RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 IGLC2P0DOY2 106 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 IGLC3P0DOY3 106 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 LILRA6Q6PI73 481 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 ATG4DQ86TL0 474 aaPredicted RBP8.28□□□□□ -1.08
SF3A3-201ENST00000373019 TMEFF1Q8IYR6 380 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 KCNG3Q8TAE7 436 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 CTHRC1Q96CG8 243 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 SMIM7Q9BQ49 75 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 HSPB9Q9BQS6 159 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 PHF7Q9BWX1 381 aaPredicted RBP8.28□□□□□ -1.08
SF3A3-201ENST00000373019 DAPP1Q9UN19 280 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 COL4A2P08572 1712 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 SLC16A7O60669 478 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 CST7O76096 145 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 TMEM50AO95807 157 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 IL3RAP26951 378 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 MESP2Q0VG99 397 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 GNMTQ14749 295 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 ZNF141Q15928 474 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 ARHGEF39Q8N4T4 335 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 OR4C3Q8NH37 302 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 CYB5D2Q8WUJ1 264 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 WFDC12Q8WWY7 111 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 RPUSD4Q96CM3 377 aaKnown RBP8.28□□□□□ -1.08
SF3A3-201ENST00000373019 NUS1Q96E22 293 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 TMEM59Q9BXS4 323 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 KIR3DX1Q9H7L2 352 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 NAA60Q9H7X0 242 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 RPRMQ9NS64 109 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.28□□□□□ -1.08
SF3A3-201ENST00000373019 ZNF320A2RRD8 509 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 GRIFINA4D1Z8 144 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 C17orf105B2RV13 164 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 HPNP05981 417 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 RAB28P51157 221 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 EXT1Q16394 746 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 LIAT1Q6ZQX7 453 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 FAM89BQ8N5H3 189 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 ZNF709Q8N972 641 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 APH1AQ96BI3 265 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 KLHDC3Q9BQ90 382 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 PLK3Q9H4B4 646 aa8.28□□□□□ -1.08
SF3A3-201ENST00000373019 LYRM2Q9NU23 88 aaPredicted RBP8.28□□□□□ -1.08
SF3A3-201ENST00000373019 TRAV30A0A087WSZ9 112 aa8.27□□□□□ -1.08
SF3A3-201ENST00000373019 OR6A2O95222 327 aa8.27□□□□□ -1.08
SF3A3-201ENST00000373019 TTRP02766 147 aa8.27□□□□□ -1.08
SF3A3-201ENST00000373019 CT45A8P0DMV1 189 aa8.27□□□□□ -1.08
SF3A3-201ENST00000373019 CT45A9P0DMV2 189 aa8.27□□□□□ -1.08
SF3A3-201ENST00000373019 ESDP10768 282 aa8.27□□□□□ -1.08
SF3A3-201ENST00000373019 BIDP55957 195 aa8.27□□□□□ -1.08
SF3A3-201ENST00000373019 DEFB134Q4QY38 66 aa8.27□□□□□ -1.08
SF3A3-201ENST00000373019 CT45A2Q5DJT8 189 aa8.27□□□□□ -1.08
SF3A3-201ENST00000373019 TMEM217Q8N7C4 229 aa8.27□□□□□ -1.08
SF3A3-201ENST00000373019 OR5T1Q8NG75 326 aa8.27□□□□□ -1.08
SF3A3-201ENST00000373019 RTN4IP1Q8WWV3 396 aaPredicted RBP8.27□□□□□ -1.08
SF3A3-201ENST00000373019 FAM60AQ9NP50 221 aa8.27□□□□□ -1.08
SF3A3-201ENST00000373019 ZNF701Q9NV72 531 aaPredicted RBP8.27□□□□□ -1.08
SF3A3-201ENST00000373019 TRAPPC1Q9Y5R8 145 aa8.27□□□□□ -1.08
SF3A3-201ENST00000373019 COL4A6Q14031 1691 aa8.27□□□□□ -1.09
SF3A3-201ENST00000373019 PRSS37A4D1T9 235 aa8.27□□□□□ -1.09
SF3A3-201ENST00000373019 J3QW42 95 aa8.27□□□□□ -1.09
SF3A3-201ENST00000373019 NDUFS8O00217 210 aa8.27□□□□□ -1.09
SF3A3-201ENST00000373019 CSTAP01040 98 aa8.27□□□□□ -1.09
SF3A3-201ENST00000373019 DTYMKP23919 212 aa8.27□□□□□ -1.09
SF3A3-201ENST00000373019 BMI1P35226 326 aa8.27□□□□□ -1.09
SF3A3-201ENST00000373019 TAS2R30P59541 319 aa8.27□□□□□ -1.09
SF3A3-201ENST00000373019 ZNF787Q6DD87 383 aa8.27□□□□□ -1.09
SF3A3-201ENST00000373019 LCN15Q6UWW0 184 aa8.27□□□□□ -1.09
SF3A3-201ENST00000373019 TMEM25Q86YD3 366 aa8.27□□□□□ -1.09
SF3A3-201ENST00000373019 OR5AS1Q8N127 324 aa8.27□□□□□ -1.09
SF3A3-201ENST00000373019 OR51I2Q9H344 312 aa8.27□□□□□ -1.09
SF3A3-201ENST00000373019 PLEKHF2Q9H8W4 249 aa8.27□□□□□ -1.09
SF3A3-201ENST00000373019 IL21Q9HBE4 155 aa8.27□□□□□ -1.09
SF3A3-201ENST00000373019 TUBG2Q9NRH3 451 aa8.27□□□□□ -1.09
SF3A3-201ENST00000373019 MCTS1Q9ULC4 181 aaKnown RBP8.27□□□□□ -1.09
SF3A3-201ENST00000373019 SHISA7A6NL88 538 aa8.27□□□□□ -1.09
SF3A3-201ENST00000373019 VSTM2BA6NLU5 285 aa8.27□□□□□ -1.09
SF3A3-201ENST00000373019 CEBPZOSA8MTT3 80 aa8.27□□□□□ -1.09
SF3A3-201ENST00000373019 DLL1O00548 723 aa8.27□□□□□ -1.09
SF3A3-201ENST00000373019 KBTBD11O94819 623 aa8.27□□□□□ -1.09
SF3A3-201ENST00000373019 VIPR2P41587 438 aa8.27□□□□□ -1.09
SF3A3-201ENST00000373019 ECI1P42126 302 aa8.27□□□□□ -1.09
SF3A3-201ENST00000373019 HINT1P49773 126 aaPredicted RBP8.27□□□□□ -1.09
SF3A3-201ENST00000373019 PAFAH1B2P68402 229 aa8.27□□□□□ -1.09
SF3A3-201ENST00000373019 RHOGP84095 191 aa8.27□□□□□ -1.09
SF3A3-201ENST00000373019 MRPL49Q13405 166 aaKnown RBP8.27□□□□□ -1.09
SF3A3-201ENST00000373019 SPATA45Q537H7 98 aa8.27□□□□□ -1.09
SF3A3-201ENST00000373019 SMRP1Q8NCR6 262 aa8.27□□□□□ -1.09
SF3A3-201ENST00000373019 OR52R1Q8NGF1 315 aa8.27□□□□□ -1.09
SF3A3-201ENST00000373019 OR4B1Q8NGF8 309 aa8.27□□□□□ -1.09
SF3A3-201ENST00000373019 UQCR10Q9UDW1 63 aa8.27□□□□□ -1.09
SF3A3-201ENST00000373019 OR1A2Q9Y585 309 aa8.27□□□□□ -1.09
SF3A3-201ENST00000373019 PIEZO1Q92508 2521 aa8.27□□□□□ -1.09
SF3A3-201ENST00000373019 WNT2P09544 360 aa8.26□□□□□ -1.09
SF3A3-201ENST00000373019 ADMP35318 185 aa8.26□□□□□ -1.09
SF3A3-201ENST00000373019 Q6ZN92 141 aa8.26□□□□□ -1.09
SF3A3-201ENST00000373019 OR5D14Q8NGL3 314 aa8.26□□□□□ -1.09
SF3A3-201ENST00000373019 MBD3L1Q8WWY6 194 aa8.26□□□□□ -1.09
SF3A3-201ENST00000373019 WDYHV1Q96HA8 205 aa8.26□□□□□ -1.09
SF3A3-201ENST00000373019 GPR89AB7ZAQ6 455 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms