RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 A0A1W2PR48 441 aa13.59□□□□□ -0.23
COL5A1-201ENST00000371817 RBFOX2O43251 390 aaKnown RBP eCLIP13.59□□□□□ -0.23
COL5A1-201ENST00000371817 LYZP61626 148 aa13.59□□□□□ -0.23
COL5A1-201ENST00000371817 FBXL14Q8N1E6 418 aa13.59□□□□□ -0.23
COL5A1-201ENST00000371817 TMIGD3P0DMS9 266 aaPredicted RBP13.59□□□□□ -0.23
COL5A1-201ENST00000371817 GNB2P62879 340 aa13.59□□□□□ -0.23
COL5A1-201ENST00000371817 GBGT1Q8N5D6 347 aa13.59□□□□□ -0.23
COL5A1-201ENST00000371817 SHISA4Q96DD7 197 aa13.59□□□□□ -0.23
COL5A1-201ENST00000371817 IQCF3P0C7M6 154 aa13.59□□□□□ -0.23
COL5A1-201ENST00000371817 HS3ST2Q9Y278 367 aa13.59□□□□□ -0.23
COL5A1-201ENST00000371817 TLCD2A6NGC4 264 aa13.59□□□□□ -0.23
COL5A1-201ENST00000371817 LAMTOR5O43504 91 aa13.59□□□□□ -0.23
COL5A1-201ENST00000371817 MGPP08493 103 aa13.59□□□□□ -0.23
COL5A1-201ENST00000371817 NPTNQ9Y639 398 aa13.59□□□□□ -0.23
COL5A1-201ENST00000371817 CD74P04233 296 aa13.59□□□□□ -0.23
COL5A1-201ENST00000371817 CDKN2AP42771 156 aaKnown RBP13.59□□□□□ -0.23
COL5A1-201ENST00000371817 TNFRSF4P43489 277 aa13.59□□□□□ -0.23
COL5A1-201ENST00000371817 KIR2DL1P43626 348 aaPredicted RBP13.59□□□□□ -0.23
COL5A1-201ENST00000371817 KIR2DL2P43627 348 aaPredicted RBP13.59□□□□□ -0.23
COL5A1-201ENST00000371817 SLC25A1P53007 311 aa13.59□□□□□ -0.23
COL5A1-201ENST00000371817 PUSL1Q8N0Z8 303 aaKnown RBP13.59□□□□□ -0.23
COL5A1-201ENST00000371817 OR10V1Q8NGI7 309 aa13.58□□□□□ -0.23
COL5A1-201ENST00000371817 MRPL18Q9H0U6 180 aaKnown RBP13.58□□□□□ -0.23
COL5A1-201ENST00000371817 SYNGR2O43760 224 aa13.58□□□□□ -0.24
COL5A1-201ENST00000371817 DHRS3O75911 302 aa13.58□□□□□ -0.24
COL5A1-201ENST00000371817 MVDP53602 400 aa13.58□□□□□ -0.24
COL5A1-201ENST00000371817 STXBP6Q8NFX7 210 aa13.58□□□□□ -0.24
COL5A1-201ENST00000371817 ATOH1Q92858 354 aaPredicted RBP13.58□□□□□ -0.24
COL5A1-201ENST00000371817 R3HDM4Q96D70 268 aa13.58□□□□□ -0.24
COL5A1-201ENST00000371817 SIGMAR1Q99720 223 aa13.58□□□□□ -0.24
COL5A1-201ENST00000371817 AURKAIP1Q9NWT8 199 aaPredicted RBP13.58□□□□□ -0.24
COL5A1-201ENST00000371817 A0A096LPE4 126 aa13.58□□□□□ -0.24
COL5A1-201ENST00000371817 A0A1W2PPZ6 126 aa13.58□□□□□ -0.24
COL5A1-201ENST00000371817 FAM157BP0CG42 384 aa13.58□□□□□ -0.24
COL5A1-201ENST00000371817 SLC35B1P78383 322 aa13.58□□□□□ -0.24
COL5A1-201ENST00000371817 GBF1Q92538 1859 aa13.58□□□□□ -0.24
COL5A1-201ENST00000371817 PHF3Q92576 2039 aaKnown RBP13.58□□□□□ -0.24
COL5A1-201ENST00000371817 SMIM14Q96QK8 99 aa13.58□□□□□ -0.24
COL5A1-201ENST00000371817 TMEM208Q9BTX3 173 aa13.58□□□□□ -0.24
COL5A1-201ENST00000371817 A8MWL6 223 aa13.58□□□□□ -0.24
COL5A1-201ENST00000371817 C19orf67A6NJJ6 358 aa13.58□□□□□ -0.24
COL5A1-201ENST00000371817 OR10AG1Q8NH19 301 aa13.58□□□□□ -0.24
COL5A1-201ENST00000371817 MS4A6EQ96DS6 147 aa13.58□□□□□ -0.24
COL5A1-201ENST00000371817 PSMG3Q9BT73 122 aaPredicted RBP13.58□□□□□ -0.24
COL5A1-201ENST00000371817 OR10S1Q8NGN2 331 aa13.58□□□□□ -0.24
COL5A1-201ENST00000371817 GRAMD2BQ96HH9 432 aa13.58□□□□□ -0.24
COL5A1-201ENST00000371817 DMRTA2Q96SC8 542 aa13.58□□□□□ -0.24
COL5A1-201ENST00000371817 CITED2Q99967 270 aaPredicted RBP13.58□□□□□ -0.24
COL5A1-201ENST00000371817 PCGF1Q9BSM1 259 aa13.58□□□□□ -0.24
COL5A1-201ENST00000371817 GVQW1Q8N7I0 195 aa13.57□□□□□ -0.24
COL5A1-201ENST00000371817 A0A1B0GWB2 263 aa13.57□□□□□ -0.24
COL5A1-201ENST00000371817 VDAC1P21796 283 aa13.57□□□□□ -0.24
COL5A1-201ENST00000371817 KLF3P57682 345 aaPredicted RBP13.57□□□□□ -0.24
COL5A1-201ENST00000371817 TPSD1Q9BZJ3 242 aa13.57□□□□□ -0.24
COL5A1-201ENST00000371817 PKDREJQ9NTG1 2253 aa13.57□□□□□ -0.24
COL5A1-201ENST00000371817 MAST2Q6P0Q8 1798 aa13.57□□□□□ -0.24
COL5A1-201ENST00000371817 LINC01553A4QN01 128 aa13.57□□□□□ -0.24
COL5A1-201ENST00000371817 CTSDP07339 412 aaPredicted RBP13.57□□□□□ -0.24
COL5A1-201ENST00000371817 PPP1CAP62136 330 aa13.57□□□□□ -0.24
COL5A1-201ENST00000371817 LDLRAD3Q86YD5 345 aa13.57□□□□□ -0.24
COL5A1-201ENST00000371817 DAPP1Q9UN19 280 aa13.57□□□□□ -0.24
COL5A1-201ENST00000371817 CACNA1BQ00975 2339 aa13.57□□□□□ -0.24
COL5A1-201ENST00000371817 GFYI3L273 518 aa13.57□□□□□ -0.24
COL5A1-201ENST00000371817 LRRC10Q5BKY1 277 aa13.57□□□□□ -0.24
COL5A1-201ENST00000371817 WDR38Q5JTN6 314 aa13.57□□□□□ -0.24
COL5A1-201ENST00000371817 LSM10Q969L4 123 aaKnown RBP13.57□□□□□ -0.24
COL5A1-201ENST00000371817 USP3Q9Y6I4 520 aa13.57□□□□□ -0.24
COL5A1-201ENST00000371817 A0A1B0GX78 115 aa13.57□□□□□ -0.24
COL5A1-201ENST00000371817 GNG3P63215 75 aa13.57□□□□□ -0.24
COL5A1-201ENST00000371817 AGERQ15109 404 aa13.57□□□□□ -0.24
COL5A1-201ENST00000371817 DNAJC4Q9NNZ3 241 aa13.57□□□□□ -0.24
COL5A1-201ENST00000371817 MED29Q9NX70 200 aa13.57□□□□□ -0.24
COL5A1-201ENST00000371817 PIK3C2AO00443 1686 aa13.57□□□□□ -0.24
COL5A1-201ENST00000371817 MT-CO3P00414 261 aa13.57□□□□□ -0.24
COL5A1-201ENST00000371817 HOXD9P28356 352 aaPredicted RBP13.57□□□□□ -0.24
COL5A1-201ENST00000371817 CD38P28907 300 aa13.57□□□□□ -0.24
COL5A1-201ENST00000371817 DEFB108BQ8NET1 73 aa13.57□□□□□ -0.24
COL5A1-201ENST00000371817 MARVELD3Q96A59 401 aa13.57□□□□□ -0.24
COL5A1-201ENST00000371817 APOBEC3DQ96AK3 386 aaPredicted RBP13.57□□□□□ -0.24
COL5A1-201ENST00000371817 GDE1Q9NZC3 331 aa13.57□□□□□ -0.24
COL5A1-201ENST00000371817 JKAMPQ9P055 326 aa13.57□□□□□ -0.24
COL5A1-201ENST00000371817 NMBP08949 121 aa13.57□□□□□ -0.24
COL5A1-201ENST00000371817 IZUMO4Q1ZYL8 232 aa13.57□□□□□ -0.24
COL5A1-201ENST00000371817 METRNLQ641Q3 311 aa13.57□□□□□ -0.24
COL5A1-201ENST00000371817 OR4C13Q8NGP0 309 aa13.57□□□□□ -0.24
COL5A1-201ENST00000371817 NRSN2Q9GZP1 204 aa13.57□□□□□ -0.24
COL5A1-201ENST00000371817 PDCD11Q14690 1871 aaKnown RBP13.57□□□□□ -0.24
COL5A1-201ENST00000371817 PRSS2P07478 247 aa13.56□□□□□ -0.24
COL5A1-201ENST00000371817 DMRTC1Q5HYR2 192 aa13.56□□□□□ -0.24
COL5A1-201ENST00000371817 ANKRD37Q7Z713 158 aa13.56□□□□□ -0.24
COL5A1-201ENST00000371817 ZNF430Q9H8G1 570 aaPredicted RBP13.56□□□□□ -0.24
COL5A1-201ENST00000371817 TM4SF1P30408 202 aa13.56□□□□□ -0.24
COL5A1-201ENST00000371817 CKS2P33552 79 aa13.56□□□□□ -0.24
COL5A1-201ENST00000371817 OR3A4PP47883 348 aa13.56□□□□□ -0.24
COL5A1-201ENST00000371817 NOXO1Q8NFA2 376 aa13.56□□□□□ -0.24
COL5A1-201ENST00000371817 ZNF519Q8TB69 540 aa13.56□□□□□ -0.24
COL5A1-201ENST00000371817 ICOSLGO75144 302 aa13.56□□□□□ -0.24
COL5A1-201ENST00000371817 KBTBD11O94819 623 aa13.56□□□□□ -0.24
COL5A1-201ENST00000371817 FER1L6-AS2Q96M78 137 aa13.56□□□□□ -0.24
COL5A1-201ENST00000371817 WDR13Q9H1Z4 485 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms