RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 RASL11BQ9BPW5 248 aa16.24■□□□□ 0.19
CLIP2-202ENST00000361545 PPIAL4AQ9Y536 164 aa16.24■□□□□ 0.19
CLIP2-202ENST00000361545 INSIG2Q9Y5U4 225 aa16.24■□□□□ 0.19
CLIP2-202ENST00000361545 TO15178 435 aa16.23■□□□□ 0.19
CLIP2-202ENST00000361545 UCP2P55851 309 aa16.23■□□□□ 0.19
CLIP2-202ENST00000361545 PCOLCEQ15113 449 aa16.23■□□□□ 0.19
CLIP2-202ENST00000361545 SCARF2Q96GP6 870 aaPredicted RBP16.23■□□□□ 0.19
CLIP2-202ENST00000361545 SPSB2Q99619 263 aa16.23■□□□□ 0.19
CLIP2-202ENST00000361545 CLEC5AQ9NY25 188 aa16.23■□□□□ 0.19
CLIP2-202ENST00000361545 ZNF320A2RRD8 509 aa16.23■□□□□ 0.19
CLIP2-202ENST00000361545 DNASE2O00115 360 aaPredicted RBP16.23■□□□□ 0.19
CLIP2-202ENST00000361545 LGALS7P47929 136 aa16.23■□□□□ 0.19
CLIP2-202ENST00000361545 ZP4Q12836 540 aa16.23■□□□□ 0.19
CLIP2-202ENST00000361545 GGTLC2Q14390 218 aa16.23■□□□□ 0.19
CLIP2-202ENST00000361545 VWCEQ96DN2 955 aa16.23■□□□□ 0.19
CLIP2-202ENST00000361545 OR51I2Q9H344 312 aa16.23■□□□□ 0.19
CLIP2-202ENST00000361545 LRRC3CA6NJW4 275 aa16.23■□□□□ 0.19
CLIP2-202ENST00000361545 SKA3Q8IX90 412 aa16.23■□□□□ 0.19
CLIP2-202ENST00000361545 PLSCR3Q9NRY6 295 aa16.23■□□□□ 0.19
CLIP2-202ENST00000361545 A0A1W2PPE3 182 aa16.23■□□□□ 0.19
CLIP2-202ENST00000361545 SLC31A2O15432 143 aa16.23■□□□□ 0.19
CLIP2-202ENST00000361545 SCO1O75880 301 aa16.23■□□□□ 0.19
CLIP2-202ENST00000361545 BLNKQ8WV28 456 aa16.23■□□□□ 0.19
CLIP2-202ENST00000361545 ZCCHC14Q8WYQ9 949 aaKnown RBP16.23■□□□□ 0.19
CLIP2-202ENST00000361545 CTDSP1Q9GZU7 261 aa16.23■□□□□ 0.19
CLIP2-202ENST00000361545 APELAP0DMC3 54 aa16.22■□□□□ 0.19
CLIP2-202ENST00000361545 ZBTB37Q5TC79 503 aa16.22■□□□□ 0.19
CLIP2-202ENST00000361545 TMUB1Q9BVT8 246 aa16.22■□□□□ 0.19
CLIP2-202ENST00000361545 NKX6-2Q9C056 277 aaPredicted RBP16.22■□□□□ 0.19
CLIP2-202ENST00000361545 DLL1O00548 723 aa16.22■□□□□ 0.19
CLIP2-202ENST00000361545 GDF9O60383 454 aa16.22■□□□□ 0.19
CLIP2-202ENST00000361545 ORM2P19652 201 aa16.22■□□□□ 0.19
CLIP2-202ENST00000361545 C19orf57Q0VDD7 668 aa16.22■□□□□ 0.19
CLIP2-202ENST00000361545 C2CD4CQ8TF44 421 aa16.22■□□□□ 0.19
CLIP2-202ENST00000361545 ASB13Q8WXK3 278 aa16.22■□□□□ 0.19
CLIP2-202ENST00000361545 CCL28Q9NRJ3 127 aa16.22■□□□□ 0.19
CLIP2-202ENST00000361545 CLCF1Q9UBD9 225 aa16.22■□□□□ 0.19
CLIP2-202ENST00000361545 SLC25A10Q9UBX3 287 aaPredicted RBP16.22■□□□□ 0.19
CLIP2-202ENST00000361545 ANKRD20A5PA0PJZ0 165 aa16.22■□□□□ 0.19
CLIP2-202ENST00000361545 ADAP1O75689 374 aa16.22■□□□□ 0.19
CLIP2-202ENST00000361545 H3F3AP84243 136 aa16.22■□□□□ 0.19
CLIP2-202ENST00000361545 FAM3AP98173 230 aa16.22■□□□□ 0.19
CLIP2-202ENST00000361545 KIAA0141Q14154 515 aaPredicted RBP16.22■□□□□ 0.19
CLIP2-202ENST00000361545 GAPTQ8N292 157 aa16.22■□□□□ 0.19
CLIP2-202ENST00000361545 ZNF680Q8NEM1 530 aa16.22■□□□□ 0.19
CLIP2-202ENST00000361545 VSTM2AQ8TAG5 236 aa16.22■□□□□ 0.19
CLIP2-202ENST00000361545 DHRS9Q9BPW9 319 aa16.22■□□□□ 0.19
CLIP2-202ENST00000361545 TMEM210A6NLX4 147 aa16.22■□□□□ 0.19
CLIP2-202ENST00000361545 LYZP61626 148 aa16.22■□□□□ 0.19
CLIP2-202ENST00000361545 SPICQ8N5J4 248 aa16.22■□□□□ 0.19
CLIP2-202ENST00000361545 TPRX1Q8N7U7 411 aa16.22■□□□□ 0.19
CLIP2-202ENST00000361545 PPP1R2P9O14990 202 aa16.21■□□□□ 0.19
CLIP2-202ENST00000361545 TXNDC12O95881 172 aa16.21■□□□□ 0.19
CLIP2-202ENST00000361545 RPL31P62899 125 aaKnown RBP16.21■□□□□ 0.19
CLIP2-202ENST00000361545 MED19A0JLT2 244 aaPredicted RBP16.21■□□□□ 0.19
CLIP2-202ENST00000361545 TTRP02766 147 aa16.21■□□□□ 0.19
CLIP2-202ENST00000361545 VSIG8P0DPA2 414 aa16.21■□□□□ 0.19
CLIP2-202ENST00000361545 NCR3LG1Q68D85 454 aa16.21■□□□□ 0.19
CLIP2-202ENST00000361545 ZNF574Q6ZN55 896 aaPredicted RBP16.21■□□□□ 0.19
CLIP2-202ENST00000361545 TMEM105Q8N8V8 129 aa16.21■□□□□ 0.19
CLIP2-202ENST00000361545 WDR90Q96KV7 1748 aa16.21■□□□□ 0.19
CLIP2-202ENST00000361545 CEP250Q9BV73 2442 aa16.21■□□□□ 0.19
CLIP2-202ENST00000361545 NTF3P20783 257 aa16.21■□□□□ 0.19
CLIP2-202ENST00000361545 REG1BP48304 166 aa16.21■□□□□ 0.19
CLIP2-202ENST00000361545 SPNS3Q6ZMD2 512 aa16.21■□□□□ 0.19
CLIP2-202ENST00000361545 ZBTB44Q8NCP5 570 aa16.21■□□□□ 0.19
CLIP2-202ENST00000361545 FDCSPQ8NFU4 85 aa16.21■□□□□ 0.19
CLIP2-202ENST00000361545 OR52L2PQ8NGH6 319 aa16.21■□□□□ 0.19
CLIP2-202ENST00000361545 CISD1Q9NZ45 108 aaKnown RBP16.21■□□□□ 0.19
CLIP2-202ENST00000361545 POLR2GP62487 172 aaKnown RBP eCLIP16.21■□□□□ 0.19
CLIP2-202ENST00000361545 MPV17LQ2QL34 196 aa16.21■□□□□ 0.19
CLIP2-202ENST00000361545 PDZD11Q5EBL8 140 aa16.21■□□□□ 0.19
CLIP2-202ENST00000361545 BCL2L2Q92843 193 aaPredicted RBP16.21■□□□□ 0.19
CLIP2-202ENST00000361545 RGPD3A6NKT7 1758 aaPredicted RBP16.21■□□□□ 0.18
CLIP2-202ENST00000361545 ZNF260Q3ZCT1 412 aa16.2■□□□□ 0.18
CLIP2-202ENST00000361545 RFLNBQ8N5W9 214 aa16.2■□□□□ 0.18
CLIP2-202ENST00000361545 RNF24Q9Y225 148 aa16.2■□□□□ 0.18
CLIP2-202ENST00000361545 POMT1Q9Y6A1 747 aa16.2■□□□□ 0.18
CLIP2-202ENST00000361545 GYPAP02724 150 aa16.2■□□□□ 0.18
CLIP2-202ENST00000361545 CTSSP25774 331 aa16.2■□□□□ 0.18
CLIP2-202ENST00000361545 COL10A1Q03692 680 aa16.2■□□□□ 0.18
CLIP2-202ENST00000361545 C1RLQ9NZP8 487 aa16.2■□□□□ 0.18
CLIP2-202ENST00000361545 CCL13Q99616 98 aa16.2■□□□□ 0.18
CLIP2-202ENST00000361545 LIPGQ9Y5X9 500 aa16.2■□□□□ 0.18
CLIP2-202ENST00000361545 SMIM10L1P0DMW3 83 aa16.2■□□□□ 0.18
CLIP2-202ENST00000361545 GAMTQ14353 236 aa16.2■□□□□ 0.18
CLIP2-202ENST00000361545 CLEC2AQ6UVW9 174 aa16.2■□□□□ 0.18
CLIP2-202ENST00000361545 WNT2BQ93097 391 aa16.2■□□□□ 0.18
CLIP2-202ENST00000361545 SMIM10Q96HG1 83 aa16.2■□□□□ 0.18
CLIP2-202ENST00000361545 GRAMD2BQ96HH9 432 aa16.2■□□□□ 0.18
CLIP2-202ENST00000361545 WFDC6Q9BQY6 131 aa16.2■□□□□ 0.18
CLIP2-202ENST00000361545 RYDENQ9NUL5 291 aaKnown RBP16.2■□□□□ 0.18
CLIP2-202ENST00000361545 CACNA1IQ9P0X4 2223 aa16.2■□□□□ 0.18
CLIP2-202ENST00000361545 PPYP01298 95 aa16.2■□□□□ 0.18
CLIP2-202ENST00000361545 SLC25A5P05141 298 aaKnown RBP16.2■□□□□ 0.18
CLIP2-202ENST00000361545 SMIM17P0DL12 118 aa16.2■□□□□ 0.18
CLIP2-202ENST00000361545 SPTBP11277 2137 aa16.2■□□□□ 0.18
CLIP2-202ENST00000361545 NANOS3P60323 173 aaKnown RBP16.2■□□□□ 0.18
CLIP2-202ENST00000361545 RHOBP62745 196 aa16.2■□□□□ 0.18
CLIP2-202ENST00000361545 ZNF788Q6ZQV5 615 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms