RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 GLDNQ6ZMI3 551 aaPredicted RBP13.16□□□□□ -0.3
NIPAL3-204ENST00000374399 ZNF497Q6ZNH5 498 aa13.16□□□□□ -0.3
NIPAL3-204ENST00000374399 C17orf107Q6ZR85 190 aa13.16□□□□□ -0.3
NIPAL3-204ENST00000374399 TERB2Q8NHR7 220 aa13.16□□□□□ -0.3
NIPAL3-204ENST00000374399 NEK7Q8TDX7 302 aa13.16□□□□□ -0.3
NIPAL3-204ENST00000374399 FAM222BQ8WU58 562 aa13.16□□□□□ -0.3
NIPAL3-204ENST00000374399 SEC22CQ9BRL7 303 aa13.16□□□□□ -0.3
NIPAL3-204ENST00000374399 SHARPINQ9H0F6 387 aa13.16□□□□□ -0.3
NIPAL3-204ENST00000374399 PPA2Q9H2U2 334 aa13.16□□□□□ -0.3
NIPAL3-204ENST00000374399 TREM2Q9NZC2 230 aa13.16□□□□□ -0.3
NIPAL3-204ENST00000374399 RAI1Q7Z5J4 1906 aaPredicted RBP13.16□□□□□ -0.3
NIPAL3-204ENST00000374399 IGHV3OR15-7A0A075B7D8 119 aa13.16□□□□□ -0.3
NIPAL3-204ENST00000374399 OR5H14A6NHG9 310 aa13.16□□□□□ -0.3
NIPAL3-204ENST00000374399 VSTM5A8MXK1 200 aa13.16□□□□□ -0.3
NIPAL3-204ENST00000374399 B9A039 149 aa13.16□□□□□ -0.3
NIPAL3-204ENST00000374399 ZNF205O95201 554 aa13.16□□□□□ -0.3
NIPAL3-204ENST00000374399 CYB5R3P00387 301 aaPredicted RBP13.16□□□□□ -0.3
NIPAL3-204ENST00000374399 IFNA6P05013 189 aa13.16□□□□□ -0.3
NIPAL3-204ENST00000374399 TNFSF4P23510 183 aa13.16□□□□□ -0.3
NIPAL3-204ENST00000374399 OR3A3P47888 321 aa13.16□□□□□ -0.3
NIPAL3-204ENST00000374399 RBM39Q14498 530 aaKnown RBP13.16□□□□□ -0.3
NIPAL3-204ENST00000374399 FAM90A1Q86YD7 464 aa13.16□□□□□ -0.3
NIPAL3-204ENST00000374399 OR6F1Q8NGZ6 308 aa13.16□□□□□ -0.3
NIPAL3-204ENST00000374399 ERGIC1Q969X5 290 aa13.16□□□□□ -0.3
NIPAL3-204ENST00000374399 SEBOXQ9HB31 216 aaPredicted RBP13.16□□□□□ -0.3
NIPAL3-204ENST00000374399 ZNF286AQ9HBT8 521 aa13.16□□□□□ -0.3
NIPAL3-204ENST00000374399 WIPI2Q9Y4P8 454 aa13.16□□□□□ -0.3
NIPAL3-204ENST00000374399 DOPEY1Q5JWR5 2465 aa13.15□□□□□ -0.3
NIPAL3-204ENST00000374399 IGKV1-6A0A0C4DH72 117 aa13.15□□□□□ -0.3
NIPAL3-204ENST00000374399 BOLA2-SMG1P6H3BVE0 249 aa13.15□□□□□ -0.3
NIPAL3-204ENST00000374399 IFNL4K9M1U5 179 aa13.15□□□□□ -0.3
NIPAL3-204ENST00000374399 ZNF737O75373 536 aa13.15□□□□□ -0.3
NIPAL3-204ENST00000374399 IL5P05113 134 aa13.15□□□□□ -0.3
NIPAL3-204ENST00000374399 TRAPPC2P0DI81 140 aa13.15□□□□□ -0.3
NIPAL3-204ENST00000374399 TRAPPC2BP0DI82 140 aa13.15□□□□□ -0.3
NIPAL3-204ENST00000374399 RCC1P18754 421 aaPredicted RBP13.15□□□□□ -0.3
NIPAL3-204ENST00000374399 OR3A1P47881 315 aa13.15□□□□□ -0.3
NIPAL3-204ENST00000374399 COL10A1Q03692 680 aa13.15□□□□□ -0.3
NIPAL3-204ENST00000374399 ATXN7L3Q14CW9 347 aaPredicted RBP13.15□□□□□ -0.3
NIPAL3-204ENST00000374399 HERPUD1Q15011 391 aa13.15□□□□□ -0.3
NIPAL3-204ENST00000374399 TESK1Q15569 626 aa13.15□□□□□ -0.3
NIPAL3-204ENST00000374399 GRK1Q15835 563 aa13.15□□□□□ -0.3
NIPAL3-204ENST00000374399 FAM209AQ5JX71 171 aa13.15□□□□□ -0.3
NIPAL3-204ENST00000374399 FIP1L1Q6UN15 594 aaKnown RBP13.15□□□□□ -0.3
NIPAL3-204ENST00000374399 ZNF554Q86TJ5 538 aa13.15□□□□□ -0.3
NIPAL3-204ENST00000374399 BOLLQ8N9W6 283 aaKnown RBP13.15□□□□□ -0.3
NIPAL3-204ENST00000374399 OR52B4Q8NGK2 314 aa13.15□□□□□ -0.3
NIPAL3-204ENST00000374399 CAPSLQ8WWF8 208 aa13.15□□□□□ -0.3
NIPAL3-204ENST00000374399 HPS1Q92902 700 aa13.15□□□□□ -0.3
NIPAL3-204ENST00000374399 ST6GAL2Q96JF0 529 aa13.15□□□□□ -0.3
NIPAL3-204ENST00000374399 ALX4Q9H161 411 aaPredicted RBP13.15□□□□□ -0.3
NIPAL3-204ENST00000374399 OR51J1Q9H342 316 aa13.15□□□□□ -0.3
NIPAL3-204ENST00000374399 RIMS4Q9H426 269 aaPredicted RBP13.15□□□□□ -0.3
NIPAL3-204ENST00000374399 CHMP1AQ9HD42 196 aaPredicted RBP13.15□□□□□ -0.3
NIPAL3-204ENST00000374399 RNF7Q9UBF6 113 aa13.15□□□□□ -0.3
NIPAL3-204ENST00000374399 PRAF2O60831 178 aa13.14□□□□□ -0.31
NIPAL3-204ENST00000374399 RLN1P04808 185 aa13.14□□□□□ -0.31
NIPAL3-204ENST00000374399 SCTP09683 121 aa13.14□□□□□ -0.31
NIPAL3-204ENST00000374399 PRDX2P32119 198 aa13.14□□□□□ -0.31
NIPAL3-204ENST00000374399 CD80P33681 288 aa13.14□□□□□ -0.31
NIPAL3-204ENST00000374399 MDH2P40926 338 aaKnown RBP13.14□□□□□ -0.31
NIPAL3-204ENST00000374399 RRAS2P62070 204 aaPredicted RBP13.14□□□□□ -0.31
NIPAL3-204ENST00000374399 IGSF11Q5DX21 431 aa13.14□□□□□ -0.31
NIPAL3-204ENST00000374399 DHRS11Q6UWP2 260 aa13.14□□□□□ -0.31
NIPAL3-204ENST00000374399 PEG10Q86TG7 708 aaKnown RBP13.14□□□□□ -0.31
NIPAL3-204ENST00000374399 MUC15Q8N387 334 aa13.14□□□□□ -0.31
NIPAL3-204ENST00000374399 ANGPTL6Q8NI99 470 aa13.14□□□□□ -0.31
NIPAL3-204ENST00000374399 MARCH1Q8TCQ1 289 aa13.14□□□□□ -0.31
NIPAL3-204ENST00000374399 COQ2Q96H96 371 aa13.14□□□□□ -0.31
NIPAL3-204ENST00000374399 MYOZ1Q9NP98 299 aaPredicted RBP13.14□□□□□ -0.31
NIPAL3-204ENST00000374399 DECR2Q9NUI1 292 aa13.14□□□□□ -0.31
NIPAL3-204ENST00000374399 PPP1R3CQ9UQK1 317 aa13.14□□□□□ -0.31
NIPAL3-204ENST00000374399 NPTNQ9Y639 398 aa13.14□□□□□ -0.31
NIPAL3-204ENST00000374399 COL12A1Q99715 3063 aa13.14□□□□□ -0.31
NIPAL3-204ENST00000374399 KIAA2026Q5HYC2 2103 aa13.14□□□□□ -0.31
NIPAL3-204ENST00000374399 UBR5O95071 2799 aaPredicted RBP13.14□□□□□ -0.31
NIPAL3-204ENST00000374399 TRAV39A0A0B4J263 110 aa13.13□□□□□ -0.31
NIPAL3-204ENST00000374399 OR5H8P0DN80 308 aa13.13□□□□□ -0.31
NIPAL3-204ENST00000374399 NPY4RP50391 375 aa13.13□□□□□ -0.31
NIPAL3-204ENST00000374399 ARPC4P59998 168 aa13.13□□□□□ -0.31
NIPAL3-204ENST00000374399 AKAP14Q86UN6 197 aa13.13□□□□□ -0.31
NIPAL3-204ENST00000374399 ZDHHC22Q8N966 263 aa13.13□□□□□ -0.31
NIPAL3-204ENST00000374399 MED30Q96HR3 178 aa13.13□□□□□ -0.31
NIPAL3-204ENST00000374399 TMPRSS13Q9BYE2 586 aa13.13□□□□□ -0.31
NIPAL3-204ENST00000374399 C5orf66Q9H5L9 145 aa13.13□□□□□ -0.31
NIPAL3-204ENST00000374399 NECAP2Q9NVZ3 263 aa13.13□□□□□ -0.31
NIPAL3-204ENST00000374399 GPR132Q9UNW8 380 aa13.13□□□□□ -0.31
NIPAL3-204ENST00000374399 A8MV72 311 aaPredicted RBP13.13□□□□□ -0.31
NIPAL3-204ENST00000374399 TRDCB7Z8K6 153 aa13.13□□□□□ -0.31
NIPAL3-204ENST00000374399 TNFRSF1AP19438 455 aa13.13□□□□□ -0.31
NIPAL3-204ENST00000374399 TSPAN5P62079 268 aa13.13□□□□□ -0.31
NIPAL3-204ENST00000374399 CBX3Q13185 183 aa13.13□□□□□ -0.31
NIPAL3-204ENST00000374399 FCN2Q15485 313 aa13.13□□□□□ -0.31
NIPAL3-204ENST00000374399 STUMQ69YW2 141 aa13.13□□□□□ -0.31
NIPAL3-204ENST00000374399 ADAD2Q8NCV1 583 aaKnown RBP13.13□□□□□ -0.31
NIPAL3-204ENST00000374399 OR11H7Q8NGC8 314 aa13.13□□□□□ -0.31
NIPAL3-204ENST00000374399 PPP1R14BQ96C90 147 aa13.13□□□□□ -0.31
NIPAL3-204ENST00000374399 RTBDNQ9BSG5 229 aaPredicted RBP13.13□□□□□ -0.31
NIPAL3-204ENST00000374399 MS4A5Q9H3V2 200 aa13.13□□□□□ -0.31
NIPAL3-204ENST00000374399 MBNL3Q9NUK0 354 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms