RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 SULT1C4O75897 302 aa11.13□□□□□ -0.63
PTCH1-202ENST00000375271 IGHG2P01859 326 aa11.13□□□□□ -0.63
PTCH1-202ENST00000375271 LYL1P12980 280 aa11.13□□□□□ -0.63
PTCH1-202ENST00000375271 VDAC1P21796 283 aa11.13□□□□□ -0.63
PTCH1-202ENST00000375271 CALB2P22676 271 aa11.13□□□□□ -0.63
PTCH1-202ENST00000375271 PAN3Q58A45 887 aaKnown RBP11.13□□□□□ -0.63
PTCH1-202ENST00000375271 CASC10Q5T4H9 136 aa11.13□□□□□ -0.63
PTCH1-202ENST00000375271 FAM27D1Q5T7N8 215 aa11.13□□□□□ -0.63
PTCH1-202ENST00000375271 KIRREL1Q96J84 757 aa11.13□□□□□ -0.63
PTCH1-202ENST00000375271 RASL11BQ9BPW5 248 aa11.13□□□□□ -0.63
PTCH1-202ENST00000375271 BARHL1Q9BZE3 327 aa11.13□□□□□ -0.63
PTCH1-202ENST00000375271 COMMD4Q9H0A8 199 aa11.13□□□□□ -0.63
PTCH1-202ENST00000375271 CALYQ9NYX4 217 aa11.13□□□□□ -0.63
PTCH1-202ENST00000375271 IDI2-AS1Q9NZ38 188 aa11.13□□□□□ -0.63
PTCH1-202ENST00000375271 ENOPH1Q9UHY7 261 aa11.13□□□□□ -0.63
PTCH1-202ENST00000375271 A0A1W2PPI3 338 aa11.12□□□□□ -0.63
PTCH1-202ENST00000375271 A0A1W2PQL4 384 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-202ENST00000375271 HSD17B6O14756 317 aa11.12□□□□□ -0.63
PTCH1-202ENST00000375271 RPLP1P05386 114 aaKnown RBP11.12□□□□□ -0.63
PTCH1-202ENST00000375271 HCKP08631 526 aa11.12□□□□□ -0.63
PTCH1-202ENST00000375271 TMEM225BP0DP42 221 aa11.12□□□□□ -0.63
PTCH1-202ENST00000375271 IL3RAP26951 378 aa11.12□□□□□ -0.63
PTCH1-202ENST00000375271 GNGT1P63211 74 aa11.12□□□□□ -0.63
PTCH1-202ENST00000375271 FLOT2Q14254 428 aa11.12□□□□□ -0.63
PTCH1-202ENST00000375271 KIR2DS1Q14954 304 aa11.12□□□□□ -0.63
PTCH1-202ENST00000375271 NKAPLQ5M9Q1 402 aa11.12□□□□□ -0.63
PTCH1-202ENST00000375271 UTS2BQ765I0 119 aa11.12□□□□□ -0.63
PTCH1-202ENST00000375271 SSX6Q7RTT6 188 aa11.12□□□□□ -0.63
PTCH1-202ENST00000375271 OR13C3Q8NGS6 347 aa11.12□□□□□ -0.63
PTCH1-202ENST00000375271 LEAP2Q969E1 77 aa11.12□□□□□ -0.63
PTCH1-202ENST00000375271 FGGYQ96C11 551 aa11.12□□□□□ -0.63
PTCH1-202ENST00000375271 ADAT3Q96EY9 351 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-202ENST00000375271 NRBF2Q96F24 287 aa11.12□□□□□ -0.63
PTCH1-202ENST00000375271 RCHY1Q96PM5 261 aa11.12□□□□□ -0.63
PTCH1-202ENST00000375271 THTPAQ9BU02 230 aa11.12□□□□□ -0.63
PTCH1-202ENST00000375271 FAM118AQ9NWS6 357 aa11.12□□□□□ -0.63
PTCH1-202ENST00000375271 CHCHD3Q9NX63 227 aaKnown RBP11.12□□□□□ -0.63
PTCH1-202ENST00000375271 FAM90A18PA6NE21 464 aa11.11□□□□□ -0.63
PTCH1-202ENST00000375271 FAM90A16PA6NEW6 464 aa11.11□□□□□ -0.63
PTCH1-202ENST00000375271 FAM90A20PA6NIJ5 464 aa11.11□□□□□ -0.63
PTCH1-202ENST00000375271 FAM90A9PA6NNJ1 464 aa11.11□□□□□ -0.63
PTCH1-202ENST00000375271 FAM90A12PA8MX19 464 aa11.11□□□□□ -0.63
PTCH1-202ENST00000375271 FAM90A5PA8MXJ8 464 aa11.11□□□□□ -0.63
PTCH1-202ENST00000375271 H0YJX3 145 aa11.11□□□□□ -0.63
PTCH1-202ENST00000375271 SLC33A1O00400 549 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-202ENST00000375271 CCRL2O00421 344 aa11.11□□□□□ -0.63
PTCH1-202ENST00000375271 FKBP6O75344 327 aa11.11□□□□□ -0.63
PTCH1-202ENST00000375271 KDM4BO94953 1096 aa11.11□□□□□ -0.63
PTCH1-202ENST00000375271 APOL3O95236 402 aa11.11□□□□□ -0.63
PTCH1-202ENST00000375271 IL1AP01583 271 aa11.11□□□□□ -0.63
PTCH1-202ENST00000375271 GAPDHP04406 335 aaKnown RBP11.11□□□□□ -0.63
PTCH1-202ENST00000375271 ELANEP08246 267 aa11.11□□□□□ -0.63
PTCH1-202ENST00000375271 FAM90A15PP0C7V4 464 aa11.11□□□□□ -0.63
PTCH1-202ENST00000375271 FAM90A13PP0C7W8 464 aa11.11□□□□□ -0.63
PTCH1-202ENST00000375271 FAM90A14PP0C7W9 464 aa11.11□□□□□ -0.63
PTCH1-202ENST00000375271 FAM90A24PP0C7X0 464 aa11.11□□□□□ -0.63
PTCH1-202ENST00000375271 GPR12P47775 334 aa11.11□□□□□ -0.63
PTCH1-202ENST00000375271 CDX1P47902 265 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-202ENST00000375271 INSL3P51460 131 aa11.11□□□□□ -0.63
PTCH1-202ENST00000375271 FOXE3Q13461 319 aa11.11□□□□□ -0.63
PTCH1-202ENST00000375271 AADACL4Q5VUY2 407 aa11.11□□□□□ -0.63
PTCH1-202ENST00000375271 TGIF2LXQ8IUE1 241 aa11.11□□□□□ -0.63
PTCH1-202ENST00000375271 RDH10Q8IZV5 341 aa11.11□□□□□ -0.63
PTCH1-202ENST00000375271 OR13C9Q8NGT0 318 aa11.11□□□□□ -0.63
PTCH1-202ENST00000375271 OR2T10Q8NGZ9 312 aa11.11□□□□□ -0.63
PTCH1-202ENST00000375271 CPNE2Q96FN4 548 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-202ENST00000375271 COQ2Q96H96 371 aa11.11□□□□□ -0.63
PTCH1-202ENST00000375271 SPACA5Q96QH8 159 aa11.11□□□□□ -0.63
PTCH1-202ENST00000375271 NR1H4Q96RI1 486 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-202ENST00000375271 PPIL3Q9H2H8 161 aaKnown RBP11.11□□□□□ -0.63
PTCH1-202ENST00000375271 LIN7CQ9NUP9 197 aaKnown RBP11.11□□□□□ -0.63
PTCH1-202ENST00000375271 PSG11Q9UQ72 335 aa11.11□□□□□ -0.63
PTCH1-202ENST00000375271 OR8U8P0C7N1 319 aa11.1□□□□□ -0.63
PTCH1-202ENST00000375271 OR5H8P0DN80 308 aa11.1□□□□□ -0.63
PTCH1-202ENST00000375271 DBTP11182 482 aaKnown RBP11.1□□□□□ -0.63
PTCH1-202ENST00000375271 C17orf58Q2M2W7 97 aa11.1□□□□□ -0.63
PTCH1-202ENST00000375271 TP53I3Q53FA7 332 aa11.1□□□□□ -0.63
PTCH1-202ENST00000375271 TMEM65Q6PI78 240 aa11.1□□□□□ -0.63
PTCH1-202ENST00000375271 SAXO1Q8IYX7 474 aa11.1□□□□□ -0.63
PTCH1-202ENST00000375271 PRSS35Q8N3Z0 413 aa11.1□□□□□ -0.63
PTCH1-202ENST00000375271 MRGPRDQ8TDS7 321 aa11.1□□□□□ -0.63
PTCH1-202ENST00000375271 C4orf3Q8WVX3 66 aa11.1□□□□□ -0.63
PTCH1-202ENST00000375271 RFKQ969G6 155 aa11.1□□□□□ -0.63
PTCH1-202ENST00000375271 UTP4Q969X6 686 aaKnown RBP11.1□□□□□ -0.63
PTCH1-202ENST00000375271 KIF25Q9UIL4 384 aa11.1□□□□□ -0.63
PTCH1-202ENST00000375271 IGHV3-72A0A0B4J1Y9 119 aa11.09□□□□□ -0.63
PTCH1-202ENST00000375271 IGKV1-9A0A0C4DH69 117 aa11.09□□□□□ -0.63
PTCH1-202ENST00000375271 MAGEB3O15480 346 aa11.09□□□□□ -0.63
PTCH1-202ENST00000375271 HTR1AP08908 422 aa11.09□□□□□ -0.63
PTCH1-202ENST00000375271 HTR1FP30939 366 aa11.09□□□□□ -0.63
PTCH1-202ENST00000375271 REG1BP48304 166 aa11.09□□□□□ -0.63
PTCH1-202ENST00000375271 MTNR1BP49286 362 aa11.09□□□□□ -0.63
PTCH1-202ENST00000375271 SLC16A12Q6ZSM3 486 aa11.09□□□□□ -0.63
PTCH1-202ENST00000375271 OR11H1Q8NG94 326 aa11.09□□□□□ -0.63
PTCH1-202ENST00000375271 OR10A7Q8NGE5 316 aa11.09□□□□□ -0.63
PTCH1-202ENST00000375271 OR51T1Q8NGJ9 327 aa11.09□□□□□ -0.63
PTCH1-202ENST00000375271 OR13A1Q8NGR1 328 aa11.09□□□□□ -0.63
PTCH1-202ENST00000375271 RFESDQ8TAC1 157 aa11.09□□□□□ -0.63
PTCH1-202ENST00000375271 MRPL48Q96GC5 212 aaKnown RBP11.09□□□□□ -0.63
PTCH1-202ENST00000375271 GPER1Q99527 375 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms