RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 PSMB6P28072 239 aa9.35□□□□□ -0.91
PTPRK-205ENST00000368213 IGLV3-21P80748 117 aaPredicted RBP9.35□□□□□ -0.91
PTPRK-205ENST00000368213 MRPL14Q6P1L8 145 aaKnown RBP9.35□□□□□ -0.91
PTPRK-205ENST00000368213 CDH26Q8IXH8 852 aa9.35□□□□□ -0.91
PTPRK-205ENST00000368213 ZPLD1Q8TCW7 415 aa9.35□□□□□ -0.91
PTPRK-205ENST00000368213 SIRT7Q9NRC8 400 aa9.35□□□□□ -0.91
PTPRK-205ENST00000368213 CA11O75493 328 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 BSPH1Q075Z2 132 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 SOHLH1Q5JUK2 328 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 SLC25A42Q86VD7 318 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 APCDD1LQ8NCL9 501 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 KLF14Q8TD94 323 aaPredicted RBP9.34□□□□□ -0.91
PTPRK-205ENST00000368213 ZNF552Q9H707 407 aaPredicted RBP9.34□□□□□ -0.91
PTPRK-205ENST00000368213 DUS4LO95620 317 aaKnown RBP9.34□□□□□ -0.91
PTPRK-205ENST00000368213 RECKO95980 971 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 CEACAM21Q3KPI0 293 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 PIGYQ3MUY2 71 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 PRR27Q6MZM9 219 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 SSX7Q7RTT5 188 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 CCDC28AQ8IWP9 274 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 GHITMQ9H3K2 345 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 GP6Q9HCN6 339 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 CHCHD2Q9Y6H1 151 aaPredicted RBP9.34□□□□□ -0.91
PTPRK-205ENST00000368213 CHEK1O14757 476 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 JTBO76095 146 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 P2RX3P56373 397 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 USF2Q15853 346 aaPredicted RBP9.34□□□□□ -0.91
PTPRK-205ENST00000368213 ZNF826PQ6ZT77 177 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 CENPVQ7Z7K6 275 aaPredicted RBP9.34□□□□□ -0.91
PTPRK-205ENST00000368213 OR5H6Q8NGV6 325 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 TMEM165Q9HC07 324 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 ZNF331Q9NQX6 463 aaPredicted RBP9.34□□□□□ -0.91
PTPRK-205ENST00000368213 PLSCR3Q9NRY6 295 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 FRRS1LQ9P0K9 344 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 CACNG5Q9UF02 275 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 SEC16AO15027 2179 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 HTN1P15515 57 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 ORM2P19652 201 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 CD40P25942 277 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 TGFBR1P36897 503 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 ETV3LQ6ZN32 361 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 DUSP18Q8NEJ0 188 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 OR10A7Q8NGE5 316 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 NIPSNAP3BQ9BS92 247 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 DOK5Q9P104 306 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 FLVCR2Q9UPI3 526 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 LSM2Q9Y333 95 aaKnown RBP9.34□□□□□ -0.91
PTPRK-205ENST00000368213 LEUTXA8MZ59 168 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 IGKV3-11P04433 115 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 SLC25A4P12235 298 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 CNN1P51911 297 aaKnown RBP9.34□□□□□ -0.91
PTPRK-205ENST00000368213 BTG1P62324 171 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 TPRX1Q8N7U7 411 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 POM121Q96HA1 1249 aa9.34□□□□□ -0.91
PTPRK-205ENST00000368213 C1orf196B1AJZ1 125 aa9.33□□□□□ -0.92
PTPRK-205ENST00000368213 E9PLN8 166 aa9.33□□□□□ -0.92
PTPRK-205ENST00000368213 ZG16O60844 167 aa9.33□□□□□ -0.92
PTPRK-205ENST00000368213 HLA-DRB3P79483 266 aa9.33□□□□□ -0.92
PTPRK-205ENST00000368213 RIPPLY2Q5TAB7 128 aa9.33□□□□□ -0.92
PTPRK-205ENST00000368213 RPL7L1Q6DKI1 246 aaKnown RBP9.33□□□□□ -0.92
PTPRK-205ENST00000368213 RBPMS2Q6ZRY4 209 aaKnown RBP9.33□□□□□ -0.92
PTPRK-205ENST00000368213 SLC51BQ86UW2 128 aa9.33□□□□□ -0.92
PTPRK-205ENST00000368213 BCL2L2Q92843 193 aaPredicted RBP9.33□□□□□ -0.92
PTPRK-205ENST00000368213 VKORC1Q9BQB6 163 aa9.33□□□□□ -0.92
PTPRK-205ENST00000368213 UQCC1Q9NVA1 299 aa9.33□□□□□ -0.92
PTPRK-205ENST00000368213 IFI6P09912 130 aa9.33□□□□□ -0.92
PTPRK-205ENST00000368213 S100A11P31949 105 aa9.33□□□□□ -0.92
PTPRK-205ENST00000368213 OR5B3Q8NH48 314 aa9.33□□□□□ -0.92
PTPRK-205ENST00000368213 Q8WTZ3 238 aa9.33□□□□□ -0.92
PTPRK-205ENST00000368213 YIPF5Q969M3 257 aa9.33□□□□□ -0.92
PTPRK-205ENST00000368213 IMMP1LQ96LU5 166 aa9.33□□□□□ -0.92
PTPRK-205ENST00000368213 DCTN6O00399 190 aa9.33□□□□□ -0.92
PTPRK-205ENST00000368213 CTAG2O75638 210 aa9.33□□□□□ -0.92
PTPRK-205ENST00000368213 CST7O76096 145 aa9.33□□□□□ -0.92
PTPRK-205ENST00000368213 RPS4Y1P22090 263 aaKnown RBP9.33□□□□□ -0.92
PTPRK-205ENST00000368213 SUCLG1P53597 346 aaKnown RBP9.33□□□□□ -0.92
PTPRK-205ENST00000368213 INSL4Q14641 139 aa9.33□□□□□ -0.92
PTPRK-205ENST00000368213 OR5AP2Q8NGF4 316 aa9.33□□□□□ -0.92
PTPRK-205ENST00000368213 SMIM4Q8WVI0 70 aa9.33□□□□□ -0.92
PTPRK-205ENST00000368213 BIN3Q9NQY0 253 aa9.33□□□□□ -0.92
PTPRK-205ENST00000368213 SCN5AQ14524 2016 aa9.33□□□□□ -0.92
PTPRK-205ENST00000368213 MYOFQ9NZM1 2061 aa9.33□□□□□ -0.92
PTPRK-205ENST00000368213 SNAPINO95295 136 aa9.33□□□□□ -0.92
PTPRK-205ENST00000368213 WISP3O95389 354 aaPredicted RBP9.33□□□□□ -0.92
PTPRK-205ENST00000368213 LFNGQ8NES3 379 aa9.33□□□□□ -0.92
PTPRK-205ENST00000368213 OR1B1Q8NGR6 318 aa9.33□□□□□ -0.92
PTPRK-205ENST00000368213 TMED3Q9Y3Q3 217 aa9.33□□□□□ -0.92
PTPRK-205ENST00000368213 IGHV3-72A0A0B4J1Y9 119 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 A0A0G2JMM0 328 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 A0A1W2PPB8 328 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 A0A1W2PRS3 328 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 ZNF705FA8MVS1 300 aaPredicted RBP9.32□□□□□ -0.92
PTPRK-205ENST00000368213 KIR3DP1A8MWS1 328 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 LIPFP07098 398 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 ZNF705DP0CH99 300 aaPredicted RBP9.32□□□□□ -0.92
PTPRK-205ENST00000368213 ZNF705BP0CI00 300 aaPredicted RBP9.32□□□□□ -0.92
PTPRK-205ENST00000368213 CDKN1AP38936 164 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 ZXDCQ2QGD7 858 aaPredicted RBP9.32□□□□□ -0.92
PTPRK-205ENST00000368213 SLC25A47Q6Q0C1 308 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 KCNRGQ8N5I3 272 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms