TP53RKQ96S44 253 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 EMC6Q9BV81 110 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 SLC7A10Q9NS82 523 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 LRRC10Q5BKY1 277 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 RNF186Q9NXI6 227 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 CLN8Q9UBY8 286 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 ZMIZ1Q9ULJ6 1067 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 PATJQ8NI35 1801 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 EIF3GO75821 320 aaKnown RBP eCLIP8.99□□□□□ -0.97
PTCH1-204ENST00000375290 LIPFP07098 398 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 FMODQ06828 376 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 ASTLQ6HA08 431 aaPredicted RBP8.99□□□□□ -0.97
PTCH1-204ENST00000375290 TMEM251Q8N6I4 163 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 OR5A2Q8NGI9 324 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 DTD1Q8TEA8 209 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 MARS2Q96GW9 593 aaKnown RBP8.99□□□□□ -0.97
PTCH1-204ENST00000375290 GRAMD2BQ96HH9 432 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 DDA1Q9BW61 102 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 CEACAM6P40199 344 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 ERV3-1Q14264 604 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 PARM1Q6UWI2 310 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 FUT9Q9Y231 359 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 NGFP01138 241 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 ZNF296Q8WUU4 475 aaPredicted RBP8.99□□□□□ -0.97
PTCH1-204ENST00000375290 BLNKQ8WV28 456 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 NPVFQ9HCQ7 196 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 C5orf52A6NGY3 159 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 OR10G3Q8NGC4 313 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 ERRFI1Q9UJM3 462 aaPredicted RBP8.99□□□□□ -0.97
PTCH1-204ENST00000375290 A0A1W2PPC1 479 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 VWA1Q6PCB0 445 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 SMIM8Q96KF7 97 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 SRD5A3Q9H8P0 318 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 A0A1W2PPC4 97 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 hADV38S2A0JD32 116 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 FCER1GP30273 86 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 EIF4EBP2Q13542 120 aaPredicted RBP8.99□□□□□ -0.97
PTCH1-204ENST00000375290 LDLRAD3Q86YD5 345 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 SGMS2Q8NHU3 365 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 DOK4Q8TEW6 326 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 TMEM45BQ96B21 275 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 CHRNA10Q9GZZ6 450 aa8.99□□□□□ -0.97
PTCH1-204ENST00000375290 CCR2P41597 374 aa8.98□□□□□ -0.97
PTCH1-204ENST00000375290 C9orf152Q5JTZ5 239 aa8.98□□□□□ -0.97
PTCH1-204ENST00000375290 RFLNAQ6ZTI6 216 aa8.98□□□□□ -0.97
PTCH1-204ENST00000375290 ATP6V0CP27449 155 aa8.98□□□□□ -0.97
PTCH1-204ENST00000375290 FAM206AQ9NX38 181 aa8.98□□□□□ -0.97
PTCH1-204ENST00000375290 PIPOXQ9P0Z9 390 aa8.98□□□□□ -0.97
PTCH1-204ENST00000375290 PARP14Q460N5 1801 aa8.98□□□□□ -0.97
PTCH1-204ENST00000375290 GAGE10A6NGK3 116 aa8.98□□□□□ -0.97
PTCH1-204ENST00000375290 ARG1P05089 322 aa8.98□□□□□ -0.97
PTCH1-204ENST00000375290 MEGF10Q96KG7 1140 aa8.98□□□□□ -0.97
PTCH1-204ENST00000375290 DHCR7Q9UBM7 475 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms