RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 TEDDM1Q5T9Z0 273 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 DMKNQ6E0U4 476 aaPredicted RBP7.74□□□□□ -1.17
UBR4-201ENST00000375218 EPGNQ6UW88 154 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 PQLC2Q6ZP29 291 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 ZNF440Q8IYI8 595 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 ZADH2Q8N4Q0 377 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 OR1S2Q8NGQ3 325 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 DNAJC30Q96LL9 226 aa7.74□□□□□ -1.17
UBR4-201ENST00000375218 A0A0G2JLM5 398 aa7.73□□□□□ -1.17
UBR4-201ENST00000375218 LOC285095A0A1B0GVY8 99 aa7.73□□□□□ -1.17
UBR4-201ENST00000375218 PSPNO60542 156 aa7.73□□□□□ -1.17
UBR4-201ENST00000375218 TFPIP10646 304 aa7.73□□□□□ -1.17
UBR4-201ENST00000375218 NPY1RP25929 384 aa7.73□□□□□ -1.17
UBR4-201ENST00000375218 ZFP36L2P47974 494 aaKnown RBP7.73□□□□□ -1.17
UBR4-201ENST00000375218 IFITM3Q01628 133 aa7.73□□□□□ -1.17
UBR4-201ENST00000375218 OR1L8Q8NGR8 309 aa7.73□□□□□ -1.17
UBR4-201ENST00000375218 OXGR1Q96P68 337 aa7.73□□□□□ -1.17
UBR4-201ENST00000375218 PPIHO43447 177 aaKnown RBP7.73□□□□□ -1.17
UBR4-201ENST00000375218 CELA2BP08218 269 aaPredicted RBP7.73□□□□□ -1.17
UBR4-201ENST00000375218 FOLR1P15328 257 aa7.73□□□□□ -1.17
UBR4-201ENST00000375218 PEA15Q15121 130 aa7.73□□□□□ -1.17
UBR4-201ENST00000375218 FAM19A5Q7Z5A7 132 aaPredicted RBP7.73□□□□□ -1.17
UBR4-201ENST00000375218 TCTEX1D1Q8N7M0 179 aa7.73□□□□□ -1.17
UBR4-201ENST00000375218 ACOT4Q8N9L9 421 aa7.73□□□□□ -1.17
UBR4-201ENST00000375218 OR5R1Q8NH85 324 aa7.73□□□□□ -1.17
UBR4-201ENST00000375218 ZNF420Q8TAQ5 688 aaPredicted RBP7.73□□□□□ -1.17
UBR4-201ENST00000375218 SLC25A43Q8WUT9 341 aaPredicted RBP7.73□□□□□ -1.17
UBR4-201ENST00000375218 NUS1Q96E22 293 aa7.73□□□□□ -1.17
UBR4-201ENST00000375218 SLC35E1Q96K37 410 aa7.73□□□□□ -1.17
UBR4-201ENST00000375218 KCTD14Q9BQ13 255 aaPredicted RBP7.73□□□□□ -1.17
UBR4-201ENST00000375218 MRPL16Q9NX20 251 aaKnown RBP7.73□□□□□ -1.17
UBR4-201ENST00000375218 TRAPPC4Q9Y296 219 aa7.73□□□□□ -1.17
UBR4-201ENST00000375218 R4GN57 208 aa7.73□□□□□ -1.17
UBR4-201ENST00000375218 FAM236DA0A1B0GTK5 79 aa7.73□□□□□ -1.17
UBR4-201ENST00000375218 TMEM150CB9EJG8 249 aa7.73□□□□□ -1.17
UBR4-201ENST00000375218 FKBP6O75344 327 aa7.73□□□□□ -1.17
UBR4-201ENST00000375218 OXTP01178 125 aa7.73□□□□□ -1.17
UBR4-201ENST00000375218 FAM236CP0DP71 79 aa7.73□□□□□ -1.17
UBR4-201ENST00000375218 ADAM8P78325 824 aa7.73□□□□□ -1.17
UBR4-201ENST00000375218 TOMM20LQ6UXN7 152 aa7.73□□□□□ -1.17
UBR4-201ENST00000375218 C8orf86Q6ZUL3 223 aa7.73□□□□□ -1.17
UBR4-201ENST00000375218 FAM231DQ6ZW35 169 aa7.73□□□□□ -1.17
UBR4-201ENST00000375218 PNKDQ8N490 385 aa7.73□□□□□ -1.17
UBR4-201ENST00000375218 MCFD2Q8NI22 146 aa7.73□□□□□ -1.17
UBR4-201ENST00000375218 PPCDCQ96CD2 204 aa7.73□□□□□ -1.17
UBR4-201ENST00000375218 ASH1LQ9NR48 2969 aaKnown RBP7.73□□□□□ -1.17
UBR4-201ENST00000375218 INSIG2Q9Y5U4 225 aa7.73□□□□□ -1.17
UBR4-201ENST00000375218 ADGRG4Q8IZF6 3080 aa7.73□□□□□ -1.17
UBR4-201ENST00000375218 A0A087WX48 190 aa7.72□□□□□ -1.17
UBR4-201ENST00000375218 H3BMQ9 156 aa7.72□□□□□ -1.17
UBR4-201ENST00000375218 DVL1O14640 695 aa7.72□□□□□ -1.17
UBR4-201ENST00000375218 MMP23AO75900 390 aa7.72□□□□□ -1.17
UBR4-201ENST00000375218 DVL1P1P54792 670 aaPredicted RBP7.72□□□□□ -1.17
UBR4-201ENST00000375218 RAB38P57729 211 aa7.72□□□□□ -1.17
UBR4-201ENST00000375218 HBA1P69905 142 aa7.72□□□□□ -1.17
UBR4-201ENST00000375218 LTBQ06643 244 aa7.72□□□□□ -1.17
UBR4-201ENST00000375218 EDDM3AQ14507 147 aa7.72□□□□□ -1.17
UBR4-201ENST00000375218 OR4F17Q8NGA8 305 aa7.72□□□□□ -1.17
UBR4-201ENST00000375218 OR4F5Q8NH21 305 aa7.72□□□□□ -1.17
UBR4-201ENST00000375218 C11orf45Q8TAV5 145 aa7.72□□□□□ -1.17
UBR4-201ENST00000375218 APOBEC3DQ96AK3 386 aaPredicted RBP7.72□□□□□ -1.17
UBR4-201ENST00000375218 OR4F4Q96R69 305 aa7.72□□□□□ -1.17
UBR4-201ENST00000375218 ULBP3Q9BZM4 244 aa7.72□□□□□ -1.17
UBR4-201ENST00000375218 ANKRD20A5PA0PJZ0 165 aa7.72□□□□□ -1.17
UBR4-201ENST00000375218 YIF1AO95070 293 aa7.72□□□□□ -1.17
UBR4-201ENST00000375218 CD79AP11912 226 aa7.72□□□□□ -1.17
UBR4-201ENST00000375218 CPMP14384 443 aa7.72□□□□□ -1.17
UBR4-201ENST00000375218 ZBTB25P24278 435 aa7.72□□□□□ -1.17
UBR4-201ENST00000375218 FMODQ06828 376 aa7.72□□□□□ -1.17
UBR4-201ENST00000375218 CMC1Q7Z7K0 106 aa7.72□□□□□ -1.17
UBR4-201ENST00000375218 OAFQ86UD1 273 aa7.72□□□□□ -1.17
UBR4-201ENST00000375218 RND1Q92730 232 aa7.72□□□□□ -1.17
UBR4-201ENST00000375218 SYT3Q9BQG1 590 aa7.72□□□□□ -1.17
UBR4-201ENST00000375218 ERG28Q9UKR5 140 aa7.72□□□□□ -1.17
UBR4-201ENST00000375218 WIPI2Q9Y4P8 454 aa7.72□□□□□ -1.17
UBR4-201ENST00000375218 COPEO14579 308 aa7.72□□□□□ -1.17
UBR4-201ENST00000375218 FGF3P11487 239 aaPredicted RBP7.72□□□□□ -1.17
UBR4-201ENST00000375218 KLF5Q13887 457 aaPredicted RBP7.72□□□□□ -1.17
UBR4-201ENST00000375218 ZNF284Q2VY69 593 aa7.72□□□□□ -1.17
UBR4-201ENST00000375218 TCTE3Q8IZS6 198 aa7.72□□□□□ -1.17
UBR4-201ENST00000375218 GPR32P1Q8NGA4 272 aa7.72□□□□□ -1.17
UBR4-201ENST00000375218 CXorf21Q9HAI6 301 aa7.72□□□□□ -1.17
UBR4-201ENST00000375218 MYOCOSA0A1B0GUC4 107 aa7.71□□□□□ -1.17
UBR4-201ENST00000375218 LINC01553A4QN01 128 aa7.71□□□□□ -1.17
UBR4-201ENST00000375218 GLUD1P00367 558 aa7.71□□□□□ -1.17
UBR4-201ENST00000375218 GPX3P22352 226 aa7.71□□□□□ -1.17
UBR4-201ENST00000375218 CHATP28329 748 aa7.71□□□□□ -1.17
UBR4-201ENST00000375218 CLDN6P56747 220 aa7.71□□□□□ -1.17
UBR4-201ENST00000375218 PRSS8Q16651 343 aa7.71□□□□□ -1.17
UBR4-201ENST00000375218 PLA2G2CQ5R387 149 aa7.71□□□□□ -1.17
UBR4-201ENST00000375218 DCAF12Q5T6F0 453 aa7.71□□□□□ -1.17
UBR4-201ENST00000375218 TMEM78Q5T7P6 136 aa7.71□□□□□ -1.17
UBR4-201ENST00000375218 EEF1AKMT3Q96AZ1 226 aa7.71□□□□□ -1.17
UBR4-201ENST00000375218 PYURFQ96I23 114 aa7.71□□□□□ -1.17
UBR4-201ENST00000375218 NODALQ96S42 347 aa7.71□□□□□ -1.17
UBR4-201ENST00000375218 RNF121Q9H920 327 aa7.71□□□□□ -1.17
UBR4-201ENST00000375218 SIGLEC8Q9NYZ4 499 aa7.71□□□□□ -1.17
UBR4-201ENST00000375218 IDI2-AS1Q9NZ38 188 aa7.71□□□□□ -1.17
UBR4-201ENST00000375218 NUFIP1Q9UHK0 495 aaKnown RBP7.71□□□□□ -1.17
UBR4-201ENST00000375218 MYO10Q9HD67 2058 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms