RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 CLRN1P58418 232 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 RAP1BP61224 184 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 IGLV3-21P80748 117 aaPredicted RBP4.69□□□□□ -1.66
ATG4A-204ENST00000372246 MRPS34P82930 218 aaKnown RBP4.69□□□□□ -1.66
ATG4A-204ENST00000372246 ZFP36L1Q07352 338 aaKnown RBP4.69□□□□□ -1.66
ATG4A-204ENST00000372246 RSPO1Q2MKA7 263 aaPredicted RBP4.69□□□□□ -1.66
ATG4A-204ENST00000372246 SPIN3Q5JUX0 258 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 C9orf50Q5SZB4 431 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 C1orf185Q5T7R7 199 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 PRAMEF20Q5VT98 475 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 RTL6Q6ICC9 239 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 SLC25A24Q6NUK1 477 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 H1FNTQ75WM6 255 aaPredicted RBP4.69□□□□□ -1.66
ATG4A-204ENST00000372246 THNSL2Q86YJ6 484 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 FBXL14Q8N1E6 418 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 BADQ92934 168 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 FAM131CQ96AQ9 280 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 PGAM5Q96HS1 289 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 BOD1Q96IK1 185 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 ARV1Q9H2C2 271 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 PNRC2Q9NPJ4 139 aaKnown RBP4.69□□□□□ -1.66
ATG4A-204ENST00000372246 PPP4R1LQ9P1A2 415 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 ANXA10Q9UJ72 324 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 ANAPC10Q9UM13 185 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 NSG2Q9Y328 171 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 IGKV1-12A0A0C4DH73 117 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 TLCD2A6NGC4 264 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 FRG2CA6NGY1 282 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 FOXI3A8MTJ6 420 aaPredicted RBP4.68□□□□□ -1.66
ATG4A-204ENST00000372246 ALG1L2C9J202 215 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 IGKV1D-12P01611 117 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 CA3P07451 260 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 NTSR1P30989 418 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 GLIPR1P48060 266 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 ELLP55199 621 aaPredicted RBP4.68□□□□□ -1.66
ATG4A-204ENST00000372246 DCAF7P61962 342 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 EIF5AP63241 154 aaKnown RBP4.68□□□□□ -1.66
ATG4A-204ENST00000372246 ZNF726P1Q15940 193 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 WDR73Q6P4I2 378 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 C1QL4Q86Z23 238 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 UEVLDQ8IX04 471 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 LGI3Q8N145 548 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 OR2C3Q8N628 320 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 OR6X1Q8NH79 312 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 MSI2Q96DH6 328 aaKnown RBP4.68□□□□□ -1.66
ATG4A-204ENST00000372246 CCNL2Q96S94 520 aaPredicted RBP4.68□□□□□ -1.66
ATG4A-204ENST00000372246 C2orf88Q9BSF0 95 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 URM1Q9BTM9 101 aaKnown RBP4.68□□□□□ -1.66
ATG4A-204ENST00000372246 PBDC1Q9BVG4 233 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 DDA1Q9BW61 102 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 MRPL37Q9BZE1 423 aaKnown RBP4.68□□□□□ -1.66
ATG4A-204ENST00000372246 METTL9Q9H1A3 318 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 OPN3Q9H1Y3 402 aaPredicted RBP4.68□□□□□ -1.66
ATG4A-204ENST00000372246 C12orf49Q9H741 205 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 NAA60Q9H7X0 242 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 FSCN3Q9NQT6 498 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 LAMP3Q9UQV4 416 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 FAM186AA6NE01 2351 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 IGKV1D-13A0A0B4J2D9 117 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 TCRBV21S2A2A0A5A6 115 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 KIAA1324LA8MWY0 1029 aaPredicted RBP4.68□□□□□ -1.66
ATG4A-204ENST00000372246 ST8SIA3O43173 380 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 MBP02144 154 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 HNRNPA1P09651 372 aaKnown RBP eCLIP4.68□□□□□ -1.66
ATG4A-204ENST00000372246 IGKV1-13P0DP09 117 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 IAPPP10997 89 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 TBPP20226 339 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 ALDH3B1P43353 468 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 NPBWR2P48146 333 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 TFPI2P48307 235 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 MTCP1P56278 107 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 TAS2R46P59540 309 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 TNFRSF9Q07011 255 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 TESK1Q15569 626 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 HMGN3Q15651 99 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 ADIRFQ15847 76 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 FAM90A2PQ658T7 463 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 Q6ZVH6 145 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 GRINAQ7Z429 371 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 CMTM1Q8IZ96 169 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 D2HGDHQ8N465 521 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 TMEM252Q8N6L7 170 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 SLC38A9Q8NBW4 561 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 CLDND2Q8NHS1 167 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 DTD1Q8TEA8 209 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 FAM216AQ8WUB2 273 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 RPUSD4Q96CM3 377 aaKnown RBP4.68□□□□□ -1.66
ATG4A-204ENST00000372246 TVP23CQ96ET8 276 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 ZNF845Q96IR2 970 aaPredicted RBP4.68□□□□□ -1.66
ATG4A-204ENST00000372246 SGCZQ96LD1 299 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 NIPSNAP3BQ9BS92 247 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 PCGF1Q9BSM1 259 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 GPR87Q9BY21 358 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 MSL2Q9HCI7 577 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 MMACHCQ9Y4U1 282 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 POMT1Q9Y6A1 747 aa4.68□□□□□ -1.66
ATG4A-204ENST00000372246 CSMD1Q96PZ7 3565 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 LAMA5O15230 3695 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 A0A1W2PPQ1 181 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 XKRY2A2RUG3 117 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms