RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 Q6ZPB1 254 aaPredicted RBP7.67□□□□□ -1.18
SYNE1-206ENST00000367253 HSD17B13Q7Z5P4 300 aaPredicted RBP7.67□□□□□ -1.18
SYNE1-206ENST00000367253 ZNF485Q8NCK3 441 aa7.67□□□□□ -1.18
SYNE1-206ENST00000367253 PINX1Q96BK5 328 aaKnown RBP7.67□□□□□ -1.18
SYNE1-206ENST00000367253 LHX3Q9UBR4 397 aa7.67□□□□□ -1.18
SYNE1-206ENST00000367253 GUSBP08236 651 aa7.67□□□□□ -1.18
SYNE1-206ENST00000367253 POLR2IP36954 125 aaKnown RBP7.67□□□□□ -1.18
SYNE1-206ENST00000367253 PRICKLE4Q2TBC4 344 aa7.67□□□□□ -1.18
SYNE1-206ENST00000367253 ZFAND6Q6FIF0 208 aa7.67□□□□□ -1.18
SYNE1-206ENST00000367253 ZNF429Q86V71 674 aa7.67□□□□□ -1.18
SYNE1-206ENST00000367253 WDR34Q96EX3 536 aa7.67□□□□□ -1.18
SYNE1-206ENST00000367253 LAT2Q9GZY6 243 aa7.67□□□□□ -1.18
SYNE1-206ENST00000367253 HTR1DP28221 377 aa7.67□□□□□ -1.18
SYNE1-206ENST00000367253 CD96P40200 585 aa7.67□□□□□ -1.18
SYNE1-206ENST00000367253 DAPP51397 102 aa7.67□□□□□ -1.18
SYNE1-206ENST00000367253 XKR7Q5GH72 579 aa7.67□□□□□ -1.18
SYNE1-206ENST00000367253 TFAP2EQ6VUC0 442 aa7.67□□□□□ -1.18
SYNE1-206ENST00000367253 OR52M1Q8NGK5 317 aa7.67□□□□□ -1.18
SYNE1-206ENST00000367253 NEIL2Q969S2 332 aa7.67□□□□□ -1.18
SYNE1-206ENST00000367253 DOK1Q99704 481 aa7.67□□□□□ -1.18
SYNE1-206ENST00000367253 ZNF426Q9BUY5 554 aa7.67□□□□□ -1.18
SYNE1-206ENST00000367253 HAPLN2Q9GZV7 340 aa7.67□□□□□ -1.18
SYNE1-206ENST00000367253 RAB33BQ9H082 229 aa7.67□□□□□ -1.18
SYNE1-206ENST00000367253 TMEM191AQ9H0A3 160 aa7.67□□□□□ -1.18
SYNE1-206ENST00000367253 OCIAD1Q9NX40 245 aa7.67□□□□□ -1.18
SYNE1-206ENST00000367253 A0A1W2PS18 150 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 FAM24AA6NFZ4 105 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 NKX2-8O15522 239 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 HKR1P10072 659 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 SPINK2P20155 84 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 DUSP8Q13202 625 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 FAM106AQ4KMX7 169 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 SAXO2Q658L1 398 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 MFSD12Q6NUT3 480 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 MARCH3Q86UD3 253 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 SPACA3Q8IXA5 215 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 MRGPRDQ8TDS7 321 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 ICE1Q9Y2F5 2266 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 A0A1B0GTH9 108 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 HMGA1P17096 107 aaKnown RBP7.66□□□□□ -1.18
SYNE1-206ENST00000367253 ZNF85Q03923 595 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 MRPL54Q6P161 138 aaKnown RBP7.66□□□□□ -1.18
SYNE1-206ENST00000367253 RNF165Q6ZSG1 346 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 ZDHHC23Q8IYP9 409 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 SLC38A9Q8NBW4 561 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 OR1L6Q8NGR2 347 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 DDB2Q92466 427 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 ACER3Q9NUN7 267 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 NAT8BQ9UHF3 227 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 OR5B21A6NL26 309 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 ZNF93P35789 620 aaPredicted RBP7.66□□□□□ -1.18
SYNE1-206ENST00000367253 TNFSF10P50591 281 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 PDCD1Q15116 288 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 GLYATL3Q5SZD4 288 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 PRSS45Q7RTY3 260 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 MRPL55Q7Z7F7 128 aaKnown RBP7.66□□□□□ -1.18
SYNE1-206ENST00000367253 BVESQ8NE79 360 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 OR52I2Q8NH67 350 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 VSTM2AQ8TAG5 236 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 ZNF391Q9UJN7 358 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 ABCA4P78363 2273 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 A0A087WV62 115 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 LOC107984156A0A0G2JMH3 177 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 TMEM189A5PLL7 270 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 NXPH3O95157 252 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 HTR1FP30939 366 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 C1QL3Q5VWW1 255 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 CGB2Q6NT52 195 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 FAM71F2Q6NXP2 309 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 EBLN2Q6P2I7 272 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 LILRA6Q6PI73 481 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 INO80CQ6PI98 192 aaPredicted RBP7.66□□□□□ -1.18
SYNE1-206ENST00000367253 H2BFWTQ7Z2G1 175 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 ARL17AQ8IVW1 177 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 OR10P1Q8NGE3 313 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 RCC1LQ96I51 464 aaKnown RBP7.66□□□□□ -1.18
SYNE1-206ENST00000367253 SLC17A4Q9Y2C5 497 aa7.66□□□□□ -1.18
SYNE1-206ENST00000367253 FRG2CA6NGY1 282 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 B5MCH6 92 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 C22orf46C9J442 243 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 GCGP01275 180 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 SMIM18P0DKX4 95 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 SLC25A4P12235 298 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 ACHEP22303 614 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 ERVFC1-1P60608 527 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 PJVKQ0ZLH3 352 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 ELOBQ15370 118 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 TMEM45BQ96B21 275 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 AAMDCQ9H7C9 122 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 ZMAT3Q9HA38 289 aaKnown RBP7.65□□□□□ -1.18
SYNE1-206ENST00000367253 EVPLQ92817 2033 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 SIPA1L1O43166 1804 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 TRAV8-7A0A075B6U6 113 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 A0A096LPE4 126 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 A0A1W2PPZ6 126 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 LINC00862A6NCI5 91 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 CRXO43186 299 aaPredicted RBP7.65□□□□□ -1.18
SYNE1-206ENST00000367253 DHHO43323 396 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 GASTP01350 101 aa7.65□□□□□ -1.18
SYNE1-206ENST00000367253 ADRA2AP08913 450 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms